RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 GAGE12BA1L429 117 aa4.33□□□□□ -1.72
PROM1-220ENST00000540805 CGB1A6NKQ9 187 aa4.33□□□□□ -1.72
PROM1-220ENST00000540805 CHEK1O14757 476 aa4.33□□□□□ -1.72
PROM1-220ENST00000540805 ZNF253O75346 499 aa4.33□□□□□ -1.72
PROM1-220ENST00000540805 TOMM40O96008 361 aa4.33□□□□□ -1.72
PROM1-220ENST00000540805 IGKV3-15P01624 115 aa4.33□□□□□ -1.72
PROM1-220ENST00000540805 GPX1P07203 203 aa4.33□□□□□ -1.72
PROM1-220ENST00000540805 TSPOP30536 169 aa4.33□□□□□ -1.72
PROM1-220ENST00000540805 NTF4P34130 210 aa4.33□□□□□ -1.72
PROM1-220ENST00000540805 G6PCP35575 357 aa4.33□□□□□ -1.72
PROM1-220ENST00000540805 IGFBP7Q16270 282 aa4.33□□□□□ -1.72
PROM1-220ENST00000540805 VWC2Q2TAL6 325 aa4.33□□□□□ -1.72
PROM1-220ENST00000540805 TMEM249Q2WGJ8 235 aa4.33□□□□□ -1.72
PROM1-220ENST00000540805 SPATA12Q7Z6I5 190 aa4.33□□□□□ -1.72
PROM1-220ENST00000540805 KIR3DL3Q8N743 410 aa4.33□□□□□ -1.72
PROM1-220ENST00000540805 KLHDC1Q8N7A1 406 aa4.33□□□□□ -1.72
PROM1-220ENST00000540805 FAM222BQ8WU58 562 aa4.33□□□□□ -1.72
PROM1-220ENST00000540805 GTSF1LQ9H1H1 148 aa4.33□□□□□ -1.72
PROM1-220ENST00000540805 AAMDCQ9H7C9 122 aa4.33□□□□□ -1.72
PROM1-220ENST00000540805 YAE1D1Q9NRH1 226 aa4.33□□□□□ -1.72
PROM1-220ENST00000540805 TRBV20OR9-2A0A075B6H5 130 aa4.33□□□□□ -1.72
PROM1-220ENST00000540805 PLAUP00749 431 aa4.33□□□□□ -1.72
PROM1-220ENST00000540805 CYC1P08574 325 aa4.33□□□□□ -1.72
PROM1-220ENST00000540805 CD40P25942 277 aa4.33□□□□□ -1.72
PROM1-220ENST00000540805 MPV17P39210 176 aa4.33□□□□□ -1.72
PROM1-220ENST00000540805 LOXL3P58215 753 aa4.33□□□□□ -1.72
PROM1-220ENST00000540805 SMAGPQ0VAQ4 97 aa4.33□□□□□ -1.72
PROM1-220ENST00000540805 COLCA1Q6ZS62 124 aa4.33□□□□□ -1.72
PROM1-220ENST00000540805 C1orf122Q6ZSJ8 110 aa4.33□□□□□ -1.72
PROM1-220ENST00000540805 TCTEX1D1Q8N7M0 179 aa4.33□□□□□ -1.72
PROM1-220ENST00000540805 OR4S2Q8NH73 311 aa4.33□□□□□ -1.72
PROM1-220ENST00000540805 OCC1Q8TAD7 63 aa4.33□□□□□ -1.72
PROM1-220ENST00000540805 SNRNP40Q96DI7 357 aaKnown RBP4.33□□□□□ -1.72
PROM1-220ENST00000540805 KCNS1Q96KK3 526 aa4.33□□□□□ -1.72
PROM1-220ENST00000540805 CLCF1Q9UBD9 225 aa4.33□□□□□ -1.72
PROM1-220ENST00000540805 S4R3C0 116 aa4.33□□□□□ -1.72
PROM1-220ENST00000540805 TMSB15BA0A087X1C1 80 aa4.33□□□□□ -1.72
PROM1-220ENST00000540805 MUC21A0A0G2JKD1 596 aa4.33□□□□□ -1.72
PROM1-220ENST00000540805 MUC21A0A140T8X8 626 aa4.33□□□□□ -1.72
PROM1-220ENST00000540805 ZNF716A6NP11 495 aa4.33□□□□□ -1.72
PROM1-220ENST00000540805 WNT9BO14905 357 aa4.33□□□□□ -1.72
PROM1-220ENST00000540805 ARL14EPLP0DKL9 152 aa4.33□□□□□ -1.72
PROM1-220ENST00000540805 SMIM17P0DL12 118 aa4.33□□□□□ -1.72
PROM1-220ENST00000540805 GCSAMLQ5JQS6 135 aa4.33□□□□□ -1.72
PROM1-220ENST00000540805 MUC21Q5SSG8 566 aa4.33□□□□□ -1.72
PROM1-220ENST00000540805 CCL19Q99731 98 aa4.33□□□□□ -1.72
PROM1-220ENST00000540805 AMMECR1Q9Y4X0 333 aaPredicted RBP4.33□□□□□ -1.72
PROM1-220ENST00000540805 TNRC6AQ8NDV7 1962 aaKnown RBP4.33□□□□□ -1.72
PROM1-220ENST00000540805 ACANP16112 2415 aa4.33□□□□□ -1.72
PROM1-220ENST00000540805 PPIAL4CA0A0B4J2A2 164 aa4.32□□□□□ -1.72
PROM1-220ENST00000540805 A0A1W2PRX2 142 aa4.32□□□□□ -1.72
PROM1-220ENST00000540805 IGKV3-20P01619 116 aa4.32□□□□□ -1.72
PROM1-220ENST00000540805 MT-ND6P03923 174 aa4.32□□□□□ -1.72
PROM1-220ENST00000540805 SLC25A5P05141 298 aaKnown RBP4.32□□□□□ -1.72
PROM1-220ENST00000540805 NBEAP1P0C6P0 100 aa4.32□□□□□ -1.72
PROM1-220ENST00000540805 ZNF883P0CG24 379 aa4.32□□□□□ -1.72
PROM1-220ENST00000540805 PPIAL4GP0DN37 164 aa4.32□□□□□ -1.72
PROM1-220ENST00000540805 CD24P25063 80 aa4.32□□□□□ -1.72
PROM1-220ENST00000540805 B3GALT5-AS1P59052 145 aa4.32□□□□□ -1.72
PROM1-220ENST00000540805 WDR73Q6P4I2 378 aa4.32□□□□□ -1.72
PROM1-220ENST00000540805 GNB1LQ9BYB4 327 aa4.32□□□□□ -1.72
PROM1-220ENST00000540805 BET1LQ9NYM9 111 aa4.32□□□□□ -1.72
PROM1-220ENST00000540805 NAT8BQ9UHF3 227 aa4.32□□□□□ -1.72
PROM1-220ENST00000540805 WDR83OSQ9Y284 106 aa4.32□□□□□ -1.72
PROM1-220ENST00000540805 SAA2-SAA4A0A096LPE2 208 aa4.32□□□□□ -1.72
PROM1-220ENST00000540805 FBLL1A6NHQ2 334 aaKnown RBP4.32□□□□□ -1.72
PROM1-220ENST00000540805 SLC25A17O43808 307 aa4.32□□□□□ -1.72
PROM1-220ENST00000540805 RAMP3O60896 148 aa4.32□□□□□ -1.72
PROM1-220ENST00000540805 S1PR2O95136 353 aa4.32□□□□□ -1.72
PROM1-220ENST00000540805 CXorf1O96002 111 aa4.32□□□□□ -1.72
PROM1-220ENST00000540805 CD1BP29016 333 aa4.32□□□□□ -1.72
PROM1-220ENST00000540805 PMCHL1Q16048 86 aa4.32□□□□□ -1.72
PROM1-220ENST00000540805 OR10J3Q5JRS4 329 aa4.32□□□□□ -1.72
PROM1-220ENST00000540805 MMD2Q8IY49 270 aa4.32□□□□□ -1.72
PROM1-220ENST00000540805 ZNF645Q8N7E2 425 aa4.32□□□□□ -1.72
PROM1-220ENST00000540805 C9orf106Q8NAJ2 232 aa4.32□□□□□ -1.72
PROM1-220ENST00000540805 ZBTB34Q8NCN2 500 aa4.32□□□□□ -1.72
PROM1-220ENST00000540805 STXBP6Q8NFX7 210 aa4.32□□□□□ -1.72
PROM1-220ENST00000540805 OR4F17Q8NGA8 305 aa4.32□□□□□ -1.72
PROM1-220ENST00000540805 OR2D3Q8NGH3 330 aa4.32□□□□□ -1.72
PROM1-220ENST00000540805 TNFRSF14Q92956 283 aa4.32□□□□□ -1.72
PROM1-220ENST00000540805 C7orf69Q9H7B7 122 aa4.32□□□□□ -1.72
PROM1-220ENST00000540805 WASHC3Q9Y3C0 194 aa4.32□□□□□ -1.72
PROM1-220ENST00000540805 TAX1BP3O14907 124 aa4.32□□□□□ -1.72
PROM1-220ENST00000540805 CECR9P0C854 216 aa4.32□□□□□ -1.72
PROM1-220ENST00000540805 P0C879 139 aa4.32□□□□□ -1.72
PROM1-220ENST00000540805 STAG3L2P0CL84 134 aa4.32□□□□□ -1.72
PROM1-220ENST00000540805 STAG3L3P0CL85 134 aa4.32□□□□□ -1.72
PROM1-220ENST00000540805 BSPH1Q075Z2 132 aa4.32□□□□□ -1.72
PROM1-220ENST00000540805 PSG7Q13046 419 aa4.32□□□□□ -1.72
PROM1-220ENST00000540805 COX19Q49B96 90 aa4.32□□□□□ -1.72
PROM1-220ENST00000540805 DGAT2L7PQ6IED9 249 aa4.32□□□□□ -1.72
PROM1-220ENST00000540805 PNKDQ8N490 385 aa4.32□□□□□ -1.72
PROM1-220ENST00000540805 ZNF714Q96N38 554 aa4.32□□□□□ -1.72
PROM1-220ENST00000540805 SFXN3Q9BWM7 321 aa4.32□□□□□ -1.72
PROM1-220ENST00000540805 FNDC4Q9H6D8 234 aaPredicted RBP4.32□□□□□ -1.72
PROM1-220ENST00000540805 VPS13CQ709C8 3753 aa4.32□□□□□ -1.72
PROM1-220ENST00000540805 IGHV1-69-2A0A0G2JMI3 117 aa4.31□□□□□ -1.72
PROM1-220ENST00000540805 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.31□□□□□ -1.72
PROM1-220ENST00000540805 OOEPA6NGQ2 149 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms