RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 FCN1O00602 326 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 RAMP3O60896 148 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 SNAPC5O75971 98 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 ATG12O94817 140 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 OR2A4O95047 310 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 S1PR2O95136 353 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 NDUFA3O95167 84 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 SFT2D2O95562 160 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 CDS2O95674 445 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 IGHG2P01859 326 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 HLA-DRB1P01911 266 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 TCRBP04435 133 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 SERPINE2P07093 398 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 OR5AC1P0C628 307 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 RPA2P15927 270 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 NQO2P16083 231 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 AKR1C4P17516 323 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 UCP1P25874 307 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 CNTFRP26992 372 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 SLC6A1P30531 599 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 RAG2P55895 527 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 TAS2R31P59538 309 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 DEFA1P59665 94 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 DEFA3P59666 94 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 UBE2MP61081 183 aaKnown RBP2.39□□□□□ -2.03
VPS13B-209ENST00000521559 GAMTQ14353 236 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 FXYD3Q14802 87 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 PLGLAQ15195 96 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 PRSS8Q16651 343 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 KRTAP21-3Q3LHN1 58 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 SP6Q3SY56 376 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 TMEM128Q5BJH2 165 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 ZNF562Q6V9R5 426 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 TMED4Q7Z7H5 227 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 PPP1R27Q86WC6 154 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 SELENOHQ8IZQ5 122 aaKnown RBP2.39□□□□□ -2.03
VPS13B-209ENST00000521559 PUSL1Q8N0Z8 303 aaKnown RBP2.39□□□□□ -2.03
VPS13B-209ENST00000521559 FAM71E2Q8N5Q1 922 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 CSNK1G2-AS1Q8NCQ2 148 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 DUSP18Q8NEJ0 188 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 OR4A5Q8NH83 315 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 LINC01006Q8NI28 216 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 VSTM2AQ8TAG5 236 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 TMEM167AQ8TBQ9 72 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 GLYATL2Q8WU03 294 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 C11orf52Q96A22 123 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 TMEM230Q96A57 120 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 GALNT14Q96FL9 552 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 TMEM56Q96MV1 263 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 OR2A7Q96R45 310 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 TP53RKQ96S44 253 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 C19orf24Q9BVV8 132 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 TMEM222Q9H0R3 208 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 ALX4Q9H161 411 aaPredicted RBP2.39□□□□□ -2.03
VPS13B-209ENST00000521559 OR51J1Q9H342 316 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 FBXL15Q9H469 300 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 NAA60Q9H7X0 242 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 BEX1Q9HBH7 125 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 PALMDQ9NP74 551 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 BET1LQ9NYM9 111 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 TECRQ9NZ01 308 aaKnown RBP2.39□□□□□ -2.03
VPS13B-209ENST00000521559 COMMD9Q9P000 198 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 FLVCR2Q9UPI3 526 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 SIGLEC9Q9Y336 463 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 TMEM56-RWDD3S4R434 201 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 ANKRD17O75179 2603 aaKnown RBP2.39□□□□□ -2.03
VPS13B-209ENST00000521559 F8P00451 2351 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 DCHS2Q6V1P9 2916 aa2.38□□□□□ -2.03
VPS13B-209ENST00000521559 FN1P02751 2386 aaKnown RBP2.38□□□□□ -2.03
VPS13B-209ENST00000521559 ACANP16112 2415 aa2.38□□□□□ -2.03
VPS13B-209ENST00000521559 TRAV6A0A075B6T7 132 aa2.38□□□□□ -2.03
VPS13B-209ENST00000521559 TRAV3A0A0B4J244 114 aa2.38□□□□□ -2.03
VPS13B-209ENST00000521559 A0A0B4J2A0 478 aa2.38□□□□□ -2.03
VPS13B-209ENST00000521559 C9orf170A2RU37 121 aa2.38□□□□□ -2.03
VPS13B-209ENST00000521559 ARPC1BO15143 372 aaKnown RBP2.38□□□□□ -2.03
VPS13B-209ENST00000521559 CREBL2O60519 120 aaPredicted RBP2.38□□□□□ -2.03
VPS13B-209ENST00000521559 KBTBD11O94819 623 aa2.38□□□□□ -2.03
VPS13B-209ENST00000521559 CNIH1O95406 144 aa2.38□□□□□ -2.03
VPS13B-209ENST00000521559 CA2P00918 260 aa2.38□□□□□ -2.03
VPS13B-209ENST00000521559 KRASP01116 189 aa2.38□□□□□ -2.03
VPS13B-209ENST00000521559 IGKV1-39P01597 117 aa2.38□□□□□ -2.03
VPS13B-209ENST00000521559 IGKV1-5P01602 117 aa2.38□□□□□ -2.03
VPS13B-209ENST00000521559 IGKV1D-39P04432 117 aa2.38□□□□□ -2.03
VPS13B-209ENST00000521559 IGF1P05019 195 aa2.38□□□□□ -2.03
VPS13B-209ENST00000521559 IL5P05113 134 aa2.38□□□□□ -2.03
VPS13B-209ENST00000521559 P0C879 139 aa2.38□□□□□ -2.03
VPS13B-209ENST00000521559 SAA1P0DJI8 122 aaPredicted RBP2.38□□□□□ -2.03
VPS13B-209ENST00000521559 ANXA3P12429 323 aa2.38□□□□□ -2.03
VPS13B-209ENST00000521559 HLA-GP17693 338 aa2.38□□□□□ -2.03
VPS13B-209ENST00000521559 MDKP21741 143 aaPredicted RBP2.38□□□□□ -2.03
VPS13B-209ENST00000521559 MAS1LP35410 378 aa2.38□□□□□ -2.03
VPS13B-209ENST00000521559 G6PCP35575 357 aa2.38□□□□□ -2.03
VPS13B-209ENST00000521559 ID1P41134 155 aa2.38□□□□□ -2.03
VPS13B-209ENST00000521559 VDAC2P45880 294 aaPredicted RBP2.38□□□□□ -2.03
VPS13B-209ENST00000521559 RAB25P57735 213 aa2.38□□□□□ -2.03
VPS13B-209ENST00000521559 RPL8P62917 257 aaKnown RBP2.38□□□□□ -2.03
VPS13B-209ENST00000521559 SUPT4H1P63272 117 aaKnown RBP2.38□□□□□ -2.03
VPS13B-209ENST00000521559 TMEM267Q0VDI3 215 aaPredicted RBP2.38□□□□□ -2.03
VPS13B-209ENST00000521559 PJVKQ0ZLH3 352 aa2.38□□□□□ -2.03
VPS13B-209ENST00000521559 PPP1R1AQ13522 171 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms