RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 RNASE8Q8TDE3 154 aaKnown RBP6.75□□□□□ -1.33
ABCA4-207ENST00000536513 GATAD1Q8WUU5 269 aa6.75□□□□□ -1.33
ABCA4-207ENST00000536513 GAFA1Q96PS6 74 aa6.75□□□□□ -1.33
ABCA4-207ENST00000536513 BPESC1Q9GZL8 116 aa6.75□□□□□ -1.33
ABCA4-207ENST00000536513 TRAV3A0A0B4J244 114 aa6.75□□□□□ -1.33
ABCA4-207ENST00000536513 CTXND1A0A1B0GTU2 59 aa6.75□□□□□ -1.33
ABCA4-207ENST00000536513 SH2D7A6NKC9 451 aaPredicted RBP6.75□□□□□ -1.33
ABCA4-207ENST00000536513 FOXI3A8MTJ6 420 aaPredicted RBP6.75□□□□□ -1.33
ABCA4-207ENST00000536513 OR7C2O60412 319 aa6.75□□□□□ -1.33
ABCA4-207ENST00000536513 FBLN7Q53RD9 439 aa6.75□□□□□ -1.33
ABCA4-207ENST00000536513 ACSM6Q6P461 480 aa6.75□□□□□ -1.33
ABCA4-207ENST00000536513 OR8B3Q8NGG8 313 aa6.75□□□□□ -1.33
ABCA4-207ENST00000536513 OR2D3Q8NGH3 330 aa6.75□□□□□ -1.33
ABCA4-207ENST00000536513 ITLN2Q8WWU7 325 aaPredicted RBP6.75□□□□□ -1.33
ABCA4-207ENST00000536513 RPEQ96AT9 228 aa6.75□□□□□ -1.33
ABCA4-207ENST00000536513 OR8B2Q96RD0 313 aa6.75□□□□□ -1.33
ABCA4-207ENST00000536513 CTSZQ9UBR2 303 aa6.75□□□□□ -1.33
ABCA4-207ENST00000536513 TEX15Q9BXT5 2789 aa6.75□□□□□ -1.33
ABCA4-207ENST00000536513 IGLV3-9A0A075B6K5 115 aa6.75□□□□□ -1.33
ABCA4-207ENST00000536513 SAA2-SAA4A0A096LPE2 208 aa6.75□□□□□ -1.33
ABCA4-207ENST00000536513 IGHV3-35A0A0C4DH35 117 aa6.75□□□□□ -1.33
ABCA4-207ENST00000536513 M0QZ24 198 aa6.75□□□□□ -1.33
ABCA4-207ENST00000536513 BMPR1BO00238 502 aa6.75□□□□□ -1.33
ABCA4-207ENST00000536513 SAA2P0DJI9 122 aaPredicted RBP6.75□□□□□ -1.33
ABCA4-207ENST00000536513 SRP14P37108 136 aaKnown RBP6.75□□□□□ -1.33
ABCA4-207ENST00000536513 TMEM177Q53S58 311 aa6.75□□□□□ -1.33
ABCA4-207ENST00000536513 C10orf55Q5SWW7 151 aa6.75□□□□□ -1.33
ABCA4-207ENST00000536513 TMEM200BQ69YZ2 307 aa6.75□□□□□ -1.33
ABCA4-207ENST00000536513 LHFPL4Q7Z7J7 247 aa6.75□□□□□ -1.33
ABCA4-207ENST00000536513 DUX5Q96PT3 197 aa6.75□□□□□ -1.33
ABCA4-207ENST00000536513 P2RX4Q99571 388 aa6.75□□□□□ -1.33
ABCA4-207ENST00000536513 TBL2Q9Y4P3 447 aaKnown RBP6.75□□□□□ -1.33
ABCA4-207ENST00000536513 SERF2P84101 59 aa6.74□□□□□ -1.33
ABCA4-207ENST00000536513 MORN2Q502X0 79 aa6.74□□□□□ -1.33
ABCA4-207ENST00000536513 SLC35E4Q6ICL7 350 aa6.74□□□□□ -1.33
ABCA4-207ENST00000536513 HCP5Q6MZN7 132 aa6.74□□□□□ -1.33
ABCA4-207ENST00000536513 MOB1BQ7L9L4 216 aa6.74□□□□□ -1.33
ABCA4-207ENST00000536513 HARBI1Q96MB7 349 aa6.74□□□□□ -1.33
ABCA4-207ENST00000536513 IGKV1-16P04430 117 aa6.74□□□□□ -1.33
ABCA4-207ENST00000536513 LYL1P12980 280 aa6.74□□□□□ -1.33
ABCA4-207ENST00000536513 CT45A1Q5HYN5 189 aa6.74□□□□□ -1.33
ABCA4-207ENST00000536513 FAM90A2PQ658T7 463 aa6.74□□□□□ -1.33
ABCA4-207ENST00000536513 CT45A3Q8NHU0 189 aa6.74□□□□□ -1.33
ABCA4-207ENST00000536513 SSMEM1Q8WWF3 244 aa6.74□□□□□ -1.33
ABCA4-207ENST00000536513 TAF15Q92804 592 aaKnown RBP eCLIP6.74□□□□□ -1.33
ABCA4-207ENST00000536513 RNF2Q99496 336 aa6.74□□□□□ -1.33
ABCA4-207ENST00000536513 CCL19Q99731 98 aa6.74□□□□□ -1.33
ABCA4-207ENST00000536513 KBTBD11-OT1A0A1B0GTJ5 212 aa6.74□□□□□ -1.33
ABCA4-207ENST00000536513 ITGB1BP1O14713 200 aa6.74□□□□□ -1.33
ABCA4-207ENST00000536513 ADMP35318 185 aa6.74□□□□□ -1.33
ABCA4-207ENST00000536513 TDRG1Q3Y452 100 aa6.74□□□□□ -1.33
ABCA4-207ENST00000536513 DNLZQ5SXM8 178 aa6.74□□□□□ -1.33
ABCA4-207ENST00000536513 INSIG2Q9Y5U4 225 aa6.74□□□□□ -1.33
ABCA4-207ENST00000536513 IGHV3OR16-8A0A075B7F1 116 aa6.73□□□□□ -1.33
ABCA4-207ENST00000536513 FAM90A10PA6NDY2 464 aa6.73□□□□□ -1.33
ABCA4-207ENST00000536513 FAM90A18PA6NE21 464 aa6.73□□□□□ -1.33
ABCA4-207ENST00000536513 FAM90A16PA6NEW6 464 aa6.73□□□□□ -1.33
ABCA4-207ENST00000536513 GAGE10A6NGK3 116 aa6.73□□□□□ -1.33
ABCA4-207ENST00000536513 FAM90A20PA6NIJ5 464 aa6.73□□□□□ -1.33
ABCA4-207ENST00000536513 FAM90A8PA6NJQ4 464 aa6.73□□□□□ -1.33
ABCA4-207ENST00000536513 FAM90A7PA6NKC0 464 aa6.73□□□□□ -1.33
ABCA4-207ENST00000536513 FAM90A22PA8MWA6 464 aa6.73□□□□□ -1.33
ABCA4-207ENST00000536513 FAM90A12PA8MX19 464 aa6.73□□□□□ -1.33
ABCA4-207ENST00000536513 FAM90A5PA8MXJ8 464 aa6.73□□□□□ -1.33
ABCA4-207ENST00000536513 FAM90A23PA8MXZ1 464 aa6.73□□□□□ -1.33
ABCA4-207ENST00000536513 K7EQM0 130 aa6.73□□□□□ -1.33
ABCA4-207ENST00000536513 SNAI2O43623 268 aa6.73□□□□□ -1.33
ABCA4-207ENST00000536513 NUDT3O95989 172 aa6.73□□□□□ -1.33
ABCA4-207ENST00000536513 FAM90A15PP0C7V4 464 aa6.73□□□□□ -1.33
ABCA4-207ENST00000536513 FAM90A13PP0C7W8 464 aa6.73□□□□□ -1.33
ABCA4-207ENST00000536513 FAM90A14PP0C7W9 464 aa6.73□□□□□ -1.33
ABCA4-207ENST00000536513 FAM90A24PP0C7X0 464 aa6.73□□□□□ -1.33
ABCA4-207ENST00000536513 SRIP30626 198 aa6.73□□□□□ -1.33
ABCA4-207ENST00000536513 PRSS8Q16651 343 aa6.73□□□□□ -1.33
ABCA4-207ENST00000536513 RPEL1Q2QD12 228 aa6.73□□□□□ -1.33
ABCA4-207ENST00000536513 BRD3OSQ6XYD6 125 aa6.73□□□□□ -1.33
ABCA4-207ENST00000536513 MSI2Q96DH6 328 aaKnown RBP6.73□□□□□ -1.33
ABCA4-207ENST00000536513 MRPL20Q9BYC9 149 aaKnown RBP6.73□□□□□ -1.33
ABCA4-207ENST00000536513 LINC00527Q9UJ94 153 aa6.73□□□□□ -1.33
ABCA4-207ENST00000536513 CSN3P07498 182 aa6.73□□□□□ -1.33
ABCA4-207ENST00000536513 COX6B1P14854 86 aa6.73□□□□□ -1.33
ABCA4-207ENST00000536513 FXYD3Q14802 87 aa6.73□□□□□ -1.33
ABCA4-207ENST00000536513 KIR3DL3Q8N743 410 aa6.73□□□□□ -1.33
ABCA4-207ENST00000536513 ZNF645Q8N7E2 425 aa6.73□□□□□ -1.33
ABCA4-207ENST00000536513 HCFC1P51610 2035 aa6.73□□□□□ -1.33
ABCA4-207ENST00000536513 GNG4P50150 75 aa6.73□□□□□ -1.33
ABCA4-207ENST00000536513 LY6EQ16553 131 aa6.73□□□□□ -1.33
ABCA4-207ENST00000536513 LINC00596Q86U02 117 aa6.73□□□□□ -1.33
ABCA4-207ENST00000536513 NIT1Q86X76 327 aa6.73□□□□□ -1.33
ABCA4-207ENST00000536513 TMEM147Q9BVK8 224 aa6.73□□□□□ -1.33
ABCA4-207ENST00000536513 QTRT1Q9BXR0 403 aaKnown RBP6.73□□□□□ -1.33
ABCA4-207ENST00000536513 COMMD5Q9GZQ3 224 aa6.73□□□□□ -1.33
ABCA4-207ENST00000536513 IDI2-AS1Q9NZ38 188 aa6.73□□□□□ -1.33
ABCA4-207ENST00000536513 CFPP27918 469 aa6.72□□□□□ -1.33
ABCA4-207ENST00000536513 RELBQ01201 579 aa6.72□□□□□ -1.33
ABCA4-207ENST00000536513 LCN12Q6JVE5 192 aa6.72□□□□□ -1.33
ABCA4-207ENST00000536513 ZNF788Q6ZQV5 615 aa6.72□□□□□ -1.33
ABCA4-207ENST00000536513 NUP37Q8NFH4 326 aa6.72□□□□□ -1.33
ABCA4-207ENST00000536513 RNASEH2CQ8TDP1 164 aaKnown RBP6.72□□□□□ -1.33
ABCA4-207ENST00000536513 NRN1Q9NPD7 142 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms