RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 OR4D10Q8NGI6 311 aa11.06□□□□□ -0.64
RAB5C-205ENST00000550013 OR52I2Q8NH67 350 aa11.06□□□□□ -0.64
RAB5C-205ENST00000550013 RRNAD1Q96FB5 475 aaKnown RBP11.06□□□□□ -0.64
RAB5C-205ENST00000550013 COPZ2Q9P299 210 aa11.06□□□□□ -0.64
RAB5C-205ENST00000550013 ABCA13Q86UQ4 5058 aa11.06□□□□□ -0.64
RAB5C-205ENST00000550013 RPS10-NUDT3A0A1W2PQS6 291 aa11.05□□□□□ -0.64
RAB5C-205ENST00000550013 PRSS29PA6NIE9 313 aa11.05□□□□□ -0.64
RAB5C-205ENST00000550013 FAM90A26D6RGX4 464 aa11.05□□□□□ -0.64
RAB5C-205ENST00000550013 H3BMM0 161 aa11.05□□□□□ -0.64
RAB5C-205ENST00000550013 P0DMU3 169 aa11.05□□□□□ -0.64
RAB5C-205ENST00000550013 FAM231AP0DMU4 169 aa11.05□□□□□ -0.64
RAB5C-205ENST00000550013 FAM231CP0DMU5 169 aa11.05□□□□□ -0.64
RAB5C-205ENST00000550013 OR10J1P30954 320 aa11.05□□□□□ -0.64
RAB5C-205ENST00000550013 SPCS3P61009 180 aa11.05□□□□□ -0.64
RAB5C-205ENST00000550013 VBP1P61758 197 aa11.05□□□□□ -0.64
RAB5C-205ENST00000550013 DHODHQ02127 395 aa11.05□□□□□ -0.64
RAB5C-205ENST00000550013 USF2Q15853 346 aaPredicted RBP11.05□□□□□ -0.64
RAB5C-205ENST00000550013 ARRDC1Q8N5I2 433 aa11.05□□□□□ -0.64
RAB5C-205ENST00000550013 OR1S2Q8NGQ3 325 aa11.05□□□□□ -0.64
RAB5C-205ENST00000550013 OR13C8Q8NGS7 320 aa11.05□□□□□ -0.64
RAB5C-205ENST00000550013 Q8WTZ3 238 aa11.05□□□□□ -0.64
RAB5C-205ENST00000550013 NDUFAF3Q9BU61 184 aa11.05□□□□□ -0.64
RAB5C-205ENST00000550013 FAM25AB3EWG3 89 aa11.04□□□□□ -0.64
RAB5C-205ENST00000550013 FAM25CB3EWG5 89 aa11.04□□□□□ -0.64
RAB5C-205ENST00000550013 FAM25GB3EWG6 89 aa11.04□□□□□ -0.64
RAB5C-205ENST00000550013 HTR2BP41595 481 aa11.04□□□□□ -0.64
RAB5C-205ENST00000550013 CCDC71LQ8N9Z2 235 aa11.04□□□□□ -0.64
RAB5C-205ENST00000550013 LHFPL5Q8TAF8 219 aa11.04□□□□□ -0.64
RAB5C-205ENST00000550013 MARCH1Q8TCQ1 289 aa11.04□□□□□ -0.64
RAB5C-205ENST00000550013 TMEM170AQ8WVE7 144 aa11.04□□□□□ -0.64
RAB5C-205ENST00000550013 C1QTNF4Q9BXJ3 329 aa11.04□□□□□ -0.64
RAB5C-205ENST00000550013 VCX3AQ9NNX9 186 aa11.04□□□□□ -0.64
RAB5C-205ENST00000550013 HEYLQ9NQ87 328 aaPredicted RBP11.04□□□□□ -0.64
RAB5C-205ENST00000550013 A0A087WXM4 84 aa11.03□□□□□ -0.64
RAB5C-205ENST00000550013 NXPH3O95157 252 aa11.03□□□□□ -0.64
RAB5C-205ENST00000550013 IL4P05112 153 aa11.03□□□□□ -0.64
RAB5C-205ENST00000550013 MED14OSP0DP75 135 aa11.03□□□□□ -0.64
RAB5C-205ENST00000550013 AP2S1P53680 142 aaPredicted RBP11.03□□□□□ -0.64
RAB5C-205ENST00000550013 DEFB1P60022 68 aa11.03□□□□□ -0.64
RAB5C-205ENST00000550013 YPEL3P61236 119 aaPredicted RBP11.03□□□□□ -0.64
RAB5C-205ENST00000550013 SNRPD3P62318 126 aaKnown RBP11.03□□□□□ -0.64
RAB5C-205ENST00000550013 SCGB2B2Q4G0G5 96 aa11.03□□□□□ -0.64
RAB5C-205ENST00000550013 AARDQ4LEZ3 155 aa11.03□□□□□ -0.64
RAB5C-205ENST00000550013 C2orf83Q53S99 150 aa11.03□□□□□ -0.64
RAB5C-205ENST00000550013 TERB2Q8NHR7 220 aa11.03□□□□□ -0.64
RAB5C-205ENST00000550013 ZFAND1Q8TCF1 268 aa11.03□□□□□ -0.64
RAB5C-205ENST00000550013 FUNDC2Q9BWH2 189 aa11.03□□□□□ -0.64
RAB5C-205ENST00000550013 NRN1Q9NPD7 142 aa11.03□□□□□ -0.64
RAB5C-205ENST00000550013 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.03□□□□□ -0.64
RAB5C-205ENST00000550013 OR5AC1P0C628 307 aa11.02□□□□□ -0.65
RAB5C-205ENST00000550013 SLC25A4P12235 298 aa11.02□□□□□ -0.65
RAB5C-205ENST00000550013 NPY1RP25929 384 aa11.02□□□□□ -0.65
RAB5C-205ENST00000550013 EMP1P54849 157 aa11.02□□□□□ -0.65
RAB5C-205ENST00000550013 FXYD7P58549 80 aa11.02□□□□□ -0.65
RAB5C-205ENST00000550013 NUTF2P61970 127 aaKnown RBP11.02□□□□□ -0.65
RAB5C-205ENST00000550013 GDF5OSQ5U4N7 250 aa11.02□□□□□ -0.65
RAB5C-205ENST00000550013 SIGLEC15Q6ZMC9 328 aa11.02□□□□□ -0.65
RAB5C-205ENST00000550013 SLC24A4Q8NFF2 622 aa11.02□□□□□ -0.65
RAB5C-205ENST00000550013 OR52E5Q8NH55 327 aa11.02□□□□□ -0.65
RAB5C-205ENST00000550013 RNASEH2CQ8TDP1 164 aaKnown RBP11.02□□□□□ -0.65
RAB5C-205ENST00000550013 NPIPB3Q92617 1050 aa11.02□□□□□ -0.65
RAB5C-205ENST00000550013 TMEM222Q9H0R3 208 aa11.02□□□□□ -0.65
RAB5C-205ENST00000550013 MTFP1Q9UDX5 166 aa11.02□□□□□ -0.65
RAB5C-205ENST00000550013 CACNG5Q9UF02 275 aa11.02□□□□□ -0.65
RAB5C-205ENST00000550013 CEBPZOSA8MTT3 80 aa11.01□□□□□ -0.65
RAB5C-205ENST00000550013 BUB3O43684 328 aa11.01□□□□□ -0.65
RAB5C-205ENST00000550013 CDS2O95674 445 aa11.01□□□□□ -0.65
RAB5C-205ENST00000550013 IGKV3-20P01619 116 aa11.01□□□□□ -0.65
RAB5C-205ENST00000550013 HLA-DRB4P13762 266 aa11.01□□□□□ -0.65
RAB5C-205ENST00000550013 TBPP20226 339 aa11.01□□□□□ -0.65
RAB5C-205ENST00000550013 MEF2DQ14814 521 aa11.01□□□□□ -0.65
RAB5C-205ENST00000550013 ZNF705AQ6ZN79 300 aaPredicted RBP11.01□□□□□ -0.65
RAB5C-205ENST00000550013 FAM219AQ8IW50 185 aa11.01□□□□□ -0.65
RAB5C-205ENST00000550013 SELENOHQ8IZQ5 122 aaKnown RBP11.01□□□□□ -0.65
RAB5C-205ENST00000550013 GLYATL2Q8WU03 294 aa11.01□□□□□ -0.65
RAB5C-205ENST00000550013 GPR146Q96CH1 333 aa11.01□□□□□ -0.65
RAB5C-205ENST00000550013 ACY3Q96HD9 319 aa11.01□□□□□ -0.65
RAB5C-205ENST00000550013 ABHD1Q96SE0 405 aa11.01□□□□□ -0.65
RAB5C-205ENST00000550013 SEPSECSQ9HD40 501 aaKnown RBP11.01□□□□□ -0.65
RAB5C-205ENST00000550013 EXTL2Q9UBQ6 330 aa11.01□□□□□ -0.65
RAB5C-205ENST00000550013 HLA-DRB4X5D2U9 266 aa11.01□□□□□ -0.65
RAB5C-205ENST00000550013 IGLV2-18A0A075B6J9 118 aa11□□□□□ -0.65
RAB5C-205ENST00000550013 IGHV3OR16-12A0A075B7B8 117 aa11□□□□□ -0.65
RAB5C-205ENST00000550013 ZNF705FA8MVS1 300 aaPredicted RBP11□□□□□ -0.65
RAB5C-205ENST00000550013 B3GALNT1O75752 331 aa11□□□□□ -0.65
RAB5C-205ENST00000550013 RAB3DO95716 219 aa11□□□□□ -0.65
RAB5C-205ENST00000550013 TOMM40O96008 361 aa11□□□□□ -0.65
RAB5C-205ENST00000550013 CD74P04233 296 aa11□□□□□ -0.65
RAB5C-205ENST00000550013 ZNF705DP0CH99 300 aaPredicted RBP11□□□□□ -0.65
RAB5C-205ENST00000550013 ZNF705BP0CI00 300 aaPredicted RBP11□□□□□ -0.65
RAB5C-205ENST00000550013 RORCP51449 518 aa11□□□□□ -0.65
RAB5C-205ENST00000550013 LGALS9BQ3B8N2 356 aa11□□□□□ -0.65
RAB5C-205ENST00000550013 FAAP20Q6NZ36 180 aa11□□□□□ -0.65
RAB5C-205ENST00000550013 MZT2AQ6P582 158 aa11□□□□□ -0.65
RAB5C-205ENST00000550013 TMEM229BQ8NBD8 167 aa11□□□□□ -0.65
RAB5C-205ENST00000550013 OR51G1Q8NGK1 321 aa11□□□□□ -0.65
RAB5C-205ENST00000550013 RBPMSQ93062 196 aaKnown RBP11□□□□□ -0.65
RAB5C-205ENST00000550013 NEU1Q99519 415 aa11□□□□□ -0.65
RAB5C-205ENST00000550013 RTBDNQ9BSG5 229 aaPredicted RBP11□□□□□ -0.65
RAB5C-205ENST00000550013 TEX13DA0A0J9YY54 714 aaPredicted RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 213.7 ms