RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 OR2J3O76001 311 aa15.93■□□□□ 0.14
TNFRSF1A-205ENST00000534885 MBP02144 154 aa15.93■□□□□ 0.14
TNFRSF1A-205ENST00000534885 C19orf54Q5BKX5 351 aa15.93■□□□□ 0.14
TNFRSF1A-205ENST00000534885 SPSB3Q6PJ21 355 aa15.93■□□□□ 0.14
TNFRSF1A-205ENST00000534885 NARS2Q96I59 477 aaKnown RBP15.93■□□□□ 0.14
TNFRSF1A-205ENST00000534885 SLC25A22Q9H936 323 aa15.93■□□□□ 0.14
TNFRSF1A-205ENST00000534885 KCNIP2Q9NS61 270 aa15.93■□□□□ 0.14
TNFRSF1A-205ENST00000534885 TRAV41A0A0B4J266 112 aa15.93■□□□□ 0.14
TNFRSF1A-205ENST00000534885 CRIP2P52943 208 aaPredicted RBP15.93■□□□□ 0.14
TNFRSF1A-205ENST00000534885 ACOT6Q3I5F7 207 aaPredicted RBP15.93■□□□□ 0.14
TNFRSF1A-205ENST00000534885 CYP2G1PQ6ZSU1 146 aa15.93■□□□□ 0.14
TNFRSF1A-205ENST00000534885 TMEM68Q96MH6 324 aa15.93■□□□□ 0.14
TNFRSF1A-205ENST00000534885 NOL4LQ96MY1 436 aaPredicted RBP15.93■□□□□ 0.14
TNFRSF1A-205ENST00000534885 NDUFB8O95169 186 aa15.92■□□□□ 0.14
TNFRSF1A-205ENST00000534885 IGF1P05019 195 aa15.92■□□□□ 0.14
TNFRSF1A-205ENST00000534885 CCL20P78556 96 aa15.92■□□□□ 0.14
TNFRSF1A-205ENST00000534885 LCN15Q6UWW0 184 aa15.92■□□□□ 0.14
TNFRSF1A-205ENST00000534885 DUX5Q96PT3 197 aa15.92■□□□□ 0.14
TNFRSF1A-205ENST00000534885 NKX6-2Q9C056 277 aaPredicted RBP15.92■□□□□ 0.14
TNFRSF1A-205ENST00000534885 TCRBV4S1A1TA0A5B7 111 aa15.91■□□□□ 0.14
TNFRSF1A-205ENST00000534885 HMGB3O15347 200 aaKnown RBP15.91■□□□□ 0.14
TNFRSF1A-205ENST00000534885 OR4X1Q8NH49 305 aa15.91■□□□□ 0.14
TNFRSF1A-205ENST00000534885 TMEM218A2RU14 115 aa15.91■□□□□ 0.14
TNFRSF1A-205ENST00000534885 CYB5BO43169 146 aa15.91■□□□□ 0.14
TNFRSF1A-205ENST00000534885 IL34Q6ZMJ4 242 aa15.91■□□□□ 0.14
TNFRSF1A-205ENST00000534885 ZNF355PQ9NSJ1 428 aa15.91■□□□□ 0.14
TNFRSF1A-205ENST00000534885 NUDT19A8MXV4 375 aa15.9■□□□□ 0.14
TNFRSF1A-205ENST00000534885 FGF8P55075 233 aaPredicted RBP15.9■□□□□ 0.14
TNFRSF1A-205ENST00000534885 LINC00469Q8N7U9 141 aa15.9■□□□□ 0.14
TNFRSF1A-205ENST00000534885 THYN1Q9P016 225 aa15.9■□□□□ 0.14
TNFRSF1A-205ENST00000534885 FBXL7Q9UJT9 491 aa15.9■□□□□ 0.14
TNFRSF1A-205ENST00000534885 MTORP42345 2549 aa15.9■□□□□ 0.14
TNFRSF1A-205ENST00000534885 FAM74A7A6NL05 159 aa15.9■□□□□ 0.14
TNFRSF1A-205ENST00000534885 IGLC1P0CG04 106 aa15.9■□□□□ 0.14
TNFRSF1A-205ENST00000534885 SRSF3P84103 164 aaKnown RBP15.9■□□□□ 0.14
TNFRSF1A-205ENST00000534885 TMEM95Q3KNT9 176 aa15.9■□□□□ 0.14
TNFRSF1A-205ENST00000534885 FAM74A3Q4VXF1 159 aa15.9■□□□□ 0.14
TNFRSF1A-205ENST00000534885 MBD3L1Q8WWY6 194 aa15.9■□□□□ 0.14
TNFRSF1A-205ENST00000534885 RAB24Q969Q5 203 aa15.9■□□□□ 0.14
TNFRSF1A-205ENST00000534885 CUBNO60494 3623 aa15.9■□□□□ 0.14
TNFRSF1A-205ENST00000534885 MAP1LC3B2A6NCE7 125 aa15.89■□□□□ 0.13
TNFRSF1A-205ENST00000534885 MS4A10Q96PG2 267 aa15.89■□□□□ 0.13
TNFRSF1A-205ENST00000534885 TRGV9Q99603 122 aa15.89■□□□□ 0.13
TNFRSF1A-205ENST00000534885 ACTR3CQ9C0K3 210 aaPredicted RBP15.89■□□□□ 0.13
TNFRSF1A-205ENST00000534885 MAP1LC3BQ9GZQ8 125 aa15.89■□□□□ 0.13
TNFRSF1A-205ENST00000534885 TRBV9A0A0B4J1U6 114 aa15.88■□□□□ 0.13
TNFRSF1A-205ENST00000534885 CTXND1A0A1B0GTU2 59 aa15.88■□□□□ 0.13
TNFRSF1A-205ENST00000534885 SEC14L6B5MCN3 397 aa15.88■□□□□ 0.13
TNFRSF1A-205ENST00000534885 CLN5O75503 358 aa15.88■□□□□ 0.13
TNFRSF1A-205ENST00000534885 IGHV3-23P01764 117 aa15.88■□□□□ 0.13
TNFRSF1A-205ENST00000534885 CDC34P49427 236 aaPredicted RBP15.88■□□□□ 0.13
TNFRSF1A-205ENST00000534885 RHOGP84095 191 aa15.88■□□□□ 0.13
TNFRSF1A-205ENST00000534885 KLK9Q2XQG4 91 aa15.88■□□□□ 0.13
TNFRSF1A-205ENST00000534885 CLRN3Q8NCR9 226 aa15.88■□□□□ 0.13
TNFRSF1A-205ENST00000534885 SEPSECSQ9HD40 501 aaKnown RBP15.88■□□□□ 0.13
TNFRSF1A-205ENST00000534885 KLK9Q9UKQ9 250 aa15.88■□□□□ 0.13
TNFRSF1A-205ENST00000534885 TRAV1-1A0A0B4J248 108 aa15.88■□□□□ 0.13
TNFRSF1A-205ENST00000534885 F8W735 103 aaPredicted RBP15.88■□□□□ 0.13
TNFRSF1A-205ENST00000534885 AP4M1O00189 453 aa15.88■□□□□ 0.13
TNFRSF1A-205ENST00000534885 HIST1H1BP16401 226 aaKnown RBP15.88■□□□□ 0.13
TNFRSF1A-205ENST00000534885 HNF1AP20823 631 aa15.88■□□□□ 0.13
TNFRSF1A-205ENST00000534885 TMEM231Q9H6L2 316 aa15.88■□□□□ 0.13
TNFRSF1A-205ENST00000534885 IGKV1-17P01599 117 aa15.87■□□□□ 0.13
TNFRSF1A-205ENST00000534885 PPIFP30405 207 aaKnown RBP15.87■□□□□ 0.13
TNFRSF1A-205ENST00000534885 C15orf32Q32M92 178 aa15.87■□□□□ 0.13
TNFRSF1A-205ENST00000534885 C21orf62Q9NYP8 219 aa15.87■□□□□ 0.13
TNFRSF1A-205ENST00000534885 LY6G6DO95868 133 aa15.87■□□□□ 0.13
TNFRSF1A-205ENST00000534885 HBE1P02100 147 aa15.87■□□□□ 0.13
TNFRSF1A-205ENST00000534885 SELENOTP62341 195 aa15.87■□□□□ 0.13
TNFRSF1A-205ENST00000534885 TIGITQ495A1 244 aa15.87■□□□□ 0.13
TNFRSF1A-205ENST00000534885 SPATA31B1PQ5VZV4 182 aa15.87■□□□□ 0.13
TNFRSF1A-205ENST00000534885 SVBPQ8N300 66 aa15.87■□□□□ 0.13
TNFRSF1A-205ENST00000534885 HIVEP2P31629 2446 aa15.86■□□□□ 0.13
TNFRSF1A-205ENST00000534885 A0A1W2PPV4 95 aa15.86■□□□□ 0.13
TNFRSF1A-205ENST00000534885 PSMB11A5LHX3 300 aa15.86■□□□□ 0.13
TNFRSF1A-205ENST00000534885 MFAP4P55083 255 aa15.86■□□□□ 0.13
TNFRSF1A-205ENST00000534885 TMEM37Q8WXS4 190 aa15.86■□□□□ 0.13
TNFRSF1A-205ENST00000534885 SCRT1Q9BWW7 348 aa15.86■□□□□ 0.13
TNFRSF1A-205ENST00000534885 DOK5Q9P104 306 aa15.86■□□□□ 0.13
TNFRSF1A-205ENST00000534885 NPBWR1P48145 328 aa15.85■□□□□ 0.13
TNFRSF1A-205ENST00000534885 C10orf91Q5T1B1 145 aa15.85■□□□□ 0.13
TNFRSF1A-205ENST00000534885 NECAP1Q8NC96 275 aa15.85■□□□□ 0.13
TNFRSF1A-205ENST00000534885 BAHCC1Q9P281 2608 aa15.85■□□□□ 0.13
TNFRSF1A-205ENST00000534885 GNG7O60262 68 aa15.85■□□□□ 0.13
TNFRSF1A-205ENST00000534885 ADCYAP1P18509 176 aa15.85■□□□□ 0.13
TNFRSF1A-205ENST00000534885 Q56UQ5 140 aa15.85■□□□□ 0.13
TNFRSF1A-205ENST00000534885 FAM78BQ5VT40 261 aa15.85■□□□□ 0.13
TNFRSF1A-205ENST00000534885 COMMD1Q8N668 190 aa15.85■□□□□ 0.13
TNFRSF1A-205ENST00000534885 PSG1P11464 419 aa15.84■□□□□ 0.13
TNFRSF1A-205ENST00000534885 RBMS3Q6XE24 437 aaKnown RBP15.84■□□□□ 0.13
TNFRSF1A-205ENST00000534885 VN1R17PQ8TDU5 208 aa15.84■□□□□ 0.13
TNFRSF1A-205ENST00000534885 TMPRSS5Q9H3S3 457 aa15.84■□□□□ 0.13
TNFRSF1A-205ENST00000534885 CARHSP1Q9Y2V2 147 aaKnown RBP15.84■□□□□ 0.13
TNFRSF1A-205ENST00000534885 RHOBP62745 196 aa15.83■□□□□ 0.13
TNFRSF1A-205ENST00000534885 GUCA2BQ16661 112 aa15.83■□□□□ 0.13
TNFRSF1A-205ENST00000534885 NPFFR1Q9GZQ6 430 aa15.83■□□□□ 0.13
TNFRSF1A-205ENST00000534885 ZNF702PQ9H963 129 aa15.83■□□□□ 0.13
TNFRSF1A-205ENST00000534885 TMEM160Q9NX00 188 aa15.83■□□□□ 0.13
TNFRSF1A-205ENST00000534885 OR2T8A6NH00 312 aa15.83■□□□□ 0.12
TNFRSF1A-205ENST00000534885 F8W036 122 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms