RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 TLN2Q9Y4G6 2542 aa11.06□□□□□ -0.64
PRPF40B-209ENST00000548825 IGHV3-23P01764 117 aa11.06□□□□□ -0.64
PRPF40B-209ENST00000548825 FOXA3P55318 350 aaPredicted RBP11.06□□□□□ -0.64
PRPF40B-209ENST00000548825 SIGLECL1Q8N7X8 197 aa11.06□□□□□ -0.64
PRPF40B-209ENST00000548825 RPEQ96AT9 228 aa11.06□□□□□ -0.64
PRPF40B-209ENST00000548825 ZNF503Q96F45 646 aa11.06□□□□□ -0.64
PRPF40B-209ENST00000548825 SETD2Q9BYW2 2564 aaPredicted RBP11.05□□□□□ -0.64
PRPF40B-209ENST00000548825 DLL1O00548 723 aa11.05□□□□□ -0.64
PRPF40B-209ENST00000548825 CYB5R2Q6BCY4 276 aa11.05□□□□□ -0.64
PRPF40B-209ENST00000548825 GBGT1Q8N5D6 347 aa11.05□□□□□ -0.64
PRPF40B-209ENST00000548825 LINC00469Q8N7U9 141 aa11.05□□□□□ -0.64
PRPF40B-209ENST00000548825 RAB1CQ92928 201 aa11.05□□□□□ -0.64
PRPF40B-209ENST00000548825 ZNF331Q9NQX6 463 aaPredicted RBP11.05□□□□□ -0.64
PRPF40B-209ENST00000548825 A0A1W2PPI3 338 aa11.05□□□□□ -0.64
PRPF40B-209ENST00000548825 CORTO00230 105 aa11.05□□□□□ -0.64
PRPF40B-209ENST00000548825 ISLRO14498 428 aa11.05□□□□□ -0.64
PRPF40B-209ENST00000548825 CEACAM8P31997 349 aaPredicted RBP11.05□□□□□ -0.64
PRPF40B-209ENST00000548825 PRR20EP86478 221 aa11.05□□□□□ -0.64
PRPF40B-209ENST00000548825 PRR20CP86479 221 aa11.05□□□□□ -0.64
PRPF40B-209ENST00000548825 PRR20DP86480 221 aa11.05□□□□□ -0.64
PRPF40B-209ENST00000548825 PRR20BP86481 221 aa11.05□□□□□ -0.64
PRPF40B-209ENST00000548825 PRR20AP86496 221 aa11.05□□□□□ -0.64
PRPF40B-209ENST00000548825 OR5B3Q8NH48 314 aa11.05□□□□□ -0.64
PRPF40B-209ENST00000548825 PYGO2Q9BRQ0 406 aa11.05□□□□□ -0.64
PRPF40B-209ENST00000548825 WNT10AQ9GZT5 417 aa11.05□□□□□ -0.64
PRPF40B-209ENST00000548825 NAGKQ9UJ70 344 aa11.05□□□□□ -0.64
PRPF40B-209ENST00000548825 WASHC3Q9Y3C0 194 aa11.05□□□□□ -0.64
PRPF40B-209ENST00000548825 USF1P22415 310 aaPredicted RBP11.04□□□□□ -0.64
PRPF40B-209ENST00000548825 SPACA3Q8IXA5 215 aa11.04□□□□□ -0.64
PRPF40B-209ENST00000548825 C1orf174Q8IYL3 243 aa11.04□□□□□ -0.64
PRPF40B-209ENST00000548825 PNKDQ8N490 385 aa11.04□□□□□ -0.64
PRPF40B-209ENST00000548825 DSCAML1Q8TD84 2053 aa11.04□□□□□ -0.64
PRPF40B-209ENST00000548825 MUC21A0A0G2JKD1 596 aa11.04□□□□□ -0.64
PRPF40B-209ENST00000548825 MUC21A0A140T8X8 626 aa11.04□□□□□ -0.64
PRPF40B-209ENST00000548825 M0QZ24 198 aa11.04□□□□□ -0.64
PRPF40B-209ENST00000548825 CEACAM4O75871 244 aa11.04□□□□□ -0.64
PRPF40B-209ENST00000548825 SUB1P53999 127 aaKnown RBP eCLIP11.04□□□□□ -0.64
PRPF40B-209ENST00000548825 MUC21Q5SSG8 566 aa11.04□□□□□ -0.64
PRPF40B-209ENST00000548825 PRSS33Q8NF86 280 aa11.04□□□□□ -0.64
PRPF40B-209ENST00000548825 DIRC2Q96SL1 478 aa11.04□□□□□ -0.64
PRPF40B-209ENST00000548825 EREGO14944 169 aa11.04□□□□□ -0.64
PRPF40B-209ENST00000548825 CD3EP07766 207 aa11.04□□□□□ -0.64
PRPF40B-209ENST00000548825 GATA4P43694 442 aa11.04□□□□□ -0.64
PRPF40B-209ENST00000548825 RPL15P61313 204 aaKnown RBP11.04□□□□□ -0.64
PRPF40B-209ENST00000548825 LCN2P80188 198 aa11.04□□□□□ -0.64
PRPF40B-209ENST00000548825 MMDQ15546 238 aa11.04□□□□□ -0.64
PRPF40B-209ENST00000548825 A0A1W2PN81 502 aa11.03□□□□□ -0.64
PRPF40B-209ENST00000548825 TCF24Q7RTU0 167 aa11.03□□□□□ -0.64
PRPF40B-209ENST00000548825 DMRTC2Q8IXT2 367 aaPredicted RBP11.03□□□□□ -0.64
PRPF40B-209ENST00000548825 OSR1Q8TAX0 266 aaPredicted RBP11.03□□□□□ -0.64
PRPF40B-209ENST00000548825 C22orf15Q8WYQ4 148 aa11.03□□□□□ -0.64
PRPF40B-209ENST00000548825 GNB4Q9HAV0 340 aa11.03□□□□□ -0.64
PRPF40B-209ENST00000548825 PTPRBP23467 1997 aa11.03□□□□□ -0.64
PRPF40B-209ENST00000548825 LOXP28300 417 aaPredicted RBP11.03□□□□□ -0.64
PRPF40B-209ENST00000548825 TPPP2P59282 170 aa11.03□□□□□ -0.64
PRPF40B-209ENST00000548825 KLRD1Q13241 179 aa11.03□□□□□ -0.64
PRPF40B-209ENST00000548825 PDPNQ86YL7 162 aa11.03□□□□□ -0.64
PRPF40B-209ENST00000548825 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.03□□□□□ -0.64
PRPF40B-209ENST00000548825 RCHY1Q96PM5 261 aa11.03□□□□□ -0.64
PRPF40B-209ENST00000548825 LPAR2Q9HBW0 351 aa11.03□□□□□ -0.64
PRPF40B-209ENST00000548825 NCBP2LA6PVI3 153 aaKnown RBP11.02□□□□□ -0.64
PRPF40B-209ENST00000548825 CCL21O00585 134 aa11.02□□□□□ -0.64
PRPF40B-209ENST00000548825 GATCO43716 136 aaKnown RBP11.02□□□□□ -0.64
PRPF40B-209ENST00000548825 CSN3P07498 182 aa11.02□□□□□ -0.64
PRPF40B-209ENST00000548825 RPL27AP46776 148 aaKnown RBP11.02□□□□□ -0.64
PRPF40B-209ENST00000548825 PMCHL1Q16048 86 aa11.02□□□□□ -0.64
PRPF40B-209ENST00000548825 RNASEKQ6P5S7 137 aaKnown RBP11.02□□□□□ -0.64
PRPF40B-209ENST00000548825 IGFL3Q6UXB1 125 aa11.02□□□□□ -0.65
PRPF40B-209ENST00000548825 MUC15Q8N387 334 aa11.02□□□□□ -0.65
PRPF40B-209ENST00000548825 Q8NA96 180 aa11.02□□□□□ -0.65
PRPF40B-209ENST00000548825 NGBQ9NPG2 151 aa11.02□□□□□ -0.65
PRPF40B-209ENST00000548825 TMSB15BA0A087X1C1 80 aa11.02□□□□□ -0.65
PRPF40B-209ENST00000548825 FAM90A9PA6NNJ1 464 aa11.02□□□□□ -0.65
PRPF40B-209ENST00000548825 PPOXP50336 477 aa11.02□□□□□ -0.65
PRPF40B-209ENST00000548825 TCTAP57738 103 aa11.02□□□□□ -0.65
PRPF40B-209ENST00000548825 BPIFB3P59826 476 aa11.02□□□□□ -0.65
PRPF40B-209ENST00000548825 FOXL1Q12952 345 aa11.02□□□□□ -0.65
PRPF40B-209ENST00000548825 ASCL5Q7RTU5 278 aa11.02□□□□□ -0.65
PRPF40B-209ENST00000548825 REC114Q7Z4M0 266 aa11.02□□□□□ -0.65
PRPF40B-209ENST00000548825 FAM222BQ8WU58 562 aa11.02□□□□□ -0.65
PRPF40B-209ENST00000548825 NDUFA4L2Q9NRX3 87 aa11.02□□□□□ -0.65
PRPF40B-209ENST00000548825 CUBNO60494 3623 aa11.02□□□□□ -0.65
PRPF40B-209ENST00000548825 IGHV1-8P0DP01 117 aa11.01□□□□□ -0.65
PRPF40B-209ENST00000548825 BET1LQ9NYM9 111 aa11.01□□□□□ -0.65
PRPF40B-209ENST00000548825 V9GYV3 84 aa11.01□□□□□ -0.65
PRPF40B-209ENST00000548825 PPIAL4CA0A0B4J2A2 164 aa11.01□□□□□ -0.65
PRPF40B-209ENST00000548825 PPIAL4GP0DN37 164 aa11.01□□□□□ -0.65
PRPF40B-209ENST00000548825 Q6ZWC4 215 aa11.01□□□□□ -0.65
PRPF40B-209ENST00000548825 FAM169BQ8N8A8 192 aa11.01□□□□□ -0.65
PRPF40B-209ENST00000548825 VSTM2AQ8TAG5 236 aa11.01□□□□□ -0.65
PRPF40B-209ENST00000548825 SLC25A2Q9BXI2 301 aa11.01□□□□□ -0.65
PRPF40B-209ENST00000548825 C2orf83Q53S99 150 aa11.01□□□□□ -0.65
PRPF40B-209ENST00000548825 LCN12Q6JVE5 192 aa11.01□□□□□ -0.65
PRPF40B-209ENST00000548825 EXOC3-AS1Q8N2X6 119 aa11.01□□□□□ -0.65
PRPF40B-209ENST00000548825 TBL2Q9Y4P3 447 aaKnown RBP11.01□□□□□ -0.65
PRPF40B-209ENST00000548825 TMPRSS3P57727 454 aa11□□□□□ -0.65
PRPF40B-209ENST00000548825 CR1LQ2VPA4 569 aa11□□□□□ -0.65
PRPF40B-209ENST00000548825 PATE2Q6UY27 113 aa11□□□□□ -0.65
PRPF40B-209ENST00000548825 DAZAP1Q96EP5 407 aaKnown RBP11□□□□□ -0.65
PRPF40B-209ENST00000548825 PGLYRP4Q96LB8 373 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms