RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 NOTCH3Q9UM47 2321 aa8.23□□□□□ -1.09
NPIPB3-210ENST00000542817 IGSF23A1L1A6 192 aa8.23□□□□□ -1.09
NPIPB3-210ENST00000542817 FAM223BA6NKX1 122 aa8.23□□□□□ -1.09
NPIPB3-210ENST00000542817 IGHV3-23P01764 117 aa8.23□□□□□ -1.09
NPIPB3-210ENST00000542817 DEFA4P12838 97 aa8.23□□□□□ -1.09
NPIPB3-210ENST00000542817 SNCAP37840 140 aa8.23□□□□□ -1.09
NPIPB3-210ENST00000542817 LRRC37A5PQ49AS3 106 aa8.23□□□□□ -1.09
NPIPB3-210ENST00000542817 SPANXN5Q5MJ07 72 aa8.23□□□□□ -1.09
NPIPB3-210ENST00000542817 C12orf54Q6X4T0 127 aa8.23□□□□□ -1.09
NPIPB3-210ENST00000542817 NDUFA11Q86Y39 141 aa8.23□□□□□ -1.09
NPIPB3-210ENST00000542817 FAM223AQ8IWN6 122 aa8.23□□□□□ -1.09
NPIPB3-210ENST00000542817 SFT2D1Q8WV19 159 aa8.23□□□□□ -1.09
NPIPB3-210ENST00000542817 SAT2Q96F10 170 aaPredicted RBP8.23□□□□□ -1.09
NPIPB3-210ENST00000542817 BSCL2Q96G97 398 aaPredicted RBP8.23□□□□□ -1.09
NPIPB3-210ENST00000542817 RAX2Q96IS3 184 aa8.23□□□□□ -1.09
NPIPB3-210ENST00000542817 USMG5Q96IX5 58 aa8.23□□□□□ -1.09
NPIPB3-210ENST00000542817 CIB3Q96Q77 187 aaPredicted RBP8.23□□□□□ -1.09
NPIPB3-210ENST00000542817 OR5B12Q96R08 314 aa8.23□□□□□ -1.09
NPIPB3-210ENST00000542817 HIPK2Q9H2X6 1198 aa8.23□□□□□ -1.09
NPIPB3-210ENST00000542817 TUBA4BQ9H853 241 aa8.23□□□□□ -1.09
NPIPB3-210ENST00000542817 ENY2Q9NPA8 101 aa8.23□□□□□ -1.09
NPIPB3-210ENST00000542817 LYRM2Q9NU23 88 aaPredicted RBP8.23□□□□□ -1.09
NPIPB3-210ENST00000542817 PSENENQ9NZ42 101 aa8.23□□□□□ -1.09
NPIPB3-210ENST00000542817 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.22□□□□□ -1.09
NPIPB3-210ENST00000542817 A0A1W2PRX2 142 aa8.22□□□□□ -1.09
NPIPB3-210ENST00000542817 FAM24AA6NFZ4 105 aa8.22□□□□□ -1.09
NPIPB3-210ENST00000542817 IFNA10P01566 189 aa8.22□□□□□ -1.09
NPIPB3-210ENST00000542817 S100A9P06702 114 aaKnown RBP8.22□□□□□ -1.09
NPIPB3-210ENST00000542817 LGALS1P09382 135 aaKnown RBP8.22□□□□□ -1.09
NPIPB3-210ENST00000542817 S100PP25815 95 aa8.22□□□□□ -1.09
NPIPB3-210ENST00000542817 FCGR2BP31994 310 aaPredicted RBP8.22□□□□□ -1.09
NPIPB3-210ENST00000542817 ADMP35318 185 aa8.22□□□□□ -1.09
NPIPB3-210ENST00000542817 ATP5IP56385 69 aaPredicted RBP8.22□□□□□ -1.09
NPIPB3-210ENST00000542817 S100A10P60903 97 aa8.22□□□□□ -1.09
NPIPB3-210ENST00000542817 ATP5G2Q06055 141 aa8.22□□□□□ -1.09
NPIPB3-210ENST00000542817 FHL3Q13643 280 aa8.22□□□□□ -1.09
NPIPB3-210ENST00000542817 DEFB136Q30KP8 78 aa8.22□□□□□ -1.09
NPIPB3-210ENST00000542817 PRSS54Q6PEW0 395 aa8.22□□□□□ -1.09
NPIPB3-210ENST00000542817 C8orf86Q6ZUL3 223 aa8.22□□□□□ -1.09
NPIPB3-210ENST00000542817 MRPL41Q8IXM3 137 aaKnown RBP8.22□□□□□ -1.09
NPIPB3-210ENST00000542817 C3orf56Q8N813 242 aa8.22□□□□□ -1.09
NPIPB3-210ENST00000542817 OR1L6Q8NGR2 347 aa8.22□□□□□ -1.09
NPIPB3-210ENST00000542817 RNASEH2CQ8TDP1 164 aaKnown RBP8.22□□□□□ -1.09
NPIPB3-210ENST00000542817 VN1R17PQ8TDU5 208 aa8.22□□□□□ -1.09
NPIPB3-210ENST00000542817 C4orf3Q8WVX3 66 aa8.22□□□□□ -1.09
NPIPB3-210ENST00000542817 MISP3Q96FF7 219 aa8.22□□□□□ -1.09
NPIPB3-210ENST00000542817 DUX3Q96PT4 197 aa8.22□□□□□ -1.09
NPIPB3-210ENST00000542817 BMPR1BO00238 502 aa8.21□□□□□ -1.1
NPIPB3-210ENST00000542817 UBE2CO00762 179 aa8.21□□□□□ -1.1
NPIPB3-210ENST00000542817 METTL15P1P0C7V9 234 aa8.21□□□□□ -1.1
NPIPB3-210ENST00000542817 RPL35P42766 123 aaKnown RBP8.21□□□□□ -1.1
NPIPB3-210ENST00000542817 AKR1D1P51857 326 aa8.21□□□□□ -1.1
NPIPB3-210ENST00000542817 RAB5BP61020 215 aa8.21□□□□□ -1.1
NPIPB3-210ENST00000542817 CD69Q07108 199 aa8.21□□□□□ -1.1
NPIPB3-210ENST00000542817 NSUN5P1Q3KNT7 163 aa8.21□□□□□ -1.1
NPIPB3-210ENST00000542817 SHISA2Q6UWI4 295 aa8.21□□□□□ -1.1
NPIPB3-210ENST00000542817 TMEM252Q8N6L7 170 aa8.21□□□□□ -1.1
NPIPB3-210ENST00000542817 C15orf54Q8N8G6 183 aa8.21□□□□□ -1.1
NPIPB3-210ENST00000542817 KLHL30-AS1Q8NEE0 82 aa8.21□□□□□ -1.1
NPIPB3-210ENST00000542817 RNF141Q8WVD5 230 aa8.21□□□□□ -1.1
NPIPB3-210ENST00000542817 OR51M1Q9H341 326 aa8.21□□□□□ -1.1
NPIPB3-210ENST00000542817 STRAPQ9Y3F4 350 aaKnown RBP8.21□□□□□ -1.1
NPIPB3-210ENST00000542817 NOTCH1P46531 2555 aa8.2□□□□□ -1.1
NPIPB3-210ENST00000542817 IGKV1D-37A0A075B6S9 117 aa8.2□□□□□ -1.1
NPIPB3-210ENST00000542817 IGHV4OR15-8A0A075B7B6 117 aa8.2□□□□□ -1.1
NPIPB3-210ENST00000542817 IGKV1OR2-108A0A075B7D4 117 aa8.2□□□□□ -1.1
NPIPB3-210ENST00000542817 A0A087WW49 117 aa8.2□□□□□ -1.1
NPIPB3-210ENST00000542817 A0A0G2JLM5 398 aa8.2□□□□□ -1.1
NPIPB3-210ENST00000542817 C5orf52A6NGY3 159 aa8.2□□□□□ -1.1
NPIPB3-210ENST00000542817 PPP5D1E7EU14 171 aa8.2□□□□□ -1.1
NPIPB3-210ENST00000542817 LY86O95711 162 aa8.2□□□□□ -1.1
NPIPB3-210ENST00000542817 CTSGP08311 255 aa8.2□□□□□ -1.1
NPIPB3-210ENST00000542817 GPX4P36969 197 aaPredicted RBP8.2□□□□□ -1.1
NPIPB3-210ENST00000542817 SUB1P53999 127 aaKnown RBP eCLIP8.2□□□□□ -1.1
NPIPB3-210ENST00000542817 SSTP61278 116 aa8.2□□□□□ -1.1
NPIPB3-210ENST00000542817 EIF5AP63241 154 aaKnown RBP8.2□□□□□ -1.1
NPIPB3-210ENST00000542817 GAMTQ14353 236 aa8.2□□□□□ -1.1
NPIPB3-210ENST00000542817 TMEM116Q8NCL8 245 aa8.2□□□□□ -1.1
NPIPB3-210ENST00000542817 THAP6Q8TBB0 222 aa8.2□□□□□ -1.1
NPIPB3-210ENST00000542817 PINX1Q96BK5 328 aaKnown RBP8.2□□□□□ -1.1
NPIPB3-210ENST00000542817 CHRDL1Q9BU40 450 aa8.2□□□□□ -1.1
NPIPB3-210ENST00000542817 C21orf62Q9NYP8 219 aa8.2□□□□□ -1.1
NPIPB3-210ENST00000542817 TRBV7-1A0A0A6YYK4 115 aa8.19□□□□□ -1.1
NPIPB3-210ENST00000542817 E5RGE8 158 aa8.19□□□□□ -1.1
NPIPB3-210ENST00000542817 CORTO00230 105 aa8.19□□□□□ -1.1
NPIPB3-210ENST00000542817 CST7O76096 145 aa8.19□□□□□ -1.1
NPIPB3-210ENST00000542817 TSPAN15O95858 294 aa8.19□□□□□ -1.1
NPIPB3-210ENST00000542817 IGKV1-17P01599 117 aa8.19□□□□□ -1.1
NPIPB3-210ENST00000542817 CLEC3BP05452 202 aa8.19□□□□□ -1.1
NPIPB3-210ENST00000542817 TPT1P13693 172 aaKnown RBP8.19□□□□□ -1.1
NPIPB3-210ENST00000542817 P2RY1P47900 373 aa8.19□□□□□ -1.1
NPIPB3-210ENST00000542817 NHLH2Q02577 135 aa8.19□□□□□ -1.1
NPIPB3-210ENST00000542817 KHDC1LQ5JSQ8 128 aa8.19□□□□□ -1.1
NPIPB3-210ENST00000542817 CLEC19AQ6UXS0 136 aa8.19□□□□□ -1.1
NPIPB3-210ENST00000542817 ZNF600Q6ZNG1 722 aa8.19□□□□□ -1.1
NPIPB3-210ENST00000542817 SLC16A13Q7RTY0 426 aa8.19□□□□□ -1.1
NPIPB3-210ENST00000542817 OR1S2Q8NGQ3 325 aa8.19□□□□□ -1.1
NPIPB3-210ENST00000542817 OR4X1Q8NH49 305 aa8.19□□□□□ -1.1
NPIPB3-210ENST00000542817 EEF1AKMT3Q96AZ1 226 aa8.19□□□□□ -1.1
NPIPB3-210ENST00000542817 ATP6V0BQ99437 205 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms