RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 CBLN4Q9NTU7 201 aa14.81□□□□□ -0.04
PRPF40B-208ENST00000548436 AMMECR1Q9Y4X0 333 aaPredicted RBP14.81□□□□□ -0.04
PRPF40B-208ENST00000548436 V9GYV3 84 aa14.81□□□□□ -0.04
PRPF40B-208ENST00000548436 IGHV3-21A0A0B4J1V1 117 aa14.81□□□□□ -0.04
PRPF40B-208ENST00000548436 BPIFB3P59826 476 aa14.81□□□□□ -0.04
PRPF40B-208ENST00000548436 C11orf71Q6IPW1 123 aa14.81□□□□□ -0.04
PRPF40B-208ENST00000548436 MRPL41Q8IXM3 137 aaKnown RBP14.81□□□□□ -0.04
PRPF40B-208ENST00000548436 PAXXQ9BUH6 204 aa14.81□□□□□ -0.04
PRPF40B-208ENST00000548436 TNFRSF19Q9NS68 423 aa14.81□□□□□ -0.04
PRPF40B-208ENST00000548436 FCN1O00602 326 aa14.8□□□□□ -0.04
PRPF40B-208ENST00000548436 IGLV2-8P01709 118 aa14.8□□□□□ -0.04
PRPF40B-208ENST00000548436 LINC00305Q7Z4B0 112 aa14.8□□□□□ -0.04
PRPF40B-208ENST00000548436 DMRT1Q9Y5R6 373 aa14.8□□□□□ -0.04
PRPF40B-208ENST00000548436 CNN1P51911 297 aaKnown RBP14.8□□□□□ -0.04
PRPF40B-208ENST00000548436 ARF6P62330 175 aa14.8□□□□□ -0.04
PRPF40B-208ENST00000548436 IGF2BP2-AS1Q96M15 143 aa14.8□□□□□ -0.04
PRPF40B-208ENST00000548436 TMEM116Q8NCL8 245 aa14.79□□□□□ -0.04
PRPF40B-208ENST00000548436 FXYD5Q96DB9 178 aa14.79□□□□□ -0.04
PRPF40B-208ENST00000548436 TRGV9Q99603 122 aa14.79□□□□□ -0.04
PRPF40B-208ENST00000548436 RNASE7Q9H1E1 156 aaKnown RBP14.79□□□□□ -0.04
PRPF40B-208ENST00000548436 TMEM8BA6NDV4 472 aa14.78□□□□□ -0.04
PRPF40B-208ENST00000548436 TIMM23O14925 209 aa14.78□□□□□ -0.04
PRPF40B-208ENST00000548436 SNRPCP09234 159 aaKnown RBP14.78□□□□□ -0.04
PRPF40B-208ENST00000548436 ORM2P19652 201 aa14.78□□□□□ -0.04
PRPF40B-208ENST00000548436 YPEL3P61236 119 aaPredicted RBP14.78□□□□□ -0.04
PRPF40B-208ENST00000548436 TIGITQ495A1 244 aa14.78□□□□□ -0.04
PRPF40B-208ENST00000548436 LHFPL4Q7Z7J7 247 aa14.78□□□□□ -0.04
PRPF40B-208ENST00000548436 LINC00479Q96M42 142 aa14.78□□□□□ -0.04
PRPF40B-208ENST00000548436 F11RQ9Y624 299 aaKnown RBP14.78□□□□□ -0.04
PRPF40B-208ENST00000548436 ABCA1O95477 2261 aa14.78□□□□□ -0.04
PRPF40B-208ENST00000548436 GCGP01275 180 aa14.78□□□□□ -0.04
PRPF40B-208ENST00000548436 RPEL1Q2QD12 228 aa14.78□□□□□ -0.04
PRPF40B-208ENST00000548436 TPTE2P1Q5T6R2 138 aa14.78□□□□□ -0.04
PRPF40B-208ENST00000548436 OR1B1Q8NGR6 318 aa14.78□□□□□ -0.04
PRPF40B-208ENST00000548436 IGFBPL1Q8WX77 278 aa14.78□□□□□ -0.04
PRPF40B-208ENST00000548436 SRSF12Q8WXF0 261 aaKnown RBP14.78□□□□□ -0.04
PRPF40B-208ENST00000548436 TIMD4Q96H15 378 aa14.78□□□□□ -0.04
PRPF40B-208ENST00000548436 TRAV9-1A0A075B6T8 112 aa14.77□□□□□ -0.04
PRPF40B-208ENST00000548436 RD3LP0DJH9 198 aa14.77□□□□□ -0.04
PRPF40B-208ENST00000548436 ADMP35318 185 aa14.77□□□□□ -0.04
PRPF40B-208ENST00000548436 ZNF329Q86UD4 541 aa14.77□□□□□ -0.04
PRPF40B-208ENST00000548436 GSX1Q9H4S2 264 aaPredicted RBP14.77□□□□□ -0.04
PRPF40B-208ENST00000548436 FRMD6-AS1P0C7T7 363 aa14.77□□□□□ -0.05
PRPF40B-208ENST00000548436 HIST1H1BP16401 226 aaKnown RBP14.77□□□□□ -0.05
PRPF40B-208ENST00000548436 CBLN1P23435 193 aa14.77□□□□□ -0.05
PRPF40B-208ENST00000548436 OR11H6Q8NGC7 330 aa14.77□□□□□ -0.05
PRPF40B-208ENST00000548436 RNF5Q99942 180 aa14.77□□□□□ -0.05
PRPF40B-208ENST00000548436 PRDM13Q9H4Q3 707 aa14.77□□□□□ -0.05
PRPF40B-208ENST00000548436 CORTO00230 105 aa14.76□□□□□ -0.05
PRPF40B-208ENST00000548436 HTR1DP28221 377 aa14.76□□□□□ -0.05
PRPF40B-208ENST00000548436 PAX2Q02962 417 aa14.76□□□□□ -0.05
PRPF40B-208ENST00000548436 KLRD1Q13241 179 aa14.76□□□□□ -0.05
PRPF40B-208ENST00000548436 FXYD3Q14802 87 aa14.76□□□□□ -0.05
PRPF40B-208ENST00000548436 PLGLAQ15195 96 aa14.76□□□□□ -0.05
PRPF40B-208ENST00000548436 C22orf15Q8WYQ4 148 aa14.76□□□□□ -0.05
PRPF40B-208ENST00000548436 OSTCQ9NRP0 149 aa14.76□□□□□ -0.05
PRPF40B-208ENST00000548436 HILPDAQ9Y5L2 63 aa14.76□□□□□ -0.05
PRPF40B-208ENST00000548436 A0A1B0GUS0 222 aa14.75□□□□□ -0.05
PRPF40B-208ENST00000548436 OR8I2Q8N0Y5 310 aa14.75□□□□□ -0.05
PRPF40B-208ENST00000548436 NHLRC2Q8NBF2 726 aa14.75□□□□□ -0.05
PRPF40B-208ENST00000548436 NEU4Q8WWR8 484 aaPredicted RBP14.75□□□□□ -0.05
PRPF40B-208ENST00000548436 PERPQ96FX8 193 aa14.75□□□□□ -0.05
PRPF40B-208ENST00000548436 SSBP3Q9BWW4 388 aaPredicted RBP14.75□□□□□ -0.05
PRPF40B-208ENST00000548436 CDC42EP3Q9UKI2 254 aa14.75□□□□□ -0.05
PRPF40B-208ENST00000548436 HIVEP3Q5T1R4 2406 aa14.75□□□□□ -0.05
PRPF40B-208ENST00000548436 SPTBN1Q01082 2364 aaKnown RBP14.75□□□□□ -0.05
PRPF40B-208ENST00000548436 MGST1P10620 155 aaKnown RBP14.75□□□□□ -0.05
PRPF40B-208ENST00000548436 LY6DQ14210 128 aa14.75□□□□□ -0.05
PRPF40B-208ENST00000548436 DPM3Q9P2X0 92 aa14.75□□□□□ -0.05
PRPF40B-208ENST00000548436 LOC105371242A0A075B767 164 aa14.74□□□□□ -0.05
PRPF40B-208ENST00000548436 A0A1W2PPR1 153 aa14.74□□□□□ -0.05
PRPF40B-208ENST00000548436 ISLRO14498 428 aa14.74□□□□□ -0.05
PRPF40B-208ENST00000548436 TAS2R60P59551 318 aa14.74□□□□□ -0.05
PRPF40B-208ENST00000548436 DNLZQ5SXM8 178 aa14.74□□□□□ -0.05
PRPF40B-208ENST00000548436 OR1L6Q8NGR2 347 aa14.74□□□□□ -0.05
PRPF40B-208ENST00000548436 CFHR4Q92496 578 aa14.74□□□□□ -0.05
PRPF40B-208ENST00000548436 PEX7O00628 323 aa14.73□□□□□ -0.05
PRPF40B-208ENST00000548436 CD24P25063 80 aa14.73□□□□□ -0.05
PRPF40B-208ENST00000548436 MYCNOSP40205 109 aa14.73□□□□□ -0.05
PRPF40B-208ENST00000548436 MMDQ15546 238 aa14.73□□□□□ -0.05
PRPF40B-208ENST00000548436 FBLN7Q53RD9 439 aa14.73□□□□□ -0.05
PRPF40B-208ENST00000548436 TRAV34A0A0B4J273 112 aa14.73□□□□□ -0.05
PRPF40B-208ENST00000548436 I3L2K1 104 aa14.73□□□□□ -0.05
PRPF40B-208ENST00000548436 M0R1W7 72 aa14.73□□□□□ -0.05
PRPF40B-208ENST00000548436 HYPMO75409 117 aa14.73□□□□□ -0.05
PRPF40B-208ENST00000548436 RANP62826 216 aaKnown RBP14.73□□□□□ -0.05
PRPF40B-208ENST00000548436 JOSD1Q15040 202 aaPredicted RBP14.73□□□□□ -0.05
PRPF40B-208ENST00000548436 IBA57Q5T440 356 aaKnown RBP14.73□□□□□ -0.05
PRPF40B-208ENST00000548436 ASPHD1Q5U4P2 390 aa14.73□□□□□ -0.05
PRPF40B-208ENST00000548436 TMEM256Q8N2U0 113 aa14.73□□□□□ -0.05
PRPF40B-208ENST00000548436 GBGT1Q8N5D6 347 aa14.73□□□□□ -0.05
PRPF40B-208ENST00000548436 BLNKQ8WV28 456 aa14.73□□□□□ -0.05
PRPF40B-208ENST00000548436 WNT10AQ9GZT5 417 aa14.73□□□□□ -0.05
PRPF40B-208ENST00000548436 ODF3BA8MYP8 253 aa14.72□□□□□ -0.05
PRPF40B-208ENST00000548436 CNIH1O95406 144 aa14.72□□□□□ -0.05
PRPF40B-208ENST00000548436 GZMBP10144 247 aa14.72□□□□□ -0.05
PRPF40B-208ENST00000548436 IER3P46695 156 aa14.72□□□□□ -0.05
PRPF40B-208ENST00000548436 GNG5P63218 68 aa14.72□□□□□ -0.05
PRPF40B-208ENST00000548436 DTX2Q86UW9 622 aa14.72□□□□□ -0.05
PRPF40B-208ENST00000548436 MRPL18Q9H0U6 180 aaKnown RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms