RNA–Protein interactions for RNA: ENST00000516428.1

RNU4-54P-201, Transcript of RNA, U4 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU4-54P, Length 129 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-54P-201ENST00000516428 BAZ1BQ9UIG0 1483 aaKnown RBP0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 RAPGEF2Q9Y4G8 1499 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 GLI3P10071 1580 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 MED1Q15648 1581 aaPredicted RBP0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 NRKQ7Z2Y5 1582 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 CUL7Q14999 1698 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 TP53BP1Q12888 1972 aaPredicted RBP0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 MUC19Q7Z5P9 8384 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 DSPPQ9NZW4 1301 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 RIC1Q4ADV7 1423 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 TNS2Q63HR2 1409 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 YEATS2Q9ULM3 1422 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 ZFYVE16Q7Z3T8 1539 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 DLC1Q96QB1 1528 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 LTBP4Q8N2S1 1624 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 LTBP1Q14766 1721 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 KIF13BQ9NQT8 1826 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 MYH3P11055 1940 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 MIA3Q5JRA6 1907 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 PLXNB3Q9ULL4 1909 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 TRIOBPQ9H2D6 2365 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 FER1L5A0AVI2 2057 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 CACNA1SQ13698 1873 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 NLRC5Q86WI3 1866 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 ANKRD31Q8N7Z5 1873 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 DOCK5Q9H7D0 1870 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 ADGRB1O14514 1584 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 A2ML1A8K2U0 1454 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 ADGRL2O95490 1459 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 PZPP20742 1482 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 SCAF11Q99590 1463 aaKnown RBP0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 CEP164Q9UPV0 1460 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 IBTKQ9P2D0 1353 aaPredicted RBP0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 IGLV4-69A0A075B6H9 119 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 A0A096LNJ9 63 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 TRBV6-6A0A0A6YYG2 114 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 TRAV13-1A0A0B4J241 112 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 IGKV1-9A0A0C4DH69 117 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 A0A0D9SEW6 157 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 TRBV27A0A0K0K1C4 114 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 PNMA8CA0A1B0GUJ8 204 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 A0A1B0GW64 132 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 A0A1W2PQD3 144 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 ODAMA1E959 279 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 C7orf71A4D174 169 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 A6NED7 52 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 TMEM235A6NFC5 223 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 OR2T8A6NH00 312 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 ZNF860A6NHJ4 632 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 IFITM5A6NNB3 132 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 C17orf51A8MQB3 221 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 A8MWP4 228 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 A8MWV9 139 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 C1orf196B1AJZ1 125 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 C11orf94C9JXX5 98 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 ZNF670-ZNF695F2Z2N8 137 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 H3BMM0 161 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 C3orf84H3BNL1 204 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 H3BQ85 93 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 BUB1B-PAK6H3BSN5 160 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 TMEM256-PLSCR3K7ERE1 68 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 M0R378 163 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 CORTO00230 105 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 SDCBPO00560 298 aaPredicted RBP0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 CDC42EP2O14613 210 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 PHOX2AO14813 284 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 UQCRQO14949 82 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 LECT2O14960 151 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 NPFFO15130 113 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 LEPROTO15243 131 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 OR2T1O43869 369 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 CREBL2O60519 120 aaPredicted RBP0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 YPEL1O60688 119 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 SH2D1AO60880 128 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 PGLYRP1O75594 196 aaPredicted RBP0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 LY6HO94772 140 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 TCL1BO95988 128 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 NAPSAO96009 420 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 HRASP01112 189 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 KRASP01116 189 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 LHBP01229 141 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 TNFP01375 233 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 RBP4P02753 201 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 IL4P05112 153 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 CISD3P0C7P0 127 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 IGLC6P0CF74 106 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 ZNF728P0DKX0 622 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 INAFM2P0DMQ5 153 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 LINC00694P0DN24 101 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 CGB3P0DN86 165 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 CGB7P0DN87 165 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 CCL3P10147 92 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 CD28P10747 220 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 COX6A1P12074 109 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 FABP2P12104 132 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 HLA-EP13747 358 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 HIST1H1BP16401 226 aaKnown RBP0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 HIST1H1DP16402 221 aaKnown RBP0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 NTF3P20783 257 aa0.38□□□□□ -2.35
RNU4-54P-201ENST00000516428 CSRP1P21291 193 aaKnown RBP0.38□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms