RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 IGLC6P0CF74 106 aa2.6□□□□□ -1.99
RNU4-60P-201ENST00000517239 MPV17P39210 176 aa2.6□□□□□ -1.99
RNU4-60P-201ENST00000517239 AKR1D1P51857 326 aa2.6□□□□□ -1.99
RNU4-60P-201ENST00000517239 FXYD7P58549 80 aa2.6□□□□□ -1.99
RNU4-60P-201ENST00000517239 AKR1C1Q04828 323 aa2.6□□□□□ -1.99
RNU4-60P-201ENST00000517239 AMMECR1LQ6DCA0 310 aa2.6□□□□□ -1.99
RNU4-60P-201ENST00000517239 MIR17HGQ75NE6 70 aa2.6□□□□□ -1.99
RNU4-60P-201ENST00000517239 KRTAP7-1Q8IUC3 87 aa2.6□□□□□ -1.99
RNU4-60P-201ENST00000517239 MSRB3Q8IXL7 192 aa2.6□□□□□ -1.99
RNU4-60P-201ENST00000517239 TMEM105Q8N8V8 129 aa2.6□□□□□ -1.99
RNU4-60P-201ENST00000517239 OR4S1Q8NGB4 309 aa2.6□□□□□ -1.99
RNU4-60P-201ENST00000517239 ZNF418Q8TF45 676 aaPredicted RBP2.6□□□□□ -1.99
RNU4-60P-201ENST00000517239 YPEL2Q96QA6 119 aa2.6□□□□□ -1.99
RNU4-60P-201ENST00000517239 HIST1H2BLQ99880 126 aa2.6□□□□□ -1.99
RNU4-60P-201ENST00000517239 GINS4Q9BRT9 223 aa2.6□□□□□ -1.99
RNU4-60P-201ENST00000517239 TAF9BQ9HBM6 251 aa2.6□□□□□ -1.99
RNU4-60P-201ENST00000517239 TNFRSF19Q9NS68 423 aa2.6□□□□□ -1.99
RNU4-60P-201ENST00000517239 MARCOQ9UEW3 520 aaPredicted RBP2.6□□□□□ -1.99
RNU4-60P-201ENST00000517239 NUP214P35658 2090 aaPredicted RBP2.6□□□□□ -1.99
RNU4-60P-201ENST00000517239 SBF1O95248 1867 aa2.6□□□□□ -1.99
RNU4-60P-201ENST00000517239 SPATA31E1Q6ZUB1 1445 aa2.59□□□□□ -1.99
RNU4-60P-201ENST00000517239 ERBINQ96RT1 1412 aa2.59□□□□□ -1.99
RNU4-60P-201ENST00000517239 WDR90Q96KV7 1748 aa2.59□□□□□ -1.99
RNU4-60P-201ENST00000517239 TRPM3Q9HCF6 1732 aaPredicted RBP2.59□□□□□ -1.99
RNU4-60P-201ENST00000517239 GRIN2AQ12879 1464 aa2.59□□□□□ -1.99
RNU4-60P-201ENST00000517239 TCOF1Q13428 1488 aaKnown RBP2.59□□□□□ -1.99
RNU4-60P-201ENST00000517239 DOCK8Q8NF50 2099 aa2.59□□□□□ -1.99
RNU4-60P-201ENST00000517239 ARHGEF11O15085 1522 aa2.59□□□□□ -1.99
RNU4-60P-201ENST00000517239 TRAV13-1A0A0B4J241 112 aa2.59□□□□□ -1.99
RNU4-60P-201ENST00000517239 GRIFINA4D1Z8 144 aa2.59□□□□□ -1.99
RNU4-60P-201ENST00000517239 KRTAP29-1A8MX34 341 aaPredicted RBP2.59□□□□□ -1.99
RNU4-60P-201ENST00000517239 SOD1P00441 154 aa2.59□□□□□ -1.99
RNU4-60P-201ENST00000517239 IGKV1-16P04430 117 aa2.59□□□□□ -1.99
RNU4-60P-201ENST00000517239 IFNA4P05014 189 aa2.59□□□□□ -1.99
RNU4-60P-201ENST00000517239 RNASE4P34096 147 aaKnown RBP2.59□□□□□ -1.99
RNU4-60P-201ENST00000517239 RPL35P42766 123 aaKnown RBP2.59□□□□□ -1.99
RNU4-60P-201ENST00000517239 EIF2B2P49770 351 aaKnown RBP2.59□□□□□ -1.99
RNU4-60P-201ENST00000517239 HBBP68871 147 aa2.59□□□□□ -1.99
RNU4-60P-201ENST00000517239 KISS1Q15726 138 aa2.59□□□□□ -1.99
RNU4-60P-201ENST00000517239 ZNF141Q15928 474 aa2.59□□□□□ -1.99
RNU4-60P-201ENST00000517239 HSD17B12Q53GQ0 312 aa2.59□□□□□ -1.99
RNU4-60P-201ENST00000517239 LDLRAD2Q5SZI1 272 aa2.59□□□□□ -1.99
RNU4-60P-201ENST00000517239 XP32Q5T750 250 aa2.59□□□□□ -1.99
RNU4-60P-201ENST00000517239 GFI1BQ5VTD9 330 aa2.59□□□□□ -1.99
RNU4-60P-201ENST00000517239 GLIPR1L1Q6UWM5 242 aa2.59□□□□□ -1.99
RNU4-60P-201ENST00000517239 Q6ZR03 302 aa2.59□□□□□ -1.99
RNU4-60P-201ENST00000517239 MMGT1Q8N4V1 131 aa2.59□□□□□ -1.99
RNU4-60P-201ENST00000517239 MAGOHBQ96A72 148 aaKnown RBP2.59□□□□□ -1.99
RNU4-60P-201ENST00000517239 SCGB3A1Q96QR1 104 aa2.59□□□□□ -1.99
RNU4-60P-201ENST00000517239 NAA38Q9BRA0 125 aaKnown RBP2.59□□□□□ -1.99
RNU4-60P-201ENST00000517239 MIEN1Q9BRT3 115 aa2.59□□□□□ -1.99
RNU4-60P-201ENST00000517239 EPDR1Q9UM22 224 aa2.59□□□□□ -1.99
RNU4-60P-201ENST00000517239 ARHGAP21Q5T5U3 1957 aa2.59□□□□□ -2
RNU4-60P-201ENST00000517239 VPS8Q8N3P4 1428 aa2.59□□□□□ -2
RNU4-60P-201ENST00000517239 COL27A1Q8IZC6 1860 aaPredicted RBP2.58□□□□□ -2
RNU4-60P-201ENST00000517239 IGKV1D-37A0A075B6S9 117 aa2.58□□□□□ -2
RNU4-60P-201ENST00000517239 IGKV3D-20A0A0C4DH25 116 aa2.58□□□□□ -2
RNU4-60P-201ENST00000517239 MDFIC2A0A1B0GVS7 189 aa2.58□□□□□ -2
RNU4-60P-201ENST00000517239 C17orf51A8MQB3 221 aa2.58□□□□□ -2
RNU4-60P-201ENST00000517239 A8MUU9 505 aa2.58□□□□□ -2
RNU4-60P-201ENST00000517239 GGTLC3B5MD39 225 aa2.58□□□□□ -2
RNU4-60P-201ENST00000517239 ZNF670-ZNF695F2Z2N8 137 aa2.58□□□□□ -2
RNU4-60P-201ENST00000517239 UBFD1O14562 309 aaKnown RBP2.58□□□□□ -2
RNU4-60P-201ENST00000517239 NPFFO15130 113 aa2.58□□□□□ -2
RNU4-60P-201ENST00000517239 NDUFB3O43676 98 aa2.58□□□□□ -2
RNU4-60P-201ENST00000517239 ZNF861PO60384 105 aa2.58□□□□□ -2
RNU4-60P-201ENST00000517239 HIST1H2BKO60814 126 aa2.58□□□□□ -2
RNU4-60P-201ENST00000517239 NPYP01303 97 aa2.58□□□□□ -2
RNU4-60P-201ENST00000517239 HIST1H2BJP06899 126 aa2.58□□□□□ -2
RNU4-60P-201ENST00000517239 RPL22P35268 128 aaKnown RBP2.58□□□□□ -2
RNU4-60P-201ENST00000517239 FUT5Q11128 374 aa2.58□□□□□ -2
RNU4-60P-201ENST00000517239 C2orf91Q6ZV80 131 aa2.58□□□□□ -2
RNU4-60P-201ENST00000517239 LYZL2Q7Z4W2 148 aa2.58□□□□□ -2
RNU4-60P-201ENST00000517239 C3orf22Q8N5N4 141 aa2.58□□□□□ -2
RNU4-60P-201ENST00000517239 SIGLECL1Q8N7X8 197 aa2.58□□□□□ -2
RNU4-60P-201ENST00000517239 SPANXA2-OT1Q8N9U9 137 aa2.58□□□□□ -2
RNU4-60P-201ENST00000517239 CLDND2Q8NHS1 167 aa2.58□□□□□ -2
RNU4-60P-201ENST00000517239 ELSPBP1Q96BH3 223 aa2.58□□□□□ -2
RNU4-60P-201ENST00000517239 PPP3R2Q96LZ3 170 aa2.58□□□□□ -2
RNU4-60P-201ENST00000517239 NPCDR1Q9BY65 106 aa2.58□□□□□ -2
RNU4-60P-201ENST00000517239 KRTAP9-4Q9BYQ2 154 aa2.58□□□□□ -2
RNU4-60P-201ENST00000517239 SOX21Q9Y651 276 aaPredicted RBP2.58□□□□□ -2
RNU4-60P-201ENST00000517239 COL18A1P39060 1754 aa2.58□□□□□ -2
RNU4-60P-201ENST00000517239 PTPRSQ13332 1948 aa2.58□□□□□ -2
RNU4-60P-201ENST00000517239 MBD5Q9P267 1494 aa2.58□□□□□ -2
RNU4-60P-201ENST00000517239 RB1CC1Q8TDY2 1594 aa2.57□□□□□ -2
RNU4-60P-201ENST00000517239 NYNRINQ9P2P1 1898 aaKnown RBP2.57□□□□□ -2
RNU4-60P-201ENST00000517239 TRGV10A0A0A0MS01 117 aa2.57□□□□□ -2
RNU4-60P-201ENST00000517239 IGHV3-73A0A0B4J1V6 119 aa2.57□□□□□ -2
RNU4-60P-201ENST00000517239 H3BMG7 143 aa2.57□□□□□ -2
RNU4-60P-201ENST00000517239 H3BQ85 93 aa2.57□□□□□ -2
RNU4-60P-201ENST00000517239 H3BT86 120 aa2.57□□□□□ -2
RNU4-60P-201ENST00000517239 CORTO00230 105 aa2.57□□□□□ -2
RNU4-60P-201ENST00000517239 MT-ND6P03923 174 aa2.57□□□□□ -2
RNU4-60P-201ENST00000517239 CCL5P13501 91 aa2.57□□□□□ -2
RNU4-60P-201ENST00000517239 CRYGSP22914 178 aa2.57□□□□□ -2
RNU4-60P-201ENST00000517239 GUCA1AP43080 201 aaPredicted RBP2.57□□□□□ -2
RNU4-60P-201ENST00000517239 VEGFCP49767 419 aa2.57□□□□□ -2
RNU4-60P-201ENST00000517239 GNG2P59768 71 aa2.57□□□□□ -2
RNU4-60P-201ENST00000517239 MIAQ16674 131 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms