RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 Q5BKY6 102 aa-0.68□□□□□ -2.52
RNU6-1088P-201ENST00000516850 BRMS1LQ5PSV4 323 aa-0.68□□□□□ -2.52
RNU6-1088P-201ENST00000516850 C1orf195Q5TG92 126 aa-0.68□□□□□ -2.52
RNU6-1088P-201ENST00000516850 C2orf82Q6UX34 121 aa-0.68□□□□□ -2.52
RNU6-1088P-201ENST00000516850 TRAPPC6BQ86SZ2 158 aa-0.68□□□□□ -2.52
RNU6-1088P-201ENST00000516850 SYCE1Q8N0S2 351 aa-0.68□□□□□ -2.52
RNU6-1088P-201ENST00000516850 OR52A5Q9H2C5 316 aa-0.68□□□□□ -2.52
RNU6-1088P-201ENST00000516850 MAP1LC3AQ9H492 121 aa-0.68□□□□□ -2.52
RNU6-1088P-201ENST00000516850 OSTCQ9NRP0 149 aa-0.68□□□□□ -2.52
RNU6-1088P-201ENST00000516850 RNF11Q9Y3C5 154 aa-0.68□□□□□ -2.52
RNU6-1088P-201ENST00000516850 UNC13CQ8NB66 2214 aa-0.69□□□□□ -2.52
RNU6-1088P-201ENST00000516850 F5H768 121 aa-0.69□□□□□ -2.52
RNU6-1088P-201ENST00000516850 H3BRM9 83 aa-0.69□□□□□ -2.52
RNU6-1088P-201ENST00000516850 PFDN6O15212 129 aa-0.69□□□□□ -2.52
RNU6-1088P-201ENST00000516850 DHFRP00374 187 aa-0.69□□□□□ -2.52
RNU6-1088P-201ENST00000516850 TYMSP04818 313 aa-0.69□□□□□ -2.52
RNU6-1088P-201ENST00000516850 TPM1P09493 284 aa-0.69□□□□□ -2.52
RNU6-1088P-201ENST00000516850 RPL12P30050 165 aaKnown RBP-0.69□□□□□ -2.52
RNU6-1088P-201ENST00000516850 FUNDC1Q8IVP5 155 aa-0.69□□□□□ -2.52
RNU6-1088P-201ENST00000516850 TP53RKQ96S44 253 aa-0.69□□□□□ -2.52
RNU6-1088P-201ENST00000516850 TMEM138Q9NPI0 162 aa-0.69□□□□□ -2.52
RNU6-1088P-201ENST00000516850 TP73-AS1Q9UF72 201 aa-0.69□□□□□ -2.52
RNU6-1088P-201ENST00000516850 CHCHD2Q9Y6H1 151 aaPredicted RBP-0.69□□□□□ -2.52
RNU6-1088P-201ENST00000516850 PLXND1Q9Y4D7 1925 aa-0.7□□□□□ -2.52
RNU6-1088P-201ENST00000516850 UBR5O95071 2799 aaPredicted RBP-0.7□□□□□ -2.52
RNU6-1088P-201ENST00000516850 C7orf71A4D174 169 aa-0.7□□□□□ -2.52
RNU6-1088P-201ENST00000516850 DPRXA6NFQ7 191 aa-0.7□□□□□ -2.52
RNU6-1088P-201ENST00000516850 S100A4P26447 101 aaKnown RBP-0.7□□□□□ -2.52
RNU6-1088P-201ENST00000516850 SPATA45Q537H7 98 aa-0.7□□□□□ -2.52
RNU6-1088P-201ENST00000516850 TEN1Q86WV5 123 aa-0.7□□□□□ -2.52
RNU6-1088P-201ENST00000516850 H1FXQ92522 213 aaKnown RBP-0.7□□□□□ -2.52
RNU6-1088P-201ENST00000516850 C3orf18Q9UK00 162 aa-0.7□□□□□ -2.52
RNU6-1088P-201ENST00000516850 CECR2Q9BXF3 1484 aa-0.71□□□□□ -2.52
RNU6-1088P-201ENST00000516850 TRAV9-1A0A075B6T8 112 aa-0.71□□□□□ -2.52
RNU6-1088P-201ENST00000516850 ANP32AP39687 249 aaKnown RBP-0.71□□□□□ -2.52
RNU6-1088P-201ENST00000516850 CDC42P60953 191 aa-0.71□□□□□ -2.52
RNU6-1088P-201ENST00000516850 TOMM6Q96B49 74 aa-0.71□□□□□ -2.52
RNU6-1088P-201ENST00000516850 GPER1Q99527 375 aa-0.71□□□□□ -2.52
RNU6-1088P-201ENST00000516850 WFDC10AQ9H1F0 79 aa-0.71□□□□□ -2.52
RNU6-1088P-201ENST00000516850 TREM1Q9NP99 234 aa-0.71□□□□□ -2.52
RNU6-1088P-201ENST00000516850 FBXL12Q9NXK8 326 aa-0.71□□□□□ -2.52
RNU6-1088P-201ENST00000516850 HMCN2Q8NDA2 5059 aa-0.71□□□□□ -2.52
RNU6-1088P-201ENST00000516850 KNTC1P50748 2209 aa-0.72□□□□□ -2.52
RNU6-1088P-201ENST00000516850 TRPC5OSA6NMA1 111 aa-0.72□□□□□ -2.52
RNU6-1088P-201ENST00000516850 F8W1H4 67 aa-0.72□□□□□ -2.52
RNU6-1088P-201ENST00000516850 BUB1B-PAK6H3BSN5 160 aa-0.72□□□□□ -2.52
RNU6-1088P-201ENST00000516850 OCMP0CE72 109 aaPredicted RBP-0.72□□□□□ -2.52
RNU6-1088P-201ENST00000516850 CLVS2Q5SYC1 327 aa-0.72□□□□□ -2.52
RNU6-1088P-201ENST00000516850 PRR15Q8IV56 129 aa-0.72□□□□□ -2.52
RNU6-1088P-201ENST00000516850 OR2T35Q8NGX2 323 aa-0.72□□□□□ -2.52
RNU6-1088P-201ENST00000516850 OR2T10Q8NGZ9 312 aa-0.72□□□□□ -2.52
RNU6-1088P-201ENST00000516850 DNAJB3Q8WWF6 145 aa-0.72□□□□□ -2.52
RNU6-1088P-201ENST00000516850 KLK6Q92876 244 aa-0.72□□□□□ -2.52
RNU6-1088P-201ENST00000516850 C19orf60Q96EN9 201 aa-0.72□□□□□ -2.52
RNU6-1088P-201ENST00000516850 C11orf68Q9H3H3 251 aaKnown RBP-0.72□□□□□ -2.52
RNU6-1088P-201ENST00000516850 PRTFDC1Q9NRG1 225 aa-0.72□□□□□ -2.52
RNU6-1088P-201ENST00000516850 FLNCQ14315 2725 aa-0.73□□□□□ -2.53
RNU6-1088P-201ENST00000516850 YKT6O15498 198 aa-0.73□□□□□ -2.53
RNU6-1088P-201ENST00000516850 OR4E1P0C645 316 aa-0.73□□□□□ -2.53
RNU6-1088P-201ENST00000516850 CASP1P29466 404 aa-0.73□□□□□ -2.53
RNU6-1088P-201ENST00000516850 NAA20P61599 178 aa-0.73□□□□□ -2.53
RNU6-1088P-201ENST00000516850 GLIPR1L1Q6UWM5 242 aa-0.73□□□□□ -2.53
RNU6-1088P-201ENST00000516850 ZNF431Q8TF32 576 aaPredicted RBP-0.73□□□□□ -2.53
RNU6-1088P-201ENST00000516850 LYSMD1Q96S90 227 aa-0.73□□□□□ -2.53
RNU6-1088P-201ENST00000516850 MGAMO43451 1857 aa-0.73□□□□□ -2.53
RNU6-1088P-201ENST00000516850 KDM6BO15054 1643 aa-0.74□□□□□ -2.53
RNU6-1088P-201ENST00000516850 APOEP02649 317 aa-0.74□□□□□ -2.53
RNU6-1088P-201ENST00000516850 CD2P06729 351 aa-0.74□□□□□ -2.53
RNU6-1088P-201ENST00000516850 YPEL3P61236 119 aaPredicted RBP-0.74□□□□□ -2.53
RNU6-1088P-201ENST00000516850 GDPD1Q8N9F7 314 aa-0.74□□□□□ -2.53
RNU6-1088P-201ENST00000516850 OR8D4Q8NGM9 314 aa-0.74□□□□□ -2.53
RNU6-1088P-201ENST00000516850 CANT1Q8WVQ1 401 aa-0.74□□□□□ -2.53
RNU6-1088P-201ENST00000516850 PLAC4Q8WY50 150 aa-0.74□□□□□ -2.53
RNU6-1088P-201ENST00000516850 NIPSNAP1Q9BPW8 284 aa-0.74□□□□□ -2.53
RNU6-1088P-201ENST00000516850 BCL2L10Q9HD36 194 aa-0.74□□□□□ -2.53
RNU6-1088P-201ENST00000516850 UTP11Q9Y3A2 253 aaKnown RBP-0.74□□□□□ -2.53
RNU6-1088P-201ENST00000516850 ANK2Q01484 3957 aa-0.74□□□□□ -2.53
RNU6-1088P-201ENST00000516850 RAD50Q92878 1312 aa-0.74□□□□□ -2.53
RNU6-1088P-201ENST00000516850 ABCC11Q96J66 1382 aa-0.74□□□□□ -2.53
RNU6-1088P-201ENST00000516850 FREM3P0C091 2139 aa-0.74□□□□□ -2.53
RNU6-1088P-201ENST00000516850 MED1Q15648 1581 aaPredicted RBP-0.74□□□□□ -2.53
RNU6-1088P-201ENST00000516850 TRAV23DV6A0A075B6W5 121 aa-0.75□□□□□ -2.53
RNU6-1088P-201ENST00000516850 EXOC1LA0A1B0GW35 172 aa-0.75□□□□□ -2.53
RNU6-1088P-201ENST00000516850 ZNF727A8MUV8 499 aa-0.75□□□□□ -2.53
RNU6-1088P-201ENST00000516850 EVPLLA8MZ36 301 aa-0.75□□□□□ -2.53
RNU6-1088P-201ENST00000516850 HLA-DRB1P01911 266 aa-0.75□□□□□ -2.53
RNU6-1088P-201ENST00000516850 PMAIP1Q13794 54 aa-0.75□□□□□ -2.53
RNU6-1088P-201ENST00000516850 TSNQ15631 228 aaKnown RBP-0.75□□□□□ -2.53
RNU6-1088P-201ENST00000516850 AADACL4Q5VUY2 407 aa-0.75□□□□□ -2.53
RNU6-1088P-201ENST00000516850 Q6ZQY7 126 aa-0.75□□□□□ -2.53
RNU6-1088P-201ENST00000516850 ZNF833PQ6ZTB9 187 aa-0.75□□□□□ -2.53
RNU6-1088P-201ENST00000516850 LYG2Q86SG7 212 aa-0.75□□□□□ -2.53
RNU6-1088P-201ENST00000516850 Q86TA4 180 aa-0.75□□□□□ -2.53
RNU6-1088P-201ENST00000516850 PIGXQ8TBF5 258 aa-0.75□□□□□ -2.53
RNU6-1088P-201ENST00000516850 CHMP4BQ9H444 224 aaKnown RBP-0.75□□□□□ -2.53
RNU6-1088P-201ENST00000516850 BCL9O00512 1426 aa-0.75□□□□□ -2.53
RNU6-1088P-201ENST00000516850 ABCA12Q86UK0 2595 aa-0.75□□□□□ -2.53
RNU6-1088P-201ENST00000516850 NSD1Q96L73 2696 aaPredicted RBP-0.76□□□□□ -2.53
RNU6-1088P-201ENST00000516850 A0A087X0T9 212 aa-0.76□□□□□ -2.53
RNU6-1088P-201ENST00000516850 JMJD7-PLA2G4BH0Y9G9 81 aa-0.76□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 560.1 ms