RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 IGKV1-17P01599 117 aa13.77□□□□□ -0.21
VEGFA-222ENST00000520948 IGLC1P0CG04 106 aa13.77□□□□□ -0.21
VEGFA-222ENST00000520948 RND2P52198 227 aa13.77□□□□□ -0.21
VEGFA-222ENST00000520948 FCN2Q15485 313 aa13.77□□□□□ -0.21
VEGFA-222ENST00000520948 ADAMTSL5Q6ZMM2 481 aa13.77□□□□□ -0.21
VEGFA-222ENST00000520948 OR11H7Q8NGC8 314 aa13.77□□□□□ -0.21
VEGFA-222ENST00000520948 NPIPB3Q92617 1050 aa13.77□□□□□ -0.21
VEGFA-222ENST00000520948 MED28Q9H204 178 aa13.77□□□□□ -0.21
VEGFA-222ENST00000520948 ZMAT5Q9UDW3 170 aaKnown RBP13.77□□□□□ -0.21
VEGFA-222ENST00000520948 H0YIZ8 118 aa13.76□□□□□ -0.21
VEGFA-222ENST00000520948 DEDDO75618 318 aa13.76□□□□□ -0.21
VEGFA-222ENST00000520948 CCNKO75909 580 aa13.76□□□□□ -0.21
VEGFA-222ENST00000520948 NHLRC4P0CG21 123 aaPredicted RBP13.76□□□□□ -0.21
VEGFA-222ENST00000520948 ELLP55199 621 aaPredicted RBP13.76□□□□□ -0.21
VEGFA-222ENST00000520948 RELQ04864 619 aaPredicted RBP13.76□□□□□ -0.21
VEGFA-222ENST00000520948 ASCL2Q99929 193 aa13.76□□□□□ -0.21
VEGFA-222ENST00000520948 ELOVL1Q9BW60 279 aa13.76□□□□□ -0.21
VEGFA-222ENST00000520948 PEMTQ9UBM1 199 aa13.76□□□□□ -0.21
VEGFA-222ENST00000520948 PAIP2BQ9ULR5 123 aaKnown RBP13.76□□□□□ -0.21
VEGFA-222ENST00000520948 LSM4Q9Y4Z0 139 aaKnown RBP13.76□□□□□ -0.21
VEGFA-222ENST00000520948 L7N2F9 121 aa13.75□□□□□ -0.21
VEGFA-222ENST00000520948 C8orf88P0DMB2 117 aa13.75□□□□□ -0.21
VEGFA-222ENST00000520948 S100A10P60903 97 aa13.75□□□□□ -0.21
VEGFA-222ENST00000520948 RRAS2P62070 204 aaPredicted RBP13.75□□□□□ -0.21
VEGFA-222ENST00000520948 VAMP2P63027 116 aa13.75□□□□□ -0.21
VEGFA-222ENST00000520948 ARL16Q0P5N6 197 aa13.75□□□□□ -0.21
VEGFA-222ENST00000520948 HAPLN4Q86UW8 402 aa13.75□□□□□ -0.21
VEGFA-222ENST00000520948 PPP1R1CQ8WVI7 109 aa13.75□□□□□ -0.21
VEGFA-222ENST00000520948 TMEM190Q8WZ59 177 aa13.75□□□□□ -0.21
VEGFA-222ENST00000520948 RNF126Q9BV68 326 aa13.75□□□□□ -0.21
VEGFA-222ENST00000520948 IGKV1D-37A0A075B6S9 117 aa13.74□□□□□ -0.21
VEGFA-222ENST00000520948 ZNF320A2RRD8 509 aa13.74□□□□□ -0.21
VEGFA-222ENST00000520948 TMEM213A2RRL7 107 aa13.74□□□□□ -0.21
VEGFA-222ENST00000520948 FAM24AA6NFZ4 105 aa13.74□□□□□ -0.21
VEGFA-222ENST00000520948 C2orf70A6NJV1 201 aa13.74□□□□□ -0.21
VEGFA-222ENST00000520948 K7EMT4 169 aa13.74□□□□□ -0.21
VEGFA-222ENST00000520948 SAP30O75446 220 aa13.74□□□□□ -0.21
VEGFA-222ENST00000520948 METTL15P1P0C7V9 234 aa13.74□□□□□ -0.21
VEGFA-222ENST00000520948 PVALBP20472 110 aaPredicted RBP13.74□□□□□ -0.21
VEGFA-222ENST00000520948 EDN2P20800 178 aa13.74□□□□□ -0.21
VEGFA-222ENST00000520948 YPEL3P61236 119 aaPredicted RBP13.74□□□□□ -0.21
VEGFA-222ENST00000520948 TIGITQ495A1 244 aa13.74□□□□□ -0.21
VEGFA-222ENST00000520948 TM4SF20Q53R12 229 aa13.74□□□□□ -0.21
VEGFA-222ENST00000520948 ZNF600Q6ZNG1 722 aa13.74□□□□□ -0.21
VEGFA-222ENST00000520948 OR1S2Q8NGQ3 325 aa13.74□□□□□ -0.21
VEGFA-222ENST00000520948 ACY3Q96HD9 319 aa13.74□□□□□ -0.21
VEGFA-222ENST00000520948 LYRM2Q9NU23 88 aaPredicted RBP13.74□□□□□ -0.21
VEGFA-222ENST00000520948 IGKV1OR2-108A0A075B7D4 117 aa13.73□□□□□ -0.21
VEGFA-222ENST00000520948 MPC2O95563 127 aa13.73□□□□□ -0.21
VEGFA-222ENST00000520948 IGLV1-51P01701 117 aa13.73□□□□□ -0.21
VEGFA-222ENST00000520948 RLN2P04090 185 aa13.73□□□□□ -0.21
VEGFA-222ENST00000520948 CBLN1P23435 193 aa13.73□□□□□ -0.21
VEGFA-222ENST00000520948 OR10J1P30954 320 aa13.73□□□□□ -0.21
VEGFA-222ENST00000520948 DLK1P80370 383 aa13.73□□□□□ -0.21
VEGFA-222ENST00000520948 OR8G2PQ6IF36 304 aa13.73□□□□□ -0.21
VEGFA-222ENST00000520948 TOMM20LQ6UXN7 152 aa13.73□□□□□ -0.21
VEGFA-222ENST00000520948 TMEM252Q8N6L7 170 aa13.73□□□□□ -0.21
VEGFA-222ENST00000520948 THAP8Q8NA92 274 aa13.73□□□□□ -0.21
VEGFA-222ENST00000520948 SLC35E1Q96K37 410 aa13.73□□□□□ -0.21
VEGFA-222ENST00000520948 ZFAND3Q9H8U3 227 aa13.73□□□□□ -0.21
VEGFA-222ENST00000520948 OR5AC2Q9NZP5 309 aa13.73□□□□□ -0.21
VEGFA-222ENST00000520948 UFC1Q9Y3C8 167 aa13.73□□□□□ -0.21
VEGFA-222ENST00000520948 E5RGE8 158 aa13.72□□□□□ -0.21
VEGFA-222ENST00000520948 FNDC10F2Z333 226 aa13.72□□□□□ -0.21
VEGFA-222ENST00000520948 FOLR2P14207 255 aa13.72□□□□□ -0.21
VEGFA-222ENST00000520948 LRRC37A5PQ49AS3 106 aa13.72□□□□□ -0.21
VEGFA-222ENST00000520948 OR10P1Q8NGE3 313 aa13.72□□□□□ -0.21
VEGFA-222ENST00000520948 PUS1Q9Y606 427 aaKnown RBP eCLIP13.72□□□□□ -0.21
VEGFA-222ENST00000520948 IGSF23A1L1A6 192 aa13.71□□□□□ -0.21
VEGFA-222ENST00000520948 LYL1P12980 280 aa13.71□□□□□ -0.21
VEGFA-222ENST00000520948 P2RY1P47900 373 aa13.71□□□□□ -0.21
VEGFA-222ENST00000520948 BCAP31P51572 246 aa13.71□□□□□ -0.21
VEGFA-222ENST00000520948 CAV2P51636 162 aa13.71□□□□□ -0.21
VEGFA-222ENST00000520948 ACOT7LQ6ZUV0 252 aa13.71□□□□□ -0.21
VEGFA-222ENST00000520948 TMEM144Q7Z5S9 345 aa13.71□□□□□ -0.21
VEGFA-222ENST00000520948 GGACTQ9BVM4 153 aa13.71□□□□□ -0.21
VEGFA-222ENST00000520948 DAZ1Q9NQZ3 744 aaKnown RBP13.71□□□□□ -0.21
VEGFA-222ENST00000520948 MRPL27Q9P0M9 148 aaKnown RBP13.71□□□□□ -0.21
VEGFA-222ENST00000520948 IGHV3OR16-8A0A075B7F1 116 aa13.7□□□□□ -0.22
VEGFA-222ENST00000520948 SCGB2A1O75556 95 aa13.7□□□□□ -0.22
VEGFA-222ENST00000520948 TOMM40O96008 361 aa13.7□□□□□ -0.22
VEGFA-222ENST00000520948 SULT1A1P50225 295 aa13.7□□□□□ -0.22
VEGFA-222ENST00000520948 MARC2Q969Z3 335 aa13.7□□□□□ -0.22
VEGFA-222ENST00000520948 TRGV9Q99603 122 aa13.7□□□□□ -0.22
VEGFA-222ENST00000520948 TRAV14DV4A0A0A6YYC5 116 aa13.69□□□□□ -0.22
VEGFA-222ENST00000520948 SCAF4O95104 1147 aaKnown RBP13.69□□□□□ -0.22
VEGFA-222ENST00000520948 GIPP09681 153 aaPredicted RBP13.69□□□□□ -0.22
VEGFA-222ENST00000520948 DEFB114Q30KQ6 69 aa13.69□□□□□ -0.22
VEGFA-222ENST00000520948 Q6ZNX1 250 aa13.69□□□□□ -0.22
VEGFA-222ENST00000520948 Q8WTZ3 238 aa13.69□□□□□ -0.22
VEGFA-222ENST00000520948 ASB13Q8WXK3 278 aa13.69□□□□□ -0.22
VEGFA-222ENST00000520948 C20orf24Q9BUV8 137 aa13.69□□□□□ -0.22
VEGFA-222ENST00000520948 NPVFQ9HCQ7 196 aa13.69□□□□□ -0.22
VEGFA-222ENST00000520948 ZNF256Q9Y2P7 627 aaPredicted RBP13.69□□□□□ -0.22
VEGFA-222ENST00000520948 ZFP92A6NM28 416 aa13.68□□□□□ -0.22
VEGFA-222ENST00000520948 CST7O76096 145 aa13.68□□□□□ -0.22
VEGFA-222ENST00000520948 YIF1AO95070 293 aa13.68□□□□□ -0.22
VEGFA-222ENST00000520948 RD3LP0DJH9 198 aa13.68□□□□□ -0.22
VEGFA-222ENST00000520948 PSG1P11464 419 aa13.68□□□□□ -0.22
VEGFA-222ENST00000520948 ZNF90Q03938 601 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms