RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 FOXA2Q9Y261 457 aaPredicted RBP2.98□□□□□ -1.93
CAST-242ENST00000515063 CACNA1DQ01668 2161 aa2.98□□□□□ -1.93
CAST-242ENST00000515063 A0A087WW49 117 aa2.97□□□□□ -1.93
CAST-242ENST00000515063 TRGV10A0A0A0MS01 117 aa2.97□□□□□ -1.93
CAST-242ENST00000515063 TGIF2-C20orf24A0A0A6YYL0 155 aa2.97□□□□□ -1.93
CAST-242ENST00000515063 IGHV3-43A0A0B4J1X8 118 aa2.97□□□□□ -1.93
CAST-242ENST00000515063 A0A1W2PPV4 95 aa2.97□□□□□ -1.93
CAST-242ENST00000515063 hADV38S2A0JD32 116 aa2.97□□□□□ -1.93
CAST-242ENST00000515063 PCP4L1A6NKN8 68 aa2.97□□□□□ -1.93
CAST-242ENST00000515063 C9JCJ5 164 aa2.97□□□□□ -1.93
CAST-242ENST00000515063 PPP5D1E7EU14 171 aa2.97□□□□□ -1.93
CAST-242ENST00000515063 H7BYZ3 331 aa2.97□□□□□ -1.93
CAST-242ENST00000515063 M0R1X1 148 aa2.97□□□□□ -1.93
CAST-242ENST00000515063 FCGR3BO75015 233 aa2.97□□□□□ -1.93
CAST-242ENST00000515063 CDK2AP2O75956 126 aa2.97□□□□□ -1.93
CAST-242ENST00000515063 IFNA10P01566 189 aa2.97□□□□□ -1.93
CAST-242ENST00000515063 TRGC2P03986 189 aa2.97□□□□□ -1.93
CAST-242ENST00000515063 CSN3P07498 182 aa2.97□□□□□ -1.93
CAST-242ENST00000515063 FBP1P09467 338 aa2.97□□□□□ -1.93
CAST-242ENST00000515063 TRGC1P0CF51 173 aa2.97□□□□□ -1.93
CAST-242ENST00000515063 IGHV3-43DP0DP04 118 aa2.97□□□□□ -1.93
CAST-242ENST00000515063 GPX4P36969 197 aaPredicted RBP2.97□□□□□ -1.93
CAST-242ENST00000515063 CEBPDP49716 269 aaPredicted RBP2.97□□□□□ -1.93
CAST-242ENST00000515063 CEBPGP53567 150 aa2.97□□□□□ -1.93
CAST-242ENST00000515063 FGF8P55075 233 aaPredicted RBP2.97□□□□□ -1.93
CAST-242ENST00000515063 NDUFA6P56556 154 aa2.97□□□□□ -1.93
CAST-242ENST00000515063 RHOBP62745 196 aa2.97□□□□□ -1.93
CAST-242ENST00000515063 MRPS11P82912 194 aaKnown RBP2.97□□□□□ -1.93
CAST-242ENST00000515063 ADIRFQ15847 76 aa2.97□□□□□ -1.93
CAST-242ENST00000515063 C17orf58Q2M2W7 97 aa2.97□□□□□ -1.93
CAST-242ENST00000515063 DEFB109BQ30KR1 87 aa2.97□□□□□ -1.93
CAST-242ENST00000515063 COX19Q49B96 90 aa2.97□□□□□ -1.93
CAST-242ENST00000515063 C2orf83Q53S99 150 aa2.97□□□□□ -1.93
CAST-242ENST00000515063 STUMQ69YW2 141 aa2.97□□□□□ -1.93
CAST-242ENST00000515063 OR4A47Q6IF82 309 aa2.97□□□□□ -1.93
CAST-242ENST00000515063 ZNF343Q6P1L6 599 aa2.97□□□□□ -1.93
CAST-242ENST00000515063 KCNIP4Q6PIL6 250 aa2.97□□□□□ -1.93
CAST-242ENST00000515063 SPNS3Q6ZMD2 512 aa2.97□□□□□ -1.93
CAST-242ENST00000515063 SLC25A48Q6ZT89 311 aaKnown RBP2.97□□□□□ -1.93
CAST-242ENST00000515063 TMEM144Q7Z5S9 345 aa2.97□□□□□ -1.93
CAST-242ENST00000515063 VASH2Q86V25 355 aa2.97□□□□□ -1.93
CAST-242ENST00000515063 MMD2Q8IY49 270 aa2.97□□□□□ -1.93
CAST-242ENST00000515063 HIST3H2BBQ8N257 126 aa2.97□□□□□ -1.93
CAST-242ENST00000515063 LINC00311Q8N616 119 aa2.97□□□□□ -1.93
CAST-242ENST00000515063 NHLRC2Q8NBF2 726 aa2.97□□□□□ -1.93
CAST-242ENST00000515063 OR2Z1Q8NG97 314 aa2.97□□□□□ -1.93
CAST-242ENST00000515063 OR4F5Q8NH21 305 aa2.97□□□□□ -1.93
CAST-242ENST00000515063 OR4A5Q8NH83 315 aa2.97□□□□□ -1.93
CAST-242ENST00000515063 UBALD1Q8TB05 177 aa2.97□□□□□ -1.93
CAST-242ENST00000515063 FAM57AQ8TBR7 257 aa2.97□□□□□ -1.93
CAST-242ENST00000515063 ZNF596Q8TC21 504 aa2.97□□□□□ -1.93
CAST-242ENST00000515063 RNASEH2CQ8TDP1 164 aaKnown RBP2.97□□□□□ -1.93
CAST-242ENST00000515063 ITLN1Q8WWA0 313 aa2.97□□□□□ -1.93
CAST-242ENST00000515063 C11orf52Q96A22 123 aa2.97□□□□□ -1.93
CAST-242ENST00000515063 RPUSD4Q96CM3 377 aaKnown RBP2.97□□□□□ -1.93
CAST-242ENST00000515063 SLC35E1Q96K37 410 aa2.97□□□□□ -1.93
CAST-242ENST00000515063 OR2V2Q96R30 315 aa2.97□□□□□ -1.93
CAST-242ENST00000515063 OR4F4Q96R69 305 aa2.97□□□□□ -1.93
CAST-242ENST00000515063 GGTLC1Q9BX51 225 aa2.97□□□□□ -1.93
CAST-242ENST00000515063 OPN3Q9H1Y3 402 aaPredicted RBP2.97□□□□□ -1.93
CAST-242ENST00000515063 ENY2Q9NPA8 101 aa2.97□□□□□ -1.93
CAST-242ENST00000515063 TMEM14BQ9NUH8 114 aa2.97□□□□□ -1.93
CAST-242ENST00000515063 UFSP2Q9NUQ7 469 aa2.97□□□□□ -1.93
CAST-242ENST00000515063 BET1LQ9NYM9 111 aa2.97□□□□□ -1.93
CAST-242ENST00000515063 GNG12Q9UBI6 72 aa2.97□□□□□ -1.93
CAST-242ENST00000515063 RPUSD1Q9UJJ7 312 aaKnown RBP2.97□□□□□ -1.93
CAST-242ENST00000515063 FAM215AQ9Y5M1 114 aa2.97□□□□□ -1.93
CAST-242ENST00000515063 LINC00312Q9Y6C7 94 aa2.97□□□□□ -1.93
CAST-242ENST00000515063 PXMP4Q9Y6I8 212 aa2.97□□□□□ -1.93
CAST-242ENST00000515063 SMAD5-AS1Q9Y6J3 95 aa2.97□□□□□ -1.93
CAST-242ENST00000515063 DOCK11Q5JSL3 2073 aa2.97□□□□□ -1.93
CAST-242ENST00000515063 NOTCH3Q9UM47 2321 aa2.97□□□□□ -1.93
CAST-242ENST00000515063 USP34Q70CQ2 3546 aa2.97□□□□□ -1.93
CAST-242ENST00000515063 TET2Q6N021 2002 aaPredicted RBP2.97□□□□□ -1.93
CAST-242ENST00000515063 FAM186AA6NE01 2351 aa2.96□□□□□ -1.94
CAST-242ENST00000515063 NCOR1O75376 2440 aa2.96□□□□□ -1.94
CAST-242ENST00000515063 TRAV38-1A0A0B4J264 116 aa2.96□□□□□ -1.94
CAST-242ENST00000515063 SPAARA0A1B0GVQ0 90 aa2.96□□□□□ -1.94
CAST-242ENST00000515063 NKX6-3A6NJ46 265 aa2.96□□□□□ -1.94
CAST-242ENST00000515063 C11orf94C9JXX5 98 aa2.96□□□□□ -1.94
CAST-242ENST00000515063 M0R1B8 84 aa2.96□□□□□ -1.94
CAST-242ENST00000515063 UPK2O00526 184 aa2.96□□□□□ -1.94
CAST-242ENST00000515063 HMGB3O15347 200 aaKnown RBP2.96□□□□□ -1.94
CAST-242ENST00000515063 GATCO43716 136 aaKnown RBP2.96□□□□□ -1.94
CAST-242ENST00000515063 YIF1AO95070 293 aa2.96□□□□□ -1.94
CAST-242ENST00000515063 FSTL3O95633 263 aa2.96□□□□□ -1.94
CAST-242ENST00000515063 GCGP01275 180 aa2.96□□□□□ -1.94
CAST-242ENST00000515063 IGHV1-46P01743 117 aa2.96□□□□□ -1.94
CAST-242ENST00000515063 GYPAP02724 150 aa2.96□□□□□ -1.94
CAST-242ENST00000515063 HIST1H1BP16401 226 aaKnown RBP2.96□□□□□ -1.94
CAST-242ENST00000515063 NPY1RP25929 384 aa2.96□□□□□ -1.94
CAST-242ENST00000515063 GALR1P47211 349 aa2.96□□□□□ -1.94
CAST-242ENST00000515063 ZNF83P51522 516 aa2.96□□□□□ -1.94
CAST-242ENST00000515063 TNFAIP6P98066 277 aaPredicted RBP2.96□□□□□ -1.94
CAST-242ENST00000515063 PRCDQ00LT1 54 aa2.96□□□□□ -1.94
CAST-242ENST00000515063 PAX2Q02962 417 aa2.96□□□□□ -1.94
CAST-242ENST00000515063 TFF3Q07654 80 aa2.96□□□□□ -1.94
CAST-242ENST00000515063 ZNF415Q09FC8 603 aa2.96□□□□□ -1.94
CAST-242ENST00000515063 EDDM3AQ14507 147 aa2.96□□□□□ -1.94
CAST-242ENST00000515063 CT45A1Q5HYN5 189 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms