RNA–Protein interactions for RNA: ENST00000525997.1

PUM1-216, Transcript of pumilio RNA binding family member 1, human

TSL 3

Gene PUM1, Length 650 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-216	ENST00000525997	TNP2	Q05952	138 aa		4.08	□□□□□ -1.76
PUM1-216	ENST00000525997	RPEL1	Q2QD12	228 aa		4.08	□□□□□ -1.76
PUM1-216	ENST00000525997	FAM106A	Q4KMX7	169 aa		4.08	□□□□□ -1.76
PUM1-216	ENST00000525997	PXDC1	Q5TGL8	231 aa		4.08	□□□□□ -1.76
PUM1-216	ENST00000525997	EIF5AL1	Q6IS14	154 aa	Known RBP	4.08	□□□□□ -1.76
PUM1-216	ENST00000525997	TET2	Q6N021	2002 aa	Predicted RBP	4.08	□□□□□ -1.76
PUM1-216	ENST00000525997	TEPP	Q6URK8	271 aa		4.08	□□□□□ -1.76
PUM1-216	ENST00000525997	TREML4	Q6UXN2	200 aa		4.08	□□□□□ -1.76
PUM1-216	ENST00000525997	ZNF600	Q6ZNG1	722 aa		4.08	□□□□□ -1.76
PUM1-216	ENST00000525997	TMEM217	Q8N7C4	229 aa		4.08	□□□□□ -1.76
PUM1-216	ENST00000525997	UBAC2	Q8NBM4	344 aa		4.08	□□□□□ -1.76
PUM1-216	ENST00000525997	KLHL30-AS1	Q8NEE0	82 aa		4.08	□□□□□ -1.76
PUM1-216	ENST00000525997	OR5C1	Q8NGR4	320 aa		4.08	□□□□□ -1.76
PUM1-216	ENST00000525997	ZNF502	Q8TBZ5	544 aa		4.08	□□□□□ -1.76
PUM1-216	ENST00000525997	WIPF2	Q8TF74	440 aa	Predicted RBP	4.08	□□□□□ -1.76
PUM1-216	ENST00000525997	SCARB1	Q8WTV0	552 aa		4.08	□□□□□ -1.76
PUM1-216	ENST00000525997		Q8WTZ3	238 aa		4.08	□□□□□ -1.76
PUM1-216	ENST00000525997	ACY3	Q96HD9	319 aa		4.08	□□□□□ -1.76
PUM1-216	ENST00000525997	TRGV9	Q99603	122 aa		4.08	□□□□□ -1.76
PUM1-216	ENST00000525997	GINS3	Q9BRX5	216 aa		4.08	□□□□□ -1.76
PUM1-216	ENST00000525997	RNF126	Q9BV68	326 aa		4.08	□□□□□ -1.76
PUM1-216	ENST00000525997	PARD6G	Q9BYG4	376 aa	Predicted RBP	4.08	□□□□□ -1.76
PUM1-216	ENST00000525997	GPR61	Q9BZJ8	451 aa		4.08	□□□□□ -1.76
PUM1-216	ENST00000525997	C11orf1	Q9H5F2	150 aa		4.08	□□□□□ -1.76
PUM1-216	ENST00000525997	GNB4	Q9HAV0	340 aa		4.08	□□□□□ -1.76
PUM1-216	ENST00000525997	CUBN	O60494	3623 aa		4.08	□□□□□ -1.76
PUM1-216	ENST00000525997	PLXNB1	O43157	2135 aa		4.07	□□□□□ -1.76
PUM1-216	ENST00000525997	UBE2L5P	A0A1B0GUS4	154 aa		4.07	□□□□□ -1.76
PUM1-216	ENST00000525997		A0A1B0GVG6	124 aa		4.07	□□□□□ -1.76
PUM1-216	ENST00000525997	IGSF23	A1L1A6	192 aa		4.07	□□□□□ -1.76
PUM1-216	ENST00000525997	PMS2P5	A8MQ11	134 aa		4.07	□□□□□ -1.76
PUM1-216	ENST00000525997	LINC01619	G3V211	115 aa		4.07	□□□□□ -1.76
PUM1-216	ENST00000525997	BMPR1B	O00238	502 aa		4.07	□□□□□ -1.76
PUM1-216	ENST00000525997	NDUFA4	O00483	81 aa		4.07	□□□□□ -1.76
PUM1-216	ENST00000525997	TMEM50A	O95807	157 aa		4.07	□□□□□ -1.76
PUM1-216	ENST00000525997	CLEC3B	P05452	202 aa		4.07	□□□□□ -1.76
PUM1-216	ENST00000525997	CD28	P10747	220 aa		4.07	□□□□□ -1.76
PUM1-216	ENST00000525997	TPT1	P13693	172 aa	Known RBP	4.07	□□□□□ -1.76
PUM1-216	ENST00000525997	FGF7	P21781	194 aa		4.07	□□□□□ -1.76
PUM1-216	ENST00000525997	GPR183	P32249	361 aa		4.07	□□□□□ -1.76
PUM1-216	ENST00000525997	MFAP2	P55001	183 aa		4.07	□□□□□ -1.76
PUM1-216	ENST00000525997	SRSF2	Q01130	221 aa	Known RBP	4.07	□□□□□ -1.76
PUM1-216	ENST00000525997	ZNF616	Q08AN1	781 aa		4.07	□□□□□ -1.76
PUM1-216	ENST00000525997	CLINT1	Q14677	625 aa		4.07	□□□□□ -1.76
PUM1-216	ENST00000525997	VWC2	Q2TAL6	325 aa		4.07	□□□□□ -1.76
PUM1-216	ENST00000525997	TM4SF20	Q53R12	229 aa		4.07	□□□□□ -1.76
PUM1-216	ENST00000525997	CLEC19A	Q6UXS0	136 aa		4.07	□□□□□ -1.76
PUM1-216	ENST00000525997		Q6ZRG5	221 aa		4.07	□□□□□ -1.76
PUM1-216	ENST00000525997	C1QL4	Q86Z23	238 aa		4.07	□□□□□ -1.76
PUM1-216	ENST00000525997	KCNRG	Q8N5I3	272 aa		4.07	□□□□□ -1.76
PUM1-216	ENST00000525997	BPIFC	Q8NFQ6	507 aa		4.07	□□□□□ -1.76
PUM1-216	ENST00000525997	OR1N2	Q8NGR9	330 aa		4.07	□□□□□ -1.76
PUM1-216	ENST00000525997	MARC2	Q969Z3	335 aa		4.07	□□□□□ -1.76
PUM1-216	ENST00000525997	GNPNAT1	Q96EK6	184 aa	Predicted RBP	4.07	□□□□□ -1.76
PUM1-216	ENST00000525997	CITED1	Q99966	193 aa		4.07	□□□□□ -1.76
PUM1-216	ENST00000525997	CITED2	Q99967	270 aa	Predicted RBP	4.07	□□□□□ -1.76
PUM1-216	ENST00000525997	ARPC5L	Q9BPX5	153 aa		4.07	□□□□□ -1.76
PUM1-216	ENST00000525997	NEURL2	Q9BR09	285 aa		4.07	□□□□□ -1.76
PUM1-216	ENST00000525997	MCRIP2	Q9BUT9	160 aa	Known RBP	4.07	□□□□□ -1.76
PUM1-216	ENST00000525997	ARL6	Q9H0F7	186 aa		4.07	□□□□□ -1.76
PUM1-216	ENST00000525997	FNDC4	Q9H6D8	234 aa	Predicted RBP	4.07	□□□□□ -1.76
PUM1-216	ENST00000525997	TMEM231	Q9H6L2	316 aa		4.07	□□□□□ -1.76
PUM1-216	ENST00000525997	PEMT	Q9UBM1	199 aa		4.07	□□□□□ -1.76
PUM1-216	ENST00000525997	FBXL17	Q9UF56	701 aa		4.07	□□□□□ -1.76
PUM1-216	ENST00000525997	UFC1	Q9Y3C8	167 aa		4.07	□□□□□ -1.76
PUM1-216	ENST00000525997	STAB1	Q9NY15	2570 aa		4.06	□□□□□ -1.76
PUM1-216	ENST00000525997		A0A1W2PS18	150 aa		4.06	□□□□□ -1.76
PUM1-216	ENST00000525997	ANKRD34B	A5PLL1	514 aa		4.06	□□□□□ -1.76
PUM1-216	ENST00000525997	MFSD2B	A6NFX1	497 aa		4.06	□□□□□ -1.76
PUM1-216	ENST00000525997	OR2T8	A6NH00	312 aa		4.06	□□□□□ -1.76
PUM1-216	ENST00000525997	PRSS46	E5RG02	174 aa		4.06	□□□□□ -1.76
PUM1-216	ENST00000525997	SMLR1	H3BR10	107 aa		4.06	□□□□□ -1.76
PUM1-216	ENST00000525997		I3L521	148 aa		4.06	□□□□□ -1.76
PUM1-216	ENST00000525997	CCL24	O00175	119 aa		4.06	□□□□□ -1.76
PUM1-216	ENST00000525997	BCL2L11	O43521	198 aa		4.06	□□□□□ -1.76
PUM1-216	ENST00000525997	TOMM40	O96008	361 aa		4.06	□□□□□ -1.76
PUM1-216	ENST00000525997	IGHV3-11	P01762	117 aa		4.06	□□□□□ -1.76
PUM1-216	ENST00000525997	MB	P02144	154 aa		4.06	□□□□□ -1.76
PUM1-216	ENST00000525997	CD5	P06127	495 aa		4.06	□□□□□ -1.76
PUM1-216	ENST00000525997	HNRNPC	P07910	306 aa	Known RBP eCLIP	4.06	□□□□□ -1.76
PUM1-216	ENST00000525997	IGLC1	P0CG04	106 aa		4.06	□□□□□ -1.76
PUM1-216	ENST00000525997	RD3L	P0DJH9	198 aa		4.06	□□□□□ -1.76
PUM1-216	ENST00000525997	CAMLG	P49069	296 aa		4.06	□□□□□ -1.76
PUM1-216	ENST00000525997	EIF2B2	P49770	351 aa	Known RBP	4.06	□□□□□ -1.76
PUM1-216	ENST00000525997	ELL	P55199	621 aa	Predicted RBP	4.06	□□□□□ -1.76
PUM1-216	ENST00000525997	SERF2	P84101	59 aa		4.06	□□□□□ -1.76
PUM1-216	ENST00000525997	NHLH2	Q02577	135 aa		4.06	□□□□□ -1.76
PUM1-216	ENST00000525997	GAMT	Q14353	236 aa		4.06	□□□□□ -1.76
PUM1-216	ENST00000525997	LCE2A	Q5TA79	106 aa	Predicted RBP	4.06	□□□□□ -1.76
PUM1-216	ENST00000525997	BTNL8	Q6UX41	500 aa		4.06	□□□□□ -1.76
PUM1-216	ENST00000525997	LCNL1	Q6ZST4	164 aa		4.06	□□□□□ -1.76
PUM1-216	ENST00000525997	CYP2G1P	Q6ZSU1	146 aa		4.06	□□□□□ -1.76
PUM1-216	ENST00000525997	GPHB5	Q86YW7	130 aa		4.06	□□□□□ -1.76
PUM1-216	ENST00000525997	THAP8	Q8NA92	274 aa		4.06	□□□□□ -1.76
PUM1-216	ENST00000525997	OR11H1	Q8NG94	326 aa		4.06	□□□□□ -1.76
PUM1-216	ENST00000525997	OR51G1	Q8NGK1	321 aa		4.06	□□□□□ -1.76
PUM1-216	ENST00000525997	OR1L4	Q8NGR5	311 aa		4.06	□□□□□ -1.76
PUM1-216	ENST00000525997	TMEM170A	Q8WVE7	144 aa		4.06	□□□□□ -1.76
PUM1-216	ENST00000525997	NPIPB3	Q92617	1050 aa		4.06	□□□□□ -1.76
PUM1-216	ENST00000525997	GRAMD2B	Q96HH9	432 aa		4.06	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms