RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 SEC14L6B5MCN3 397 aa12.25□□□□□ -0.45
USP47-207ENST00000527733 CSN3P07498 182 aa12.25□□□□□ -0.45
USP47-207ENST00000527733 TSPOP30536 169 aa12.25□□□□□ -0.45
USP47-207ENST00000527733 CENPWQ5EE01 88 aa12.25□□□□□ -0.45
USP47-207ENST00000527733 RANBP2P49792 3224 aaKnown RBP12.25□□□□□ -0.45
USP47-207ENST00000527733 GUSBP1Q15486 140 aa12.25□□□□□ -0.45
USP47-207ENST00000527733 GGTLC1Q9BX51 225 aa12.25□□□□□ -0.45
USP47-207ENST00000527733 KLF2Q9Y5W3 355 aaPredicted RBP12.25□□□□□ -0.45
USP47-207ENST00000527733 SRP19P09132 144 aaKnown RBP12.25□□□□□ -0.45
USP47-207ENST00000527733 FAM3BP58499 235 aaPredicted RBP12.25□□□□□ -0.45
USP47-207ENST00000527733 LHFPL4Q7Z7J7 247 aa12.25□□□□□ -0.45
USP47-207ENST00000527733 F11RQ9Y624 299 aaKnown RBP12.25□□□□□ -0.45
USP47-207ENST00000527733 ANKRD11Q6UB99 2663 aaPredicted RBP12.25□□□□□ -0.45
USP47-207ENST00000527733 SPTBN4Q9H254 2564 aa12.25□□□□□ -0.45
USP47-207ENST00000527733 MMP23AO75900 390 aa12.25□□□□□ -0.45
USP47-207ENST00000527733 LHBP01229 141 aa12.25□□□□□ -0.45
USP47-207ENST00000527733 C15orf32Q32M92 178 aa12.25□□□□□ -0.45
USP47-207ENST00000527733 CYTL1Q9NRR1 136 aa12.25□□□□□ -0.45
USP47-207ENST00000527733 HIST1H1AQ02539 215 aaPredicted RBP12.24□□□□□ -0.45
USP47-207ENST00000527733 ZNF833PQ6ZTB9 187 aa12.24□□□□□ -0.45
USP47-207ENST00000527733 OR5AN1Q8NGI8 311 aa12.24□□□□□ -0.45
USP47-207ENST00000527733 RAX2Q96IS3 184 aa12.24□□□□□ -0.45
USP47-207ENST00000527733 FGF16O43320 207 aa12.24□□□□□ -0.45
USP47-207ENST00000527733 GPX1P07203 203 aa12.24□□□□□ -0.45
USP47-207ENST00000527733 RPS20P60866 119 aaKnown RBP12.24□□□□□ -0.45
USP47-207ENST00000527733 PEX7O00628 323 aa12.24□□□□□ -0.45
USP47-207ENST00000527733 IGHV2-70P01814 119 aa12.24□□□□□ -0.45
USP47-207ENST00000527733 MT-ND6P03923 174 aa12.24□□□□□ -0.45
USP47-207ENST00000527733 ATP5G3P48201 142 aa12.24□□□□□ -0.45
USP47-207ENST00000527733 AMTP48728 403 aa12.24□□□□□ -0.45
USP47-207ENST00000527733 DDB2Q92466 427 aa12.24□□□□□ -0.45
USP47-207ENST00000527733 IGHV1-69DA0A0B4J2H0 117 aa12.23□□□□□ -0.45
USP47-207ENST00000527733 A0A1B0GWJ7 208 aa12.23□□□□□ -0.45
USP47-207ENST00000527733 IGHV1-69P01742 117 aa12.23□□□□□ -0.45
USP47-207ENST00000527733 APCSP02743 223 aa12.23□□□□□ -0.45
USP47-207ENST00000527733 MEOX2P50222 304 aa12.23□□□□□ -0.45
USP47-207ENST00000527733 SMUG1Q53HV7 270 aa12.23□□□□□ -0.45
USP47-207ENST00000527733 KLF17Q5JT82 389 aaPredicted RBP12.23□□□□□ -0.45
USP47-207ENST00000527733 MAPK1IP1LQ8NDC0 245 aa12.23□□□□□ -0.45
USP47-207ENST00000527733 CXorf65A6NEN9 183 aa12.23□□□□□ -0.45
USP47-207ENST00000527733 C15orf62A8K5M9 175 aa12.23□□□□□ -0.45
USP47-207ENST00000527733 GPR82Q96P67 336 aa12.23□□□□□ -0.45
USP47-207ENST00000527733 CTSZQ9UBR2 303 aa12.23□□□□□ -0.45
USP47-207ENST00000527733 SPRNQ5BIV9 151 aa12.23□□□□□ -0.45
USP47-207ENST00000527733 GCSAMLQ5JQS6 135 aa12.23□□□□□ -0.45
USP47-207ENST00000527733 MBD3L1Q8WWY6 194 aa12.23□□□□□ -0.45
USP47-207ENST00000527733 Q96MF0 132 aa12.23□□□□□ -0.45
USP47-207ENST00000527733 LYL1P12980 280 aa12.22□□□□□ -0.45
USP47-207ENST00000527733 ZNF134P52741 427 aa12.22□□□□□ -0.45
USP47-207ENST00000527733 DLX1P56177 255 aa12.22□□□□□ -0.45
USP47-207ENST00000527733 ZNF562Q6V9R5 426 aa12.22□□□□□ -0.45
USP47-207ENST00000527733 PEMTQ9UBM1 199 aa12.22□□□□□ -0.45
USP47-207ENST00000527733 TRAV34A0A0B4J273 112 aa12.22□□□□□ -0.45
USP47-207ENST00000527733 A8MXK9 166 aa12.22□□□□□ -0.45
USP47-207ENST00000527733 MGPP08493 103 aa12.22□□□□□ -0.45
USP47-207ENST00000527733 PAX8Q06710 450 aa12.22□□□□□ -0.45
USP47-207ENST00000527733 OR10D4PQ8NGN7 298 aa12.22□□□□□ -0.45
USP47-207ENST00000527733 SRSF8Q9BRL6 282 aaKnown RBP12.22□□□□□ -0.45
USP47-207ENST00000527733 A0A1W2PRX2 142 aa12.22□□□□□ -0.45
USP47-207ENST00000527733 SAMD13Q5VXD3 122 aa12.22□□□□□ -0.45
USP47-207ENST00000527733 Q9H3A6 140 aa12.22□□□□□ -0.45
USP47-207ENST00000527733 MED12LQ86YW9 2145 aa12.22□□□□□ -0.45
USP47-207ENST00000527733 SCO2A0A1W2PP80 73 aa12.21□□□□□ -0.45
USP47-207ENST00000527733 PSMB11A5LHX3 300 aa12.21□□□□□ -0.45
USP47-207ENST00000527733 RNASE2P10153 161 aaKnown RBP12.21□□□□□ -0.45
USP47-207ENST00000527733 PMS2P11Q13670 270 aa12.21□□□□□ -0.45
USP47-207ENST00000527733 RUSC1-AS1Q66K80 236 aa12.21□□□□□ -0.45
USP47-207ENST00000527733 ZNF705AQ6ZN79 300 aaPredicted RBP12.21□□□□□ -0.45
USP47-207ENST00000527733 C22orf46C9J442 243 aa12.21□□□□□ -0.45
USP47-207ENST00000527733 AREGP15514 252 aa12.21□□□□□ -0.45
USP47-207ENST00000527733 DAZAP2Q15038 168 aaPredicted RBP12.21□□□□□ -0.45
USP47-207ENST00000527733 LEMD1Q68G75 181 aa12.21□□□□□ -0.45
USP47-207ENST00000527733 C8orf46Q8TAG6 207 aa12.21□□□□□ -0.45
USP47-207ENST00000527733 SFRP2Q96HF1 295 aa12.21□□□□□ -0.45
USP47-207ENST00000527733 YTHDF2Q9Y5A9 579 aaKnown RBP12.21□□□□□ -0.45
USP47-207ENST00000527733 A0A1W2PRE2 83 aa12.21□□□□□ -0.45
USP47-207ENST00000527733 TWIST1Q15672 202 aa12.21□□□□□ -0.45
USP47-207ENST00000527733 PSG1P11464 419 aa12.21□□□□□ -0.46
USP47-207ENST00000527733 KIR3DL3Q8N743 410 aa12.21□□□□□ -0.46
USP47-207ENST00000527733 CARHSP1Q9Y2V2 147 aaKnown RBP12.21□□□□□ -0.46
USP47-207ENST00000527733 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.2□□□□□ -0.46
USP47-207ENST00000527733 DEFA6Q01524 100 aa12.2□□□□□ -0.46
USP47-207ENST00000527733 TRGV9Q99603 122 aa12.2□□□□□ -0.46
USP47-207ENST00000527733 VSIRQ9H7M9 311 aa12.2□□□□□ -0.46
USP47-207ENST00000527733 TMEM14BQ9NUH8 114 aa12.2□□□□□ -0.46
USP47-207ENST00000527733 ARL2-SNX15V9GYD0 113 aa12.2□□□□□ -0.46
USP47-207ENST00000527733 PYYP10082 97 aa12.2□□□□□ -0.46
USP47-207ENST00000527733 MDKP21741 143 aaPredicted RBP12.2□□□□□ -0.46
USP47-207ENST00000527733 TAS2R60P59551 318 aa12.2□□□□□ -0.46
USP47-207ENST00000527733 EIF4E3Q8N5X7 224 aaKnown RBP12.2□□□□□ -0.46
USP47-207ENST00000527733 OTORQ9NRC9 128 aa12.2□□□□□ -0.46
USP47-207ENST00000527733 IGHV2-5P01817 119 aa12.2□□□□□ -0.46
USP47-207ENST00000527733 C1orf122Q6ZSJ8 110 aa12.2□□□□□ -0.46
USP47-207ENST00000527733 SLC50A1Q9BRV3 221 aa12.2□□□□□ -0.46
USP47-207ENST00000527733 A0A1W2PPI3 338 aa12.19□□□□□ -0.46
USP47-207ENST00000527733 SPSB3Q6PJ21 355 aa12.19□□□□□ -0.46
USP47-207ENST00000527733 IGKV1-39P01597 117 aa12.19□□□□□ -0.46
USP47-207ENST00000527733 IGKV3-20P01619 116 aa12.19□□□□□ -0.46
USP47-207ENST00000527733 HLA-DQA1P01909 254 aa12.19□□□□□ -0.46
USP47-207ENST00000527733 IGKV1D-39P04432 117 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 141.7 ms