RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 OR10G4Q8NGN3 311 aa4.29□□□□□ -1.72
MRE11-209ENST00000540013 LHFPL5Q8TAF8 219 aa4.29□□□□□ -1.72
MRE11-209ENST00000540013 SCGB1C1Q8TD33 95 aa4.29□□□□□ -1.72
MRE11-209ENST00000540013 C18orf15Q96N68 181 aa4.29□□□□□ -1.72
MRE11-209ENST00000540013 PAXXQ9BUH6 204 aa4.29□□□□□ -1.72
MRE11-209ENST00000540013 OR52D1Q9H346 318 aa4.29□□□□□ -1.72
MRE11-209ENST00000540013 NOX3Q9HBY0 568 aa4.29□□□□□ -1.72
MRE11-209ENST00000540013 LYRM2Q9NU23 88 aaPredicted RBP4.29□□□□□ -1.72
MRE11-209ENST00000540013 FIS1Q9Y3D6 152 aa4.29□□□□□ -1.72
MRE11-209ENST00000540013 RFNGQ9Y644 331 aa4.29□□□□□ -1.72
MRE11-209ENST00000540013 RTTNQ86VV8 2226 aa4.29□□□□□ -1.72
MRE11-209ENST00000540013 ALPK2Q86TB3 2170 aa4.29□□□□□ -1.72
MRE11-209ENST00000540013 TRAV26-2A0A0B4J265 109 aa4.28□□□□□ -1.72
MRE11-209ENST00000540013 A0A1W2PRE2 83 aa4.28□□□□□ -1.72
MRE11-209ENST00000540013 TRAPPC13A5PLN9 417 aa4.28□□□□□ -1.72
MRE11-209ENST00000540013 SERPINE1P05121 402 aa4.28□□□□□ -1.72
MRE11-209ENST00000540013 SOD3P08294 240 aa4.28□□□□□ -1.72
MRE11-209ENST00000540013 IFI6P09912 130 aa4.28□□□□□ -1.72
MRE11-209ENST00000540013 LINC00032P0C843 101 aa4.28□□□□□ -1.72
MRE11-209ENST00000540013 CCL1P22362 96 aa4.28□□□□□ -1.72
MRE11-209ENST00000540013 OPRM1P35372 400 aa4.28□□□□□ -1.72
MRE11-209ENST00000540013 ZNF136P52737 540 aa4.28□□□□□ -1.72
MRE11-209ENST00000540013 DIO3P55073 304 aa4.28□□□□□ -1.72
MRE11-209ENST00000540013 DSCR4P56555 118 aaPredicted RBP4.28□□□□□ -1.72
MRE11-209ENST00000540013 RPL38P63173 70 aaKnown RBP4.28□□□□□ -1.72
MRE11-209ENST00000540013 IL15RAQ13261 267 aa4.28□□□□□ -1.72
MRE11-209ENST00000540013 KLHL12Q53G59 568 aa4.28□□□□□ -1.72
MRE11-209ENST00000540013 ATAD3CQ5T2N8 411 aa4.28□□□□□ -1.72
MRE11-209ENST00000540013 C5orf46Q6UWT4 87 aa4.28□□□□□ -1.72
MRE11-209ENST00000540013 CAMK2N1Q7Z7J9 78 aa4.28□□□□□ -1.72
MRE11-209ENST00000540013 OSR2Q8N2R0 312 aa4.28□□□□□ -1.72
MRE11-209ENST00000540013 OR8B12Q8NGG6 310 aa4.28□□□□□ -1.72
MRE11-209ENST00000540013 PFDN5Q99471 154 aa4.28□□□□□ -1.72
MRE11-209ENST00000540013 KRTAP4-4Q9BYR3 166 aa4.28□□□□□ -1.72
MRE11-209ENST00000540013 RASL12Q9NYN1 266 aa4.28□□□□□ -1.72
MRE11-209ENST00000540013 DNAJC15Q9Y5T4 150 aa4.28□□□□□ -1.72
MRE11-209ENST00000540013 MAP1AP78559 2803 aaPredicted RBP4.28□□□□□ -1.72
MRE11-209ENST00000540013 CSPG4Q6UVK1 2322 aa4.28□□□□□ -1.72
MRE11-209ENST00000540013 TLN2Q9Y4G6 2542 aa4.27□□□□□ -1.73
MRE11-209ENST00000540013 HRNRQ86YZ3 2850 aaPredicted RBP4.27□□□□□ -1.73
MRE11-209ENST00000540013 IGKV3D-15A0A087WSY6 115 aa4.27□□□□□ -1.73
MRE11-209ENST00000540013 RFPL4AA6NLU0 287 aa4.27□□□□□ -1.73
MRE11-209ENST00000540013 RFPL4AL1F8VTS6 287 aa4.27□□□□□ -1.73
MRE11-209ENST00000540013 G3V2T6 193 aa4.27□□□□□ -1.73
MRE11-209ENST00000540013 IGLV2-23P01705 113 aa4.27□□□□□ -1.73
MRE11-209ENST00000540013 CRISP2P16562 243 aa4.27□□□□□ -1.73
MRE11-209ENST00000540013 SPI1P17947 270 aa4.27□□□□□ -1.73
MRE11-209ENST00000540013 GABRA3P34903 492 aa4.27□□□□□ -1.73
MRE11-209ENST00000540013 PSMB3P49720 205 aa4.27□□□□□ -1.73
MRE11-209ENST00000540013 LHX2P50458 406 aa4.27□□□□□ -1.73
MRE11-209ENST00000540013 SNRPD2P62316 118 aaKnown RBP4.27□□□□□ -1.73
MRE11-209ENST00000540013 GNG5P63218 68 aa4.27□□□□□ -1.73
MRE11-209ENST00000540013 CDK5Q00535 292 aa4.27□□□□□ -1.73
MRE11-209ENST00000540013 ACP7Q6ZNF0 438 aa4.27□□□□□ -1.73
MRE11-209ENST00000540013 ZCCHC23Q6ZST2 131 aa4.27□□□□□ -1.73
MRE11-209ENST00000540013 SLC25A42Q86VD7 318 aa4.27□□□□□ -1.73
MRE11-209ENST00000540013 ZNF584Q8IVC4 421 aa4.27□□□□□ -1.73
MRE11-209ENST00000540013 TMEM75Q8N9X5 138 aa4.27□□□□□ -1.73
MRE11-209ENST00000540013 OR2M3Q8NG83 312 aa4.27□□□□□ -1.73
MRE11-209ENST00000540013 OR1L1Q8NH94 360 aa4.27□□□□□ -1.73
MRE11-209ENST00000540013 RNASE6Q93091 150 aaKnown RBP4.27□□□□□ -1.73
MRE11-209ENST00000540013 PPP3R2Q96LZ3 170 aa4.27□□□□□ -1.73
MRE11-209ENST00000540013 LINC00479Q96M42 142 aa4.27□□□□□ -1.73
MRE11-209ENST00000540013 RSPO3Q9BXY4 272 aaPredicted RBP4.27□□□□□ -1.73
MRE11-209ENST00000540013 TBL1XR1Q9BZK7 514 aa4.27□□□□□ -1.73
MRE11-209ENST00000540013 ZNF436Q9C0F3 470 aaPredicted RBP4.27□□□□□ -1.73
MRE11-209ENST00000540013 ACER3Q9NUN7 267 aa4.27□□□□□ -1.73
MRE11-209ENST00000540013 JPT1Q9UK76 154 aa4.27□□□□□ -1.73
MRE11-209ENST00000540013 PXMP4Q9Y6I8 212 aa4.27□□□□□ -1.73
MRE11-209ENST00000540013 IGLV3-32A0A0A0MS00 114 aa4.26□□□□□ -1.73
MRE11-209ENST00000540013 TMEM72A0PK05 275 aa4.26□□□□□ -1.73
MRE11-209ENST00000540013 KNCNA6PVL3 124 aa4.26□□□□□ -1.73
MRE11-209ENST00000540013 C17orf51A8MQB3 221 aa4.26□□□□□ -1.73
MRE11-209ENST00000540013 CDRT1O95170 752 aa4.26□□□□□ -1.73
MRE11-209ENST00000540013 BPGMP07738 259 aa4.26□□□□□ -1.73
MRE11-209ENST00000540013 TFPTP0C1Z6 253 aa4.26□□□□□ -1.73
MRE11-209ENST00000540013 CDK2P24941 298 aa4.26□□□□□ -1.73
MRE11-209ENST00000540013 AKR1C3P42330 323 aa4.26□□□□□ -1.73
MRE11-209ENST00000540013 INPP1P49441 399 aa4.26□□□□□ -1.73
MRE11-209ENST00000540013 RAP1AP62834 184 aa4.26□□□□□ -1.73
MRE11-209ENST00000540013 DAZ2Q13117 558 aaKnown RBP4.26□□□□□ -1.73
MRE11-209ENST00000540013 RNF212Q495C1 297 aa4.26□□□□□ -1.73
MRE11-209ENST00000540013 ZNF613Q6PF04 617 aa4.26□□□□□ -1.73
MRE11-209ENST00000540013 DAZ4Q86SG3 579 aaKnown RBP4.26□□□□□ -1.73
MRE11-209ENST00000540013 MARCH3Q86UD3 253 aa4.26□□□□□ -1.73
MRE11-209ENST00000540013 ZNF429Q86V71 674 aa4.26□□□□□ -1.73
MRE11-209ENST00000540013 FAM24BQ8N5W8 94 aa4.26□□□□□ -1.73
MRE11-209ENST00000540013 GDPD1Q8N9F7 314 aa4.26□□□□□ -1.73
MRE11-209ENST00000540013 OR8J3Q8NGG0 315 aa4.26□□□□□ -1.73
MRE11-209ENST00000540013 OR5J2Q8NH18 312 aa4.26□□□□□ -1.73
MRE11-209ENST00000540013 APOBEC3DQ96AK3 386 aaPredicted RBP4.26□□□□□ -1.73
MRE11-209ENST00000540013 C1orf50Q9BV19 199 aa4.26□□□□□ -1.73
MRE11-209ENST00000540013 DAZ1Q9NQZ3 744 aaKnown RBP4.26□□□□□ -1.73
MRE11-209ENST00000540013 DAZ3Q9NR90 486 aaKnown RBP4.26□□□□□ -1.73
MRE11-209ENST00000540013 MED11Q9P086 117 aa4.26□□□□□ -1.73
MRE11-209ENST00000540013 FLNAP21333 2647 aaKnown RBP4.26□□□□□ -1.73
MRE11-209ENST00000540013 DYSFO75923 2080 aa4.26□□□□□ -1.73
MRE11-209ENST00000540013 ABCA1O95477 2261 aa4.25□□□□□ -1.73
MRE11-209ENST00000540013 SETD2Q9BYW2 2564 aaPredicted RBP4.25□□□□□ -1.73
MRE11-209ENST00000540013 A0A1W2PQD3 144 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 163 ms