RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 CD74P04233 296 aa7.06□□□□□ -1.28
HDAC3-215ENST00000519474 IGHV4-30-4P0DP06 118 aa7.06□□□□□ -1.28
HDAC3-215ENST00000519474 CBLN1P23435 193 aa7.06□□□□□ -1.28
HDAC3-215ENST00000519474 FGF8P55075 233 aaPredicted RBP7.06□□□□□ -1.28
HDAC3-215ENST00000519474 ERVK-16P61578 105 aa7.06□□□□□ -1.28
HDAC3-215ENST00000519474 CD300EQ496F6 205 aaPredicted RBP7.06□□□□□ -1.28
HDAC3-215ENST00000519474 FAM106AQ4KMX7 169 aa7.06□□□□□ -1.28
HDAC3-215ENST00000519474 Q5BKY6 102 aa7.06□□□□□ -1.28
HDAC3-215ENST00000519474 Q8N402 240 aa7.06□□□□□ -1.28
HDAC3-215ENST00000519474 OR2K2Q8NGT1 345 aa7.06□□□□□ -1.28
HDAC3-215ENST00000519474 TERB2Q8NHR7 220 aa7.06□□□□□ -1.28
HDAC3-215ENST00000519474 DYNC2LI1Q8TCX1 351 aa7.06□□□□□ -1.28
HDAC3-215ENST00000519474 EEF1AKMT3Q96AZ1 226 aa7.06□□□□□ -1.28
HDAC3-215ENST00000519474 CXorf58Q96LI9 332 aa7.06□□□□□ -1.28
HDAC3-215ENST00000519474 TMEM14BQ9NUH8 114 aa7.06□□□□□ -1.28
HDAC3-215ENST00000519474 FKBP11Q9NYL4 201 aa7.06□□□□□ -1.28
HDAC3-215ENST00000519474 GABARAPH6UMI1 98 aa7.05□□□□□ -1.28
HDAC3-215ENST00000519474 UPK1BO75841 260 aa7.05□□□□□ -1.28
HDAC3-215ENST00000519474 IFNA21P01568 189 aa7.05□□□□□ -1.28
HDAC3-215ENST00000519474 C8orf88P0DMB2 117 aa7.05□□□□□ -1.28
HDAC3-215ENST00000519474 PI3P19957 117 aa7.05□□□□□ -1.28
HDAC3-215ENST00000519474 S100GP29377 79 aa7.05□□□□□ -1.28
HDAC3-215ENST00000519474 ETV6P41212 452 aa7.05□□□□□ -1.28
HDAC3-215ENST00000519474 RAB5BP61020 215 aa7.05□□□□□ -1.28
HDAC3-215ENST00000519474 RND3P61587 244 aa7.05□□□□□ -1.28
HDAC3-215ENST00000519474 LEMD1Q68G75 181 aa7.05□□□□□ -1.28
HDAC3-215ENST00000519474 HSD17B13Q7Z5P4 300 aaPredicted RBP7.05□□□□□ -1.28
HDAC3-215ENST00000519474 LAX1Q8IWV1 398 aa7.05□□□□□ -1.28
HDAC3-215ENST00000519474 VN1R17PQ8TDU5 208 aa7.05□□□□□ -1.28
HDAC3-215ENST00000519474 C15orf40Q8WUR7 153 aa7.05□□□□□ -1.28
HDAC3-215ENST00000519474 RNF125Q96EQ8 232 aa7.05□□□□□ -1.28
HDAC3-215ENST00000519474 SOSTQ9BQB4 213 aa7.05□□□□□ -1.28
HDAC3-215ENST00000519474 HINT2Q9BX68 163 aa7.05□□□□□ -1.28
HDAC3-215ENST00000519474 THYN1Q9P016 225 aa7.05□□□□□ -1.28
HDAC3-215ENST00000519474 PRNDQ9UKY0 176 aa7.05□□□□□ -1.28
HDAC3-215ENST00000519474 F11RQ9Y624 299 aaKnown RBP7.05□□□□□ -1.28
HDAC3-215ENST00000519474 SELENOKQ9Y6D0 94 aa7.05□□□□□ -1.28
HDAC3-215ENST00000519474 IGHV3-21A0A0B4J1V1 117 aa7.04□□□□□ -1.28
HDAC3-215ENST00000519474 TMEM213A2RRL7 107 aa7.04□□□□□ -1.28
HDAC3-215ENST00000519474 K7EQM0 130 aa7.04□□□□□ -1.28
HDAC3-215ENST00000519474 CD7P09564 240 aa7.04□□□□□ -1.28
HDAC3-215ENST00000519474 PGAM2P15259 253 aa7.04□□□□□ -1.28
HDAC3-215ENST00000519474 PIGPP57054 158 aa7.04□□□□□ -1.28
HDAC3-215ENST00000519474 HSPE1P61604 102 aaKnown RBP7.04□□□□□ -1.28
HDAC3-215ENST00000519474 RAB11AP62491 216 aa7.04□□□□□ -1.28
HDAC3-215ENST00000519474 IZUMO4Q1ZYL8 232 aa7.04□□□□□ -1.28
HDAC3-215ENST00000519474 SP6Q3SY56 376 aa7.04□□□□□ -1.28
HDAC3-215ENST00000519474 LCN12Q6JVE5 192 aa7.04□□□□□ -1.28
HDAC3-215ENST00000519474 STEAP1BQ6NZ63 245 aa7.04□□□□□ -1.28
HDAC3-215ENST00000519474 PLET1Q6UQ28 207 aa7.04□□□□□ -1.28
HDAC3-215ENST00000519474 TEX261Q6UWH6 196 aa7.04□□□□□ -1.28
HDAC3-215ENST00000519474 UNQ9165/PRO28630Q6UXU0 137 aa7.04□□□□□ -1.28
HDAC3-215ENST00000519474 LINC00322Q6ZN03 302 aaPredicted RBP7.04□□□□□ -1.28
HDAC3-215ENST00000519474 H2BFWTQ7Z2G1 175 aa7.04□□□□□ -1.28
HDAC3-215ENST00000519474 UXS1Q8NBZ7 420 aa7.04□□□□□ -1.28
HDAC3-215ENST00000519474 OR5B3Q8NH48 314 aa7.04□□□□□ -1.28
HDAC3-215ENST00000519474 SCARB1Q8WTV0 552 aa7.04□□□□□ -1.28
HDAC3-215ENST00000519474 SAT2Q96F10 170 aaPredicted RBP7.04□□□□□ -1.28
HDAC3-215ENST00000519474 DIRAS2Q96HU8 199 aa7.04□□□□□ -1.28
HDAC3-215ENST00000519474 HYLS1Q96M11 299 aa7.04□□□□□ -1.28
HDAC3-215ENST00000519474 TMEM56Q96MV1 263 aa7.04□□□□□ -1.28
HDAC3-215ENST00000519474 TP53RKQ96S44 253 aa7.04□□□□□ -1.28
HDAC3-215ENST00000519474 TM2D3Q9BRN9 247 aa7.04□□□□□ -1.28
HDAC3-215ENST00000519474 RTBDNQ9BSG5 229 aaPredicted RBP7.04□□□□□ -1.28
HDAC3-215ENST00000519474 TECRQ9NZ01 308 aaKnown RBP7.04□□□□□ -1.28
HDAC3-215ENST00000519474 U3KQ87 197 aa7.04□□□□□ -1.28
HDAC3-215ENST00000519474 IGHV3-35A0A0C4DH35 117 aa7.03□□□□□ -1.28
HDAC3-215ENST00000519474 C3orf85A0A1B0GTC6 90 aa7.03□□□□□ -1.28
HDAC3-215ENST00000519474 C15orf61A6NNL5 157 aa7.03□□□□□ -1.28
HDAC3-215ENST00000519474 F8W735 103 aaPredicted RBP7.03□□□□□ -1.28
HDAC3-215ENST00000519474 K7EIM0 57 aa7.03□□□□□ -1.28
HDAC3-215ENST00000519474 CTDSPLO15194 276 aa7.03□□□□□ -1.28
HDAC3-215ENST00000519474 IGKV1-5P01602 117 aa7.03□□□□□ -1.28
HDAC3-215ENST00000519474 P0C879 139 aa7.03□□□□□ -1.28
HDAC3-215ENST00000519474 TBPP20226 339 aa7.03□□□□□ -1.28
HDAC3-215ENST00000519474 GPR183P32249 361 aa7.03□□□□□ -1.28
HDAC3-215ENST00000519474 TNFSF8P32971 234 aa7.03□□□□□ -1.28
HDAC3-215ENST00000519474 ADMP35318 185 aa7.03□□□□□ -1.28
HDAC3-215ENST00000519474 TAS2R19P59542 299 aa7.03□□□□□ -1.28
HDAC3-215ENST00000519474 SSBP1Q04837 148 aaKnown RBP7.03□□□□□ -1.28
HDAC3-215ENST00000519474 LYG2Q86SG7 212 aa7.03□□□□□ -1.28
HDAC3-215ENST00000519474 SGPP2Q8IWX5 399 aa7.03□□□□□ -1.28
HDAC3-215ENST00000519474 STXBP6Q8NFX7 210 aa7.03□□□□□ -1.28
HDAC3-215ENST00000519474 OR4A16Q8NH70 328 aa7.03□□□□□ -1.28
HDAC3-215ENST00000519474 MARCH1Q8TCQ1 289 aa7.03□□□□□ -1.28
HDAC3-215ENST00000519474 LSM10Q969L4 123 aaKnown RBP7.03□□□□□ -1.28
HDAC3-215ENST00000519474 WDR89Q96FK6 387 aaPredicted RBP7.03□□□□□ -1.28
HDAC3-215ENST00000519474 ZNF414Q96IQ9 312 aa7.03□□□□□ -1.28
HDAC3-215ENST00000519474 RCHY1Q96PM5 261 aa7.03□□□□□ -1.28
HDAC3-215ENST00000519474 CHRDL1Q9BU40 450 aa7.03□□□□□ -1.28
HDAC3-215ENST00000519474 NDUFAF3Q9BU61 184 aa7.03□□□□□ -1.28
HDAC3-215ENST00000519474 ZNF436Q9C0F3 470 aaPredicted RBP7.03□□□□□ -1.28
HDAC3-215ENST00000519474 SLIRPQ9GZT3 109 aaKnown RBP7.03□□□□□ -1.28
HDAC3-215ENST00000519474 GPR132Q9UNW8 380 aa7.03□□□□□ -1.28
HDAC3-215ENST00000519474 TMEM56-RWDD3S4R434 201 aa7.03□□□□□ -1.28
HDAC3-215ENST00000519474 FAM240BA0A1B0GVZ2 78 aa7.02□□□□□ -1.29
HDAC3-215ENST00000519474 RPS10-NUDT3A0A1W2PQS6 291 aa7.02□□□□□ -1.29
HDAC3-215ENST00000519474 OR2T8A6NH00 312 aa7.02□□□□□ -1.29
HDAC3-215ENST00000519474 A8MWP6 167 aa7.02□□□□□ -1.29
HDAC3-215ENST00000519474 TGOLN2O43493 480 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms