RNA–Protein interactions for RNA: ENST00000556020.1

GPHN-211, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-211ENST00000556020 HYDINQ4G0P3 5121 aa12.65□□□□□ -0.38
GPHN-211ENST00000556020 TRAV30A0A087WSZ9 112 aa12.64□□□□□ -0.39
GPHN-211ENST00000556020 CCDC160A6NGH7 325 aa12.64□□□□□ -0.39
GPHN-211ENST00000556020 P2RY1P47900 373 aa12.64□□□□□ -0.39
GPHN-211ENST00000556020 RBMS2Q15434 407 aaKnown RBP12.64□□□□□ -0.39
GPHN-211ENST00000556020 PYDC2Q56P42 97 aa12.64□□□□□ -0.39
GPHN-211ENST00000556020 PRSS54Q6PEW0 395 aa12.64□□□□□ -0.39
GPHN-211ENST00000556020 NARS2Q96I59 477 aaKnown RBP12.64□□□□□ -0.39
GPHN-211ENST00000556020 CA1P00915 261 aaPredicted RBP12.63□□□□□ -0.39
GPHN-211ENST00000556020 IFNA10P01566 189 aa12.63□□□□□ -0.39
GPHN-211ENST00000556020 SLC25A4P12235 298 aa12.63□□□□□ -0.39
GPHN-211ENST00000556020 NPY1RP25929 384 aa12.63□□□□□ -0.39
GPHN-211ENST00000556020 CRYBB3P26998 211 aa12.63□□□□□ -0.39
GPHN-211ENST00000556020 OR10J1P30954 320 aa12.63□□□□□ -0.39
GPHN-211ENST00000556020 LYZL2Q7Z4W2 148 aa12.63□□□□□ -0.39
GPHN-211ENST00000556020 TMED4Q7Z7H5 227 aa12.63□□□□□ -0.39
GPHN-211ENST00000556020 OR1S2Q8NGQ3 325 aa12.63□□□□□ -0.39
GPHN-211ENST00000556020 RNASEH2CQ8TDP1 164 aaKnown RBP12.63□□□□□ -0.39
GPHN-211ENST00000556020 Q8WTZ3 238 aa12.63□□□□□ -0.39
GPHN-211ENST00000556020 TMEM170AQ8WVE7 144 aa12.63□□□□□ -0.39
GPHN-211ENST00000556020 IL22RA2Q969J5 263 aa12.63□□□□□ -0.39
GPHN-211ENST00000556020 ACY3Q96HD9 319 aa12.63□□□□□ -0.39
GPHN-211ENST00000556020 GRAMD2BQ96HH9 432 aa12.63□□□□□ -0.39
GPHN-211ENST00000556020 RARRES2Q99969 163 aa12.63□□□□□ -0.39
GPHN-211ENST00000556020 SOSTQ9BQB4 213 aa12.63□□□□□ -0.39
GPHN-211ENST00000556020 NUPR2A6NF83 97 aa12.62□□□□□ -0.39
GPHN-211ENST00000556020 IGLC1P0CG04 106 aa12.62□□□□□ -0.39
GPHN-211ENST00000556020 SUPT4H1P63272 117 aaKnown RBP12.62□□□□□ -0.39
GPHN-211ENST00000556020 TMEM217Q8N7C4 229 aa12.62□□□□□ -0.39
GPHN-211ENST00000556020 TRAV2A0A0B4J234 112 aa12.61□□□□□ -0.39
GPHN-211ENST00000556020 A0A0B4J2A0 478 aa12.61□□□□□ -0.39
GPHN-211ENST00000556020 ZNF688P0C7X2 276 aa12.61□□□□□ -0.39
GPHN-211ENST00000556020 ANXA3P12429 323 aa12.61□□□□□ -0.39
GPHN-211ENST00000556020 FAUP35544 74 aaKnown RBP12.61□□□□□ -0.39
GPHN-211ENST00000556020 CCR6P51684 374 aa12.61□□□□□ -0.39
GPHN-211ENST00000556020 SMCO1Q147U7 214 aa12.61□□□□□ -0.39
GPHN-211ENST00000556020 ETFRF1Q6IPR1 90 aa12.61□□□□□ -0.39
GPHN-211ENST00000556020 STHQ8IWL8 128 aa12.61□□□□□ -0.39
GPHN-211ENST00000556020 LGI3Q8N145 548 aa12.61□□□□□ -0.39
GPHN-211ENST00000556020 OR11H2Q8NH07 326 aa12.61□□□□□ -0.39
GPHN-211ENST00000556020 OR1S1Q8NH92 325 aa12.61□□□□□ -0.39
GPHN-211ENST00000556020 DTD1Q8TEA8 209 aa12.61□□□□□ -0.39
GPHN-211ENST00000556020 NPIPB3Q92617 1050 aa12.61□□□□□ -0.39
GPHN-211ENST00000556020 RBKSQ9H477 322 aa12.61□□□□□ -0.39
GPHN-211ENST00000556020 SHPKQ9UHJ6 478 aa12.61□□□□□ -0.39
GPHN-211ENST00000556020 K7EQG2 157 aa12.6□□□□□ -0.39
GPHN-211ENST00000556020 LY6G6CO95867 125 aa12.6□□□□□ -0.39
GPHN-211ENST00000556020 IL4P05112 153 aa12.6□□□□□ -0.39
GPHN-211ENST00000556020 HNRNPCP07910 306 aaKnown RBP eCLIP12.6□□□□□ -0.393e-7■■□□□ 12.3
GPHN-211ENST00000556020 KLF9Q13886 244 aaPredicted RBP12.6□□□□□ -0.39
GPHN-211ENST00000556020 NMSQ5H8A3 153 aa12.6□□□□□ -0.39
GPHN-211ENST00000556020 CEMP1Q6PRD7 247 aaPredicted RBP12.6□□□□□ -0.39
GPHN-211ENST00000556020 NOXA1Q86UR1 476 aa12.6□□□□□ -0.39
GPHN-211ENST00000556020 TOMM5Q8N4H5 51 aa12.6□□□□□ -0.39
GPHN-211ENST00000556020 GATAD1Q8WUU5 269 aa12.6□□□□□ -0.39
GPHN-211ENST00000556020 CACFD1Q9UGQ2 172 aa12.6□□□□□ -0.39
GPHN-211ENST00000556020 AGRNO00468 2067 aa12.6□□□□□ -0.39
GPHN-211ENST00000556020 KNCNA6PVL3 124 aa12.59□□□□□ -0.39
GPHN-211ENST00000556020 DEFB4AO15263 64 aa12.59□□□□□ -0.39
GPHN-211ENST00000556020 YPEL3P61236 119 aaPredicted RBP12.59□□□□□ -0.39
GPHN-211ENST00000556020 SRPXP78539 464 aa12.59□□□□□ -0.39
GPHN-211ENST00000556020 DHRS2Q13268 280 aa12.59□□□□□ -0.39
GPHN-211ENST00000556020 USF2Q15853 346 aaPredicted RBP12.59□□□□□ -0.39
GPHN-211ENST00000556020 LINC00476Q8WZB0 136 aa12.59□□□□□ -0.39
GPHN-211ENST00000556020 TRIM63Q969Q1 353 aa12.59□□□□□ -0.39
GPHN-211ENST00000556020 HSPB7Q9UBY9 170 aa12.59□□□□□ -0.39
GPHN-211ENST00000556020 EPPK1P58107 5090 aaKnown RBP12.59□□□□□ -0.39
GPHN-211ENST00000556020 HELTA6NFD8 242 aa12.58□□□□□ -0.4
GPHN-211ENST00000556020 IFNA4P05014 189 aa12.58□□□□□ -0.4
GPHN-211ENST00000556020 VAMP1P23763 118 aa12.58□□□□□ -0.4
GPHN-211ENST00000556020 S100A5P33763 92 aa12.58□□□□□ -0.4
GPHN-211ENST00000556020 EIF2B2P49770 351 aaKnown RBP12.58□□□□□ -0.4
GPHN-211ENST00000556020 AP3S2P59780 193 aa12.58□□□□□ -0.4
GPHN-211ENST00000556020 U3KQ87 197 aa12.58□□□□□ -0.4
GPHN-211ENST00000556020 U3KQE9 123 aa12.58□□□□□ -0.4
GPHN-211ENST00000556020 V9GYH0 126 aa12.58□□□□□ -0.4
GPHN-211ENST00000556020 RD3LP0DJH9 198 aa12.57□□□□□ -0.4
GPHN-211ENST00000556020 ATF4P18848 351 aaPredicted RBP12.57□□□□□ -0.4
GPHN-211ENST00000556020 NANOS2P60321 138 aaKnown RBP12.57□□□□□ -0.4
GPHN-211ENST00000556020 ACTL10Q5JWF8 245 aa12.57□□□□□ -0.4
GPHN-211ENST00000556020 C16orf54Q6UWD8 224 aa12.57□□□□□ -0.4
GPHN-211ENST00000556020 DCANP1Q8TF63 244 aa12.57□□□□□ -0.4
GPHN-211ENST00000556020 PHLDA1Q8WV24 401 aaPredicted RBP12.57□□□□□ -0.4
GPHN-211ENST00000556020 GLMPQ8WWB7 406 aa12.57□□□□□ -0.4
GPHN-211ENST00000556020 FBXL17Q9UF56 701 aa12.57□□□□□ -0.4
GPHN-211ENST00000556020 PAIP2BQ9ULR5 123 aaKnown RBP12.57□□□□□ -0.4
GPHN-211ENST00000556020 KLK5Q9Y337 293 aaPredicted RBP12.57□□□□□ -0.4
GPHN-211ENST00000556020 TOMM40O96008 361 aa12.56□□□□□ -0.4
GPHN-211ENST00000556020 IAPPP10997 89 aa12.56□□□□□ -0.4
GPHN-211ENST00000556020 PSG1P11464 419 aa12.56□□□□□ -0.4
GPHN-211ENST00000556020 ZNF79Q15937 498 aa12.56□□□□□ -0.4
GPHN-211ENST00000556020 PSMG4Q5JS54 123 aa12.56□□□□□ -0.4
GPHN-211ENST00000556020 TRPT1Q86TN4 253 aaKnown RBP12.56□□□□□ -0.4
GPHN-211ENST00000556020 OR51G1Q8NGK1 321 aa12.56□□□□□ -0.4
GPHN-211ENST00000556020 PBDC1Q9BVG4 233 aa12.56□□□□□ -0.4
GPHN-211ENST00000556020 ZFP92A6NM28 416 aa12.55□□□□□ -0.4
GPHN-211ENST00000556020 AP2S1P53680 142 aaPredicted RBP12.55□□□□□ -0.4
GPHN-211ENST00000556020 TMEM128Q5BJH2 165 aa12.55□□□□□ -0.4
GPHN-211ENST00000556020 C11orf45Q8TAV5 145 aa12.55□□□□□ -0.4
GPHN-211ENST00000556020 SLC35E1Q96K37 410 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 420.8 ms