RNA–Protein interactions for RNA: ENST00000525201.5

TSPAN4-214, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-214ENST00000525201 VAMP1P23763 118 aa12.93□□□□□ -0.34
TSPAN4-214ENST00000525201 RPL11P62913 178 aaKnown RBP12.93□□□□□ -0.34
TSPAN4-214ENST00000525201 RBMS2Q15434 407 aaKnown RBP12.93□□□□□ -0.34
TSPAN4-214ENST00000525201 TRIQKQ629K1 86 aa12.93□□□□□ -0.34
TSPAN4-214ENST00000525201 DTD1Q8TEA8 209 aa12.93□□□□□ -0.34
TSPAN4-214ENST00000525201 Q8WTZ3 238 aa12.93□□□□□ -0.34
TSPAN4-214ENST00000525201 NAP1L6A6NFF2 107 aa12.92□□□□□ -0.34
TSPAN4-214ENST00000525201 OR10J1P30954 320 aa12.92□□□□□ -0.34
TSPAN4-214ENST00000525201 NUP62P37198 522 aaPredicted RBP12.92□□□□□ -0.34
TSPAN4-214ENST00000525201 RND2P52198 227 aa12.92□□□□□ -0.34
TSPAN4-214ENST00000525201 YPEL3P61236 119 aaPredicted RBP12.92□□□□□ -0.34
TSPAN4-214ENST00000525201 SUPT4H1P63272 117 aaKnown RBP12.92□□□□□ -0.34
TSPAN4-214ENST00000525201 FAM90A2PQ658T7 463 aa12.92□□□□□ -0.34
TSPAN4-214ENST00000525201 ZFAND6Q6FIF0 208 aa12.92□□□□□ -0.34
TSPAN4-214ENST00000525201 LYZL2Q7Z4W2 148 aa12.92□□□□□ -0.34
TSPAN4-214ENST00000525201 CENPSQ8N2Z9 138 aa12.92□□□□□ -0.34
TSPAN4-214ENST00000525201 ST8SIA2Q92186 375 aa12.92□□□□□ -0.34
TSPAN4-214ENST00000525201 PFDN2Q9UHV9 154 aa12.92□□□□□ -0.34
TSPAN4-214ENST00000525201 IGKV3-7A0A075B6H7 116 aa12.91□□□□□ -0.34
TSPAN4-214ENST00000525201 FAM90A26D6RGX4 464 aa12.91□□□□□ -0.34
TSPAN4-214ENST00000525201 MED6O75586 246 aa12.91□□□□□ -0.34
TSPAN4-214ENST00000525201 NXPH3O95157 252 aa12.91□□□□□ -0.34
TSPAN4-214ENST00000525201 FABP1P07148 127 aa12.91□□□□□ -0.34
TSPAN4-214ENST00000525201 SLC25A6P12236 298 aa12.91□□□□□ -0.34
TSPAN4-214ENST00000525201 CRYBB3P26998 211 aa12.91□□□□□ -0.34
TSPAN4-214ENST00000525201 TFPI2P48307 235 aa12.91□□□□□ -0.34
TSPAN4-214ENST00000525201 UBE2MP61081 183 aaKnown RBP12.91□□□□□ -0.34
TSPAN4-214ENST00000525201 RPP30P78346 268 aaKnown RBP12.91□□□□□ -0.34
TSPAN4-214ENST00000525201 ZNF846Q147U1 533 aa12.91□□□□□ -0.34
TSPAN4-214ENST00000525201 PRSS54Q6PEW0 395 aa12.91□□□□□ -0.34
TSPAN4-214ENST00000525201 WFDC3Q8IUB2 231 aa12.91□□□□□ -0.34
TSPAN4-214ENST00000525201 TMEM217Q8N7C4 229 aa12.91□□□□□ -0.34
TSPAN4-214ENST00000525201 LRTM2Q8N967 370 aa12.91□□□□□ -0.34
TSPAN4-214ENST00000525201 ZNF414Q96IQ9 312 aa12.91□□□□□ -0.34
TSPAN4-214ENST00000525201 WDR12Q9GZL7 423 aaKnown RBP12.91□□□□□ -0.34
TSPAN4-214ENST00000525201 TMED3Q9Y3Q3 217 aa12.91□□□□□ -0.34
TSPAN4-214ENST00000525201 IGHV3OR16-13A0A075B7E8 117 aa12.9□□□□□ -0.34
TSPAN4-214ENST00000525201 IGHV3-74A0A0B4J1X5 117 aa12.9□□□□□ -0.34
TSPAN4-214ENST00000525201 HELTA6NFD8 242 aa12.9□□□□□ -0.34
TSPAN4-214ENST00000525201 CENPXA8MT69 81 aa12.9□□□□□ -0.34
TSPAN4-214ENST00000525201 SPRY2O43597 315 aa12.9□□□□□ -0.34
TSPAN4-214ENST00000525201 IFNA4P05014 189 aa12.9□□□□□ -0.34
TSPAN4-214ENST00000525201 IGLC1P0CG04 106 aa12.9□□□□□ -0.34
TSPAN4-214ENST00000525201 AP2S1P53680 142 aaPredicted RBP12.9□□□□□ -0.34
TSPAN4-214ENST00000525201 RAB11AP62491 216 aa12.9□□□□□ -0.34
TSPAN4-214ENST00000525201 BAK1Q16611 211 aa12.9□□□□□ -0.34
TSPAN4-214ENST00000525201 CIB3Q96Q77 187 aaPredicted RBP12.9□□□□□ -0.34
TSPAN4-214ENST00000525201 OVOL2Q9BRP0 275 aa12.9□□□□□ -0.34
TSPAN4-214ENST00000525201 MS4A6AQ9H2W1 248 aa12.9□□□□□ -0.34
TSPAN4-214ENST00000525201 MAP6D1Q9H9H5 199 aa12.9□□□□□ -0.34
TSPAN4-214ENST00000525201 IGKV1-17P01599 117 aa12.89□□□□□ -0.35
TSPAN4-214ENST00000525201 HNRNPCP07910 306 aaKnown RBP eCLIP12.89□□□□□ -0.35
TSPAN4-214ENST00000525201 P2RY1P47900 373 aa12.89□□□□□ -0.35
TSPAN4-214ENST00000525201 TIGITQ495A1 244 aa12.89□□□□□ -0.35
TSPAN4-214ENST00000525201 GBGT1Q8N5D6 347 aa12.89□□□□□ -0.35
TSPAN4-214ENST00000525201 SLC35E1Q96K37 410 aa12.89□□□□□ -0.35
TSPAN4-214ENST00000525201 RBKSQ9H477 322 aa12.89□□□□□ -0.35
TSPAN4-214ENST00000525201 PRR13Q9NZ81 148 aa12.89□□□□□ -0.35
TSPAN4-214ENST00000525201 RABAC1Q9UI14 185 aa12.89□□□□□ -0.35
TSPAN4-214ENST00000525201 HUWE1Q7Z6Z7 4374 aaKnown RBP12.89□□□□□ -0.35
TSPAN4-214ENST00000525201 JTBO76095 146 aa12.88□□□□□ -0.35
TSPAN4-214ENST00000525201 SFT2D2O95562 160 aa12.88□□□□□ -0.35
TSPAN4-214ENST00000525201 DEFB135Q30KP9 77 aa12.88□□□□□ -0.35
TSPAN4-214ENST00000525201 GATAD1Q8WUU5 269 aa12.88□□□□□ -0.35
TSPAN4-214ENST00000525201 ACY3Q96HD9 319 aa12.88□□□□□ -0.35
TSPAN4-214ENST00000525201 MRPL36Q9P0J6 103 aaKnown RBP12.88□□□□□ -0.35
TSPAN4-214ENST00000525201 MPTX1A8MV57 137 aa12.87□□□□□ -0.35
TSPAN4-214ENST00000525201 TOMM40O96008 361 aa12.87□□□□□ -0.35
TSPAN4-214ENST00000525201 RD3LP0DJH9 198 aa12.87□□□□□ -0.35
TSPAN4-214ENST00000525201 RPL35AP18077 110 aaKnown RBP12.87□□□□□ -0.35
TSPAN4-214ENST00000525201 GPX4P36969 197 aaPredicted RBP12.87□□□□□ -0.35
TSPAN4-214ENST00000525201 MLANAQ16655 118 aa12.87□□□□□ -0.35
TSPAN4-214ENST00000525201 APRG1Q8IVJ8 170 aa12.87□□□□□ -0.35
TSPAN4-214ENST00000525201 STXBP6Q8NFX7 210 aa12.87□□□□□ -0.35
TSPAN4-214ENST00000525201 NPIPB3Q92617 1050 aa12.87□□□□□ -0.35
TSPAN4-214ENST00000525201 RNF183Q96D59 192 aa12.87□□□□□ -0.35
TSPAN4-214ENST00000525201 C7orf50Q9BRJ6 194 aaKnown RBP12.87□□□□□ -0.35
TSPAN4-214ENST00000525201 CCDC32Q9BV29 185 aa12.87□□□□□ -0.35
TSPAN4-214ENST00000525201 CSTL1Q9H114 145 aa12.87□□□□□ -0.35
TSPAN4-214ENST00000525201 IGHV3-66A0A0C4DH42 116 aa12.86□□□□□ -0.35
TSPAN4-214ENST00000525201 LCE6AA0A183 80 aa12.86□□□□□ -0.35
TSPAN4-214ENST00000525201 APOHP02749 345 aaPredicted RBP12.86□□□□□ -0.35
TSPAN4-214ENST00000525201 IL4P05112 153 aa12.86□□□□□ -0.35
TSPAN4-214ENST00000525201 ATF4P18848 351 aaPredicted RBP12.86□□□□□ -0.35
TSPAN4-214ENST00000525201 PPP1R1AQ13522 171 aa12.86□□□□□ -0.35
TSPAN4-214ENST00000525201 TMEM41BQ5BJD5 291 aa12.86□□□□□ -0.35
TSPAN4-214ENST00000525201 ZFP92A6NM28 416 aa12.85□□□□□ -0.35
TSPAN4-214ENST00000525201 PITX3O75364 302 aa12.85□□□□□ -0.35
TSPAN4-214ENST00000525201 IL7P13232 177 aa12.85□□□□□ -0.35
TSPAN4-214ENST00000525201 STHQ8IWL8 128 aa12.85□□□□□ -0.35
TSPAN4-214ENST00000525201 OR51G1Q8NGK1 321 aa12.85□□□□□ -0.35
TSPAN4-214ENST00000525201 COQ8AQ8NI60 647 aa12.85□□□□□ -0.35
TSPAN4-214ENST00000525201 NDUFB6O95139 128 aa12.84□□□□□ -0.35
TSPAN4-214ENST00000525201 DEFB131AP59861 70 aa12.84□□□□□ -0.35
TSPAN4-214ENST00000525201 OR8G2PQ6IF36 304 aa12.84□□□□□ -0.35
TSPAN4-214ENST00000525201 LYG2Q86SG7 212 aa12.84□□□□□ -0.35
TSPAN4-214ENST00000525201 TMEM170AQ8WVE7 144 aa12.84□□□□□ -0.35
TSPAN4-214ENST00000525201 K7EQG2 157 aa12.83□□□□□ -0.36
TSPAN4-214ENST00000525201 SYNGR2O43760 224 aa12.83□□□□□ -0.36
TSPAN4-214ENST00000525201 CFDP00746 253 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 145.8 ms