RNA–Protein interactions for RNA: ENST00000537965.5

SNHG1-207, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-207ENST00000537965 LPCAT3Q6P1A2 487 aa3.84□□□□□ -1.79
SNHG1-207ENST00000537965 CFAP161Q6P656 301 aa3.84□□□□□ -1.79
SNHG1-207ENST00000537965 DHRS11Q6UWP2 260 aa3.84□□□□□ -1.79
SNHG1-207ENST00000537965 ZNF600Q6ZNG1 722 aa3.84□□□□□ -1.79
SNHG1-207ENST00000537965 ZNF818PQ6ZRF7 136 aa3.84□□□□□ -1.79
SNHG1-207ENST00000537965 Q6ZTC4 211 aa3.84□□□□□ -1.79
SNHG1-207ENST00000537965 HOGA1Q86XE5 327 aa3.84□□□□□ -1.79
SNHG1-207ENST00000537965 UBE2DNLQ8IWF7 75 aa3.84□□□□□ -1.79
SNHG1-207ENST00000537965 OR4A16Q8NH70 328 aa3.84□□□□□ -1.79
SNHG1-207ENST00000537965 GLMPQ8WWB7 406 aa3.84□□□□□ -1.79
SNHG1-207ENST00000537965 NPIPB3Q92617 1050 aa3.84□□□□□ -1.79
SNHG1-207ENST00000537965 SLC25A46Q96AG3 418 aa3.84□□□□□ -1.79
SNHG1-207ENST00000537965 MOB3AQ96BX8 217 aa3.84□□□□□ -1.79
SNHG1-207ENST00000537965 ZNF414Q96IQ9 312 aa3.84□□□□□ -1.79
SNHG1-207ENST00000537965 MS4A6AQ9H2W1 248 aa3.84□□□□□ -1.79
SNHG1-207ENST00000537965 NDUFB11Q9NX14 153 aa3.84□□□□□ -1.79
SNHG1-207ENST00000537965 RABAC1Q9UI14 185 aa3.84□□□□□ -1.79
SNHG1-207ENST00000537965 TBC1D24Q9ULP9 559 aa3.84□□□□□ -1.79
SNHG1-207ENST00000537965 HECTD4Q9Y4D8 3996 aa3.84□□□□□ -1.79
SNHG1-207ENST00000537965 DNAH6Q9C0G6 4158 aa3.84□□□□□ -1.8
SNHG1-207ENST00000537965 PCLOQ9Y6V0 5065 aa3.83□□□□□ -1.8
SNHG1-207ENST00000537965 TRAV18A0A075B6X5 111 aa3.83□□□□□ -1.8
SNHG1-207ENST00000537965 IGHV3-49A0A0A0MS15 119 aa3.83□□□□□ -1.8
SNHG1-207ENST00000537965 SMIM9A6NGZ8 99 aa3.83□□□□□ -1.8
SNHG1-207ENST00000537965 I3L2K1 104 aa3.83□□□□□ -1.8
SNHG1-207ENST00000537965 M0R2N4 97 aa3.83□□□□□ -1.8
SNHG1-207ENST00000537965 SSX5O60225 188 aa3.83□□□□□ -1.8
SNHG1-207ENST00000537965 PGLYRP1O75594 196 aaPredicted RBP3.83□□□□□ -1.8
SNHG1-207ENST00000537965 TOMM40O96008 361 aa3.83□□□□□ -1.8
SNHG1-207ENST00000537965 GNRHRP30968 328 aa3.83□□□□□ -1.8
SNHG1-207ENST00000537965 G6PCP35575 357 aa3.83□□□□□ -1.8
SNHG1-207ENST00000537965 SNCAP37840 140 aa3.83□□□□□ -1.8
SNHG1-207ENST00000537965 HOXA1P49639 335 aaPredicted RBP3.83□□□□□ -1.8
SNHG1-207ENST00000537965 FAM3BP58499 235 aaPredicted RBP3.83□□□□□ -1.8
SNHG1-207ENST00000537965 TAS2R46P59540 309 aa3.83□□□□□ -1.8
SNHG1-207ENST00000537965 BAK1Q16611 211 aa3.83□□□□□ -1.8
SNHG1-207ENST00000537965 RNF212Q495C1 297 aa3.83□□□□□ -1.8
SNHG1-207ENST00000537965 UBE2UQ5VVX9 321 aa3.83□□□□□ -1.8
SNHG1-207ENST00000537965 LEMD1Q68G75 181 aa3.83□□□□□ -1.8
SNHG1-207ENST00000537965 C22orf42Q6IC83 251 aa3.83□□□□□ -1.8
SNHG1-207ENST00000537965 TOMM20LQ6UXN7 152 aa3.83□□□□□ -1.8
SNHG1-207ENST00000537965 H2BFWTQ7Z2G1 175 aa3.83□□□□□ -1.8
SNHG1-207ENST00000537965 TRPT1Q86TN4 253 aaKnown RBP3.83□□□□□ -1.8
SNHG1-207ENST00000537965 TMEM17Q86X19 198 aa3.83□□□□□ -1.8
SNHG1-207ENST00000537965 ZNF114Q8NC26 417 aa3.83□□□□□ -1.8
SNHG1-207ENST00000537965 STXBP6Q8NFX7 210 aa3.83□□□□□ -1.8
SNHG1-207ENST00000537965 PINX1Q96BK5 328 aaKnown RBP3.83□□□□□ -1.8
SNHG1-207ENST00000537965 RNF125Q96EQ8 232 aa3.83□□□□□ -1.8
SNHG1-207ENST00000537965 METTL26Q96S19 204 aa3.83□□□□□ -1.8
SNHG1-207ENST00000537965 KRTAP1-5Q9BYS1 174 aa3.83□□□□□ -1.8
SNHG1-207ENST00000537965 VCX3BQ9H321 246 aa3.83□□□□□ -1.8
SNHG1-207ENST00000537965 RNF167Q9H6Y7 350 aa3.83□□□□□ -1.8
SNHG1-207ENST00000537965 IFT46Q9NQC8 304 aa3.83□□□□□ -1.8
SNHG1-207ENST00000537965 RHBDL2Q9NX52 303 aa3.83□□□□□ -1.8
SNHG1-207ENST00000537965 SSR3Q9UNL2 185 aa3.83□□□□□ -1.8
SNHG1-207ENST00000537965 RRP15Q9Y3B9 282 aaKnown RBP3.83□□□□□ -1.8
SNHG1-207ENST00000537965 HERC2O95714 4834 aa3.82□□□□□ -1.8
SNHG1-207ENST00000537965 PKHD1P08F94 4074 aa3.82□□□□□ -1.8
SNHG1-207ENST00000537965 IGHV3OR16-13A0A075B7E8 117 aa3.82□□□□□ -1.8
SNHG1-207ENST00000537965 TRAV30A0A087WSZ9 112 aa3.82□□□□□ -1.8
SNHG1-207ENST00000537965 IGHV3-74A0A0B4J1X5 117 aa3.82□□□□□ -1.8
SNHG1-207ENST00000537965 HELTA6NFD8 242 aa3.82□□□□□ -1.8
SNHG1-207ENST00000537965 K7EQG2 157 aa3.82□□□□□ -1.8
SNHG1-207ENST00000537965 GPR31O00270 319 aa3.82□□□□□ -1.8
SNHG1-207ENST00000537965 RTL8CO15255 209 aa3.82□□□□□ -1.8
SNHG1-207ENST00000537965 ATG12O94817 140 aa3.82□□□□□ -1.8
SNHG1-207ENST00000537965 TMEM50AO95807 157 aa3.82□□□□□ -1.8
SNHG1-207ENST00000537965 MT-CO2P00403 227 aa3.82□□□□□ -1.8
SNHG1-207ENST00000537965 RLN1P04808 185 aa3.82□□□□□ -1.8
SNHG1-207ENST00000537965 SPART-AS1P0CW21 52 aa3.82□□□□□ -1.8
SNHG1-207ENST00000537965 PCP4P48539 62 aa3.82□□□□□ -1.8
SNHG1-207ENST00000537965 HSPA13P48723 471 aa3.82□□□□□ -1.8
SNHG1-207ENST00000537965 HSPE1P61604 102 aaKnown RBP3.82□□□□□ -1.8
SNHG1-207ENST00000537965 SNRPD3P62318 126 aaKnown RBP3.82□□□□□ -1.8
SNHG1-207ENST00000537965 PRCDQ00LT1 54 aa3.82□□□□□ -1.8
SNHG1-207ENST00000537965 ACTL10Q5JWF8 245 aa3.82□□□□□ -1.8
SNHG1-207ENST00000537965 C1orf134Q5TEV5 83 aa3.82□□□□□ -1.8
SNHG1-207ENST00000537965 SFXN4Q6P4A7 337 aa3.82□□□□□ -1.8
SNHG1-207ENST00000537965 OR6F1Q8NGZ6 308 aa3.82□□□□□ -1.8
SNHG1-207ENST00000537965 FCAMRQ8WWV6 532 aa3.82□□□□□ -1.8
SNHG1-207ENST00000537965 FCGR1BQ92637 280 aa3.82□□□□□ -1.8
SNHG1-207ENST00000537965 TMEM230Q96A57 120 aa3.82□□□□□ -1.8
SNHG1-207ENST00000537965 PDCD10Q9BUL8 212 aa3.82□□□□□ -1.8
SNHG1-207ENST00000537965 TXNL4BQ9NX01 149 aaKnown RBP3.82□□□□□ -1.8
SNHG1-207ENST00000537965 EHFQ9NZC4 300 aa3.82□□□□□ -1.8
SNHG1-207ENST00000537965 NSG2Q9Y328 171 aa3.82□□□□□ -1.8
SNHG1-207ENST00000537965 PUS1Q9Y606 427 aaKnown RBP eCLIP3.82□□□□□ -1.8
SNHG1-207ENST00000537965 RYR1P21817 5038 aa3.82□□□□□ -1.8
SNHG1-207ENST00000537965 IGLV5-39A0A0G2JS06 123 aa3.81□□□□□ -1.8
SNHG1-207ENST00000537965 PGPEP1LA6NFU8 196 aa3.81□□□□□ -1.8
SNHG1-207ENST00000537965 CDK2AP2O75956 126 aa3.81□□□□□ -1.8
SNHG1-207ENST00000537965 CD74P04233 296 aa3.81□□□□□ -1.8
SNHG1-207ENST00000537965 GIG44P09565 113 aaPredicted RBP3.81□□□□□ -1.8
SNHG1-207ENST00000537965 ZNF688P0C7X2 276 aa3.81□□□□□ -1.8
SNHG1-207ENST00000537965 CRYBB3P26998 211 aa3.81□□□□□ -1.8
SNHG1-207ENST00000537965 P2RY1P47900 373 aa3.81□□□□□ -1.8
SNHG1-207ENST00000537965 DHRS2Q13268 280 aa3.81□□□□□ -1.8
SNHG1-207ENST00000537965 C12orf74Q32Q52 190 aa3.81□□□□□ -1.8
SNHG1-207ENST00000537965 C9orf47Q6ZRZ4 202 aa3.81□□□□□ -1.8
SNHG1-207ENST00000537965 CROCCP3Q8IVE0 287 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms