RNA–Protein interactions for RNA: ENST00000519895.5

MCF2-208, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,346 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-208ENST00000519895 MBPP02686 304 aaPredicted RBP2.17□□□□□ -2.06
MCF2-208ENST00000519895 PMP2P02689 132 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 IGKV1D-39P04432 117 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 GCSHP23434 173 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 HLA-DMAP28067 261 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 HOXA1P49639 335 aaPredicted RBP2.17□□□□□ -2.06
MCF2-208ENST00000519895 PIGPP57054 158 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 RAB25P57735 213 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 ATP5G2Q06055 141 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 BAXQ07812 192 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 ZNF616Q08AN1 781 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 ANKRD55Q3KP44 614 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 PYDC2Q56P42 97 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 TCTEX1D4Q5JR98 221 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 TMEM65Q6PI78 240 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 H2BFWTQ7Z2G1 175 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 CENPSQ8N2Z9 138 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 GVQW1Q8N7I0 195 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 ZNF431Q8TF32 576 aaPredicted RBP2.17□□□□□ -2.06
MCF2-208ENST00000519895 DPF1Q92782 380 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 RNF2Q99496 336 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 COMMD5Q9GZQ3 224 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 KCNK15Q9H427 330 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 PEF1Q9UBV8 284 aaKnown RBP2.17□□□□□ -2.06
MCF2-208ENST00000519895 TP53TG1Q9Y2A0 90 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 HILPDAQ9Y5L2 63 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 STAB2Q8WWQ8 2551 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 TRBV7-9A0A0J9YWB2 115 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 MDFIC2A0A1B0GVS7 189 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 C9orf170A2RU37 121 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 KRTAP29-1A8MX34 341 aaPredicted RBP2.17□□□□□ -2.06
MCF2-208ENST00000519895 PRSS46E5RG02 174 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 FCGR3BO75015 233 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 IFNA21P01568 189 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 TFF1P04155 84 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 PGAM2P15259 253 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 SELENOTP62341 195 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 SUPT4H1P63272 117 aaKnown RBP2.17□□□□□ -2.06
MCF2-208ENST00000519895 CTAG1AP78358 180 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 IDO2Q6ZQW0 420 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 HAPLN4Q86UW8 402 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 OR4A16Q8NH70 328 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 IL1F10Q8WWZ1 152 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 MRPL53Q96EL3 112 aaKnown RBP2.17□□□□□ -2.06
MCF2-208ENST00000519895 CLCC1Q96S66 551 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 NEU1Q99519 415 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 VSIRQ9H7M9 311 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 OR51B2Q9Y5P1 312 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 A0A087X0K7 114 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 IGHV3-43A0A0B4J1X8 118 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 A0A1W2PS18 150 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 PLA2G10O15496 165 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 CRYZL1O95825 349 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 IGKV1-5P01602 117 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 IGLV1-51P01701 117 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 TCRBP04435 133 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 PET100P0DJ07 73 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 IGHV3-43DP0DP04 118 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 RNASE2P10153 161 aaKnown RBP2.17□□□□□ -2.06
MCF2-208ENST00000519895 NFYAP23511 347 aaPredicted RBP2.17□□□□□ -2.06
MCF2-208ENST00000519895 OMGP23515 440 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 NPBWR1P48145 328 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 RAB11AP62491 216 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 DIAPH2-AS1Q14236 149 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 FAM106AQ4KMX7 169 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 GGNBP1Q5YKI7 109 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 UNQ5815/PRO19632Q6UWF5 114 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 TMEM14EPQ6UXP3 125 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 C5orf24Q7Z6I8 188 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 OR1N2Q8NGR9 330 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 OR1S1Q8NH92 325 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 SECTM1Q8WVN6 248 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 PHB2Q99623 299 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 HSPB9Q9BQS6 159 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 NEURL2Q9BR09 285 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 C6orf62Q9GZU0 229 aaPredicted RBP2.17□□□□□ -2.06
MCF2-208ENST00000519895 PARP12Q9H0J9 701 aaKnown RBP2.17□□□□□ -2.06
MCF2-208ENST00000519895 PLEKHA3Q9HB20 300 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 KLK11Q9UBX7 282 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 TP53TG3Q9ULZ0 132 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 RBM7Q9Y580 266 aaKnown RBP2.17□□□□□ -2.06
MCF2-208ENST00000519895 TIMM9Q9Y5J7 89 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 KIR2DL5BA0A0G2JN68 375 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 KIR2DL5BA0A0G2JPC4 375 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 IGHV3-64DA0A0J9YX35 117 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 WI2-2373I1.2A0A1W2PRP0 233 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 FBLL1A6NHQ2 334 aaKnown RBP2.16□□□□□ -2.06
MCF2-208ENST00000519895 CCL24O00175 119 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 HSPB6O14558 160 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 CLN5O75503 358 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 S1PR2O95136 353 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 AMBPP02760 352 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 IGKV1-16P04430 117 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 P2RY1P47900 373 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 BLCAPP62952 87 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 TNFRSF9Q07011 255 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 FGL1Q08830 312 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 LCN12Q6JVE5 192 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 LINC00322Q6ZN03 302 aaPredicted RBP2.16□□□□□ -2.06
MCF2-208ENST00000519895 ZNF600Q6ZNG1 722 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms