RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 POLR2GP62487 172 aaKnown RBP eCLIP6.7□□□□□ -1.34
CCDC90B-217ENST00000530253 EXOSC2Q13868 293 aaKnown RBP6.7□□□□□ -1.34
CCDC90B-217ENST00000530253 DEFB136Q30KP8 78 aa6.7□□□□□ -1.34
CCDC90B-217ENST00000530253 C15orf32Q32M92 178 aa6.7□□□□□ -1.34
CCDC90B-217ENST00000530253 ZNF343Q6P1L6 599 aa6.7□□□□□ -1.34
CCDC90B-217ENST00000530253 DTD1Q8TEA8 209 aa6.7□□□□□ -1.34
CCDC90B-217ENST00000530253 ZNF414Q96IQ9 312 aa6.7□□□□□ -1.34
CCDC90B-217ENST00000530253 USMG5Q96IX5 58 aa6.7□□□□□ -1.34
CCDC90B-217ENST00000530253 OR5B12Q96R08 314 aa6.7□□□□□ -1.34
CCDC90B-217ENST00000530253 C11orf1Q9H5F2 150 aa6.7□□□□□ -1.34
CCDC90B-217ENST00000530253 ZNF355PQ9NSJ1 428 aa6.7□□□□□ -1.34
CCDC90B-217ENST00000530253 CACFD1Q9UGQ2 172 aa6.7□□□□□ -1.34
CCDC90B-217ENST00000530253 RCL1Q9Y2P8 373 aaKnown RBP6.7□□□□□ -1.34
CCDC90B-217ENST00000530253 IGHV4OR15-8A0A075B7B6 117 aa6.69□□□□□ -1.34
CCDC90B-217ENST00000530253 A0A087WW49 117 aa6.69□□□□□ -1.34
CCDC90B-217ENST00000530253 A0A0G2JLM5 398 aa6.69□□□□□ -1.34
CCDC90B-217ENST00000530253 C15orf62A8K5M9 175 aa6.69□□□□□ -1.34
CCDC90B-217ENST00000530253 M0QZ24 198 aa6.69□□□□□ -1.34
CCDC90B-217ENST00000530253 GOSR2O14653 212 aa6.69□□□□□ -1.34
CCDC90B-217ENST00000530253 SYNGR2O43760 224 aa6.69□□□□□ -1.34
CCDC90B-217ENST00000530253 SIX6O95475 246 aa6.69□□□□□ -1.34
CCDC90B-217ENST00000530253 TRBV12-3P01733 135 aa6.69□□□□□ -1.34
CCDC90B-217ENST00000530253 MBPP02686 304 aaPredicted RBP6.69□□□□□ -1.34
CCDC90B-217ENST00000530253 IAPPP10997 89 aa6.69□□□□□ -1.34
CCDC90B-217ENST00000530253 DEFA4P12838 97 aa6.69□□□□□ -1.34
CCDC90B-217ENST00000530253 NKX2-1P43699 371 aaPredicted RBP6.69□□□□□ -1.34
CCDC90B-217ENST00000530253 PAX9P55771 341 aa6.69□□□□□ -1.34
CCDC90B-217ENST00000530253 H2BFSP57053 126 aa6.69□□□□□ -1.34
CCDC90B-217ENST00000530253 ERHP84090 104 aaKnown RBP6.69□□□□□ -1.34
CCDC90B-217ENST00000530253 C2orf83Q53S99 150 aa6.69□□□□□ -1.34
CCDC90B-217ENST00000530253 UXS1Q8NBZ7 420 aa6.69□□□□□ -1.34
CCDC90B-217ENST00000530253 SLC24A4Q8NFF2 622 aa6.69□□□□□ -1.34
CCDC90B-217ENST00000530253 OR1L6Q8NGR2 347 aa6.69□□□□□ -1.34
CCDC90B-217ENST00000530253 ZNF502Q8TBZ5 544 aa6.69□□□□□ -1.34
CCDC90B-217ENST00000530253 C2orf50Q96LR7 162 aa6.69□□□□□ -1.34
CCDC90B-217ENST00000530253 DUX3Q96PT4 197 aa6.69□□□□□ -1.34
CCDC90B-217ENST00000530253 MAGT1Q9H0U3 335 aa6.69□□□□□ -1.34
CCDC90B-217ENST00000530253 FNDC4Q9H6D8 234 aaPredicted RBP6.69□□□□□ -1.34
CCDC90B-217ENST00000530253 HEYLQ9NQ87 328 aaPredicted RBP6.69□□□□□ -1.34
CCDC90B-217ENST00000530253 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.68□□□□□ -1.34
CCDC90B-217ENST00000530253 C13orf42A0A1B0GVH6 325 aa6.68□□□□□ -1.34
CCDC90B-217ENST00000530253 FAM25EA8MYX2 175 aa6.68□□□□□ -1.34
CCDC90B-217ENST00000530253 PRSS46E5RG02 174 aa6.68□□□□□ -1.34
CCDC90B-217ENST00000530253 MT-CO2P00403 227 aa6.68□□□□□ -1.34
CCDC90B-217ENST00000530253 NPY1RP25929 384 aa6.68□□□□□ -1.34
CCDC90B-217ENST00000530253 SNCAP37840 140 aa6.68□□□□□ -1.34
CCDC90B-217ENST00000530253 MYCNOSP40205 109 aa6.68□□□□□ -1.34
CCDC90B-217ENST00000530253 HTR2BP41595 481 aa6.68□□□□□ -1.34
CCDC90B-217ENST00000530253 ATP5G2Q06055 141 aa6.68□□□□□ -1.34
CCDC90B-217ENST00000530253 SLC25A24Q6NUK1 477 aa6.68□□□□□ -1.34
CCDC90B-217ENST00000530253 GSG1LQ6UXU4 331 aa6.68□□□□□ -1.34
CCDC90B-217ENST00000530253 OR4F17Q8NGA8 305 aa6.68□□□□□ -1.34
CCDC90B-217ENST00000530253 VN1R17PQ8TDU5 208 aa6.68□□□□□ -1.34
CCDC90B-217ENST00000530253 OR4C12Q96R67 309 aa6.68□□□□□ -1.34
CCDC90B-217ENST00000530253 OR4F4Q96R69 305 aa6.68□□□□□ -1.34
CCDC90B-217ENST00000530253 ENY2Q9NPA8 101 aa6.68□□□□□ -1.34
CCDC90B-217ENST00000530253 MRPL36Q9P0J6 103 aaKnown RBP6.68□□□□□ -1.34
CCDC90B-217ENST00000530253 S4R3C0 116 aa6.68□□□□□ -1.34
CCDC90B-217ENST00000530253 IGHV3-21A0A0B4J1V1 117 aa6.67□□□□□ -1.34
CCDC90B-217ENST00000530253 C5orf51A6NDU8 294 aa6.67□□□□□ -1.34
CCDC90B-217ENST00000530253 K7EPK0 472 aa6.67□□□□□ -1.34
CCDC90B-217ENST00000530253 CCL24O00175 119 aa6.67□□□□□ -1.34
CCDC90B-217ENST00000530253 BMPR1BO00238 502 aa6.67□□□□□ -1.34
CCDC90B-217ENST00000530253 WRBO00258 174 aa6.67□□□□□ -1.34
CCDC90B-217ENST00000530253 SSNA1O43805 119 aa6.67□□□□□ -1.34
CCDC90B-217ENST00000530253 SSSCA1O60232 199 aa6.67□□□□□ -1.34
CCDC90B-217ENST00000530253 MED6O75586 246 aa6.67□□□□□ -1.34
CCDC90B-217ENST00000530253 SCGB1D2O95969 90 aa6.67□□□□□ -1.34
CCDC90B-217ENST00000530253 IGHV3-23P01764 117 aa6.67□□□□□ -1.34
CCDC90B-217ENST00000530253 CXCL3P19876 107 aa6.67□□□□□ -1.34
CCDC90B-217ENST00000530253 MT3P25713 68 aa6.67□□□□□ -1.34
CCDC90B-217ENST00000530253 FCGR2BP31994 310 aaPredicted RBP6.67□□□□□ -1.34
CCDC90B-217ENST00000530253 FCN2Q15485 313 aa6.67□□□□□ -1.34
CCDC90B-217ENST00000530253 OR11H1Q8NG94 326 aa6.67□□□□□ -1.34
CCDC90B-217ENST00000530253 OR11H7Q8NGC8 314 aa6.67□□□□□ -1.34
CCDC90B-217ENST00000530253 OR1N2Q8NGR9 330 aa6.67□□□□□ -1.34
CCDC90B-217ENST00000530253 RNASEH2CQ8TDP1 164 aaKnown RBP6.67□□□□□ -1.34
CCDC90B-217ENST00000530253 EEF1AKMT3Q96AZ1 226 aa6.67□□□□□ -1.34
CCDC90B-217ENST00000530253 CXorf58Q96LI9 332 aa6.67□□□□□ -1.34
CCDC90B-217ENST00000530253 ATP6V0BQ99437 205 aa6.67□□□□□ -1.34
CCDC90B-217ENST00000530253 THYN1Q9P016 225 aa6.67□□□□□ -1.34
CCDC90B-217ENST00000530253 GSKIPQ9P0R6 139 aa6.67□□□□□ -1.34
CCDC90B-217ENST00000530253 MGAT4CQ9UBM8 478 aa6.67□□□□□ -1.34
CCDC90B-217ENST00000530253 U3KQ87 197 aa6.67□□□□□ -1.34
CCDC90B-217ENST00000530253 TRBV7-1A0A0A6YYK4 115 aa6.66□□□□□ -1.34
CCDC90B-217ENST00000530253 PMS2P5A8MQ11 134 aa6.66□□□□□ -1.34
CCDC90B-217ENST00000530253 LINC01619G3V211 115 aa6.66□□□□□ -1.34
CCDC90B-217ENST00000530253 H3BP45 60 aa6.66□□□□□ -1.34
CCDC90B-217ENST00000530253 CORTO00230 105 aa6.66□□□□□ -1.34
CCDC90B-217ENST00000530253 CYB5BO43169 146 aa6.66□□□□□ -1.34
CCDC90B-217ENST00000530253 HSPB1P04792 205 aaKnown RBP6.66□□□□□ -1.34
CCDC90B-217ENST00000530253 GPR183P32249 361 aa6.66□□□□□ -1.34
CCDC90B-217ENST00000530253 SUB1P53999 127 aaKnown RBP eCLIP6.66□□□□□ -1.34
CCDC90B-217ENST00000530253 ATP5IP56385 69 aaPredicted RBP6.66□□□□□ -1.34
CCDC90B-217ENST00000530253 TAS2R30P59541 319 aa6.66□□□□□ -1.34
CCDC90B-217ENST00000530253 RRAS2P62070 204 aaPredicted RBP6.66□□□□□ -1.34
CCDC90B-217ENST00000530253 ZNF616Q08AN1 781 aa6.66□□□□□ -1.34
CCDC90B-217ENST00000530253 RAB32Q13637 225 aa6.66□□□□□ -1.34
CCDC90B-217ENST00000530253 TMEM14EPQ6UXP3 125 aa6.66□□□□□ -1.34
CCDC90B-217ENST00000530253 WFDC9Q8NEX5 89 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms