RNA–Protein interactions for RNA: ENST00000514183.5

RACK1-231, Transcript of receptor for activated C kinase 1, human

TSL 2

Gene RACK1, Length 1,439 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-231	ENST00000514183	ZNF709	Q8N972	641 aa		5.27	□□□□□ -1.57
RACK1-231	ENST00000514183	NARS2	Q96I59	477 aa	Known RBP	5.27	□□□□□ -1.57
RACK1-231	ENST00000514183	NPCDR1	Q9BY65	106 aa		5.27	□□□□□ -1.57
RACK1-231	ENST00000514183	FBXL15	Q9H469	300 aa		5.27	□□□□□ -1.57
RACK1-231	ENST00000514183	TMEM231	Q9H6L2	316 aa		5.27	□□□□□ -1.57
RACK1-231	ENST00000514183	VSIR	Q9H7M9	311 aa		5.27	□□□□□ -1.57
RACK1-231	ENST00000514183	TREM1	Q9NP99	234 aa		5.27	□□□□□ -1.57
RACK1-231	ENST00000514183	TBL2	Q9Y4P3	447 aa	Known RBP	5.27	□□□□□ -1.57
RACK1-231	ENST00000514183	C17orf112	F2Z3M2	114 aa		5.26	□□□□□ -1.57
RACK1-231	ENST00000514183	NPFF	O15130	113 aa		5.26	□□□□□ -1.57
RACK1-231	ENST00000514183	NBR2	O15453	112 aa		5.26	□□□□□ -1.57
RACK1-231	ENST00000514183	OR13C7	P0DN81	318 aa		5.26	□□□□□ -1.57
RACK1-231	ENST00000514183	RAB2A	P61019	212 aa		5.26	□□□□□ -1.57
RACK1-231	ENST00000514183	CCL20	P78556	96 aa		5.26	□□□□□ -1.57
RACK1-231	ENST00000514183	DEFB121	Q5J5C9	76 aa		5.26	□□□□□ -1.57
RACK1-231	ENST00000514183	FFAR4	Q5NUL3	377 aa		5.26	□□□□□ -1.57
RACK1-231	ENST00000514183	ACSM6	Q6P461	480 aa		5.26	□□□□□ -1.57
RACK1-231	ENST00000514183	SPSB3	Q6PJ21	355 aa		5.26	□□□□□ -1.57
RACK1-231	ENST00000514183	PPP1R27	Q86WC6	154 aa		5.26	□□□□□ -1.57
RACK1-231	ENST00000514183	OR2T10	Q8NGZ9	312 aa		5.26	□□□□□ -1.57
RACK1-231	ENST00000514183	SFT2D1	Q8WV19	159 aa		5.26	□□□□□ -1.57
RACK1-231	ENST00000514183	MISP3	Q96FF7	219 aa		5.26	□□□□□ -1.57
RACK1-231	ENST00000514183	RPRM	Q9NS64	109 aa		5.26	□□□□□ -1.57
RACK1-231	ENST00000514183	KIAA1456	Q9P272	454 aa		5.26	□□□□□ -1.57
RACK1-231	ENST00000514183	SOX21	Q9Y651	276 aa	Predicted RBP	5.26	□□□□□ -1.57
RACK1-231	ENST00000514183	KMT2C	Q8NEZ4	4911 aa	Known RBP	5.26	□□□□□ -1.57
RACK1-231	ENST00000514183	IGLC7	A0M8Q6	106 aa		5.25	□□□□□ -1.57
RACK1-231	ENST00000514183	TMEM218	A2RU14	115 aa		5.25	□□□□□ -1.57
RACK1-231	ENST00000514183	FNDC10	F2Z333	226 aa		5.25	□□□□□ -1.57
RACK1-231	ENST00000514183	FCN1	O00602	326 aa		5.25	□□□□□ -1.57
RACK1-231	ENST00000514183	MPDU1	O75352	247 aa		5.25	□□□□□ -1.57
RACK1-231	ENST00000514183	HBE1	P02100	147 aa		5.25	□□□□□ -1.57
RACK1-231	ENST00000514183	MB	P02144	154 aa		5.25	□□□□□ -1.57
RACK1-231	ENST00000514183	PRB2	P02812	416 aa	Predicted RBP	5.25	□□□□□ -1.57
RACK1-231	ENST00000514183	REG1A	P05451	166 aa		5.25	□□□□□ -1.57
RACK1-231	ENST00000514183	AREG	P15514	252 aa		5.25	□□□□□ -1.57
RACK1-231	ENST00000514183	TMEM11	P17152	192 aa		5.25	□□□□□ -1.57
RACK1-231	ENST00000514183	SAA4	P35542	130 aa		5.25	□□□□□ -1.57
RACK1-231	ENST00000514183	SUB1	P53999	127 aa	Known RBP eCLIP	5.25	□□□□□ -1.57	2e-55	■□□□□ 10
RACK1-231	ENST00000514183	ZNF726P1	Q15940	193 aa		5.25	□□□□□ -1.57
RACK1-231	ENST00000514183	LCN15	Q6UWW0	184 aa		5.25	□□□□□ -1.57
RACK1-231	ENST00000514183	SSX7	Q7RTT5	188 aa		5.25	□□□□□ -1.57
RACK1-231	ENST00000514183	CCDC28A	Q8IWP9	274 aa		5.25	□□□□□ -1.57
RACK1-231	ENST00000514183	KLHDC1	Q8N7A1	406 aa		5.25	□□□□□ -1.57
RACK1-231	ENST00000514183	LFNG	Q8NES3	379 aa		5.25	□□□□□ -1.57
RACK1-231	ENST00000514183	WFDC9	Q8NEX5	89 aa		5.25	□□□□□ -1.57
RACK1-231	ENST00000514183	NPB	Q8NG41	125 aa		5.25	□□□□□ -1.57
RACK1-231	ENST00000514183	MALSU1	Q96EH3	234 aa		5.25	□□□□□ -1.57
RACK1-231	ENST00000514183	AJUBA	Q96IF1	538 aa		5.25	□□□□□ -1.57
RACK1-231	ENST00000514183	P2RX4	Q99571	388 aa		5.25	□□□□□ -1.57
RACK1-231	ENST00000514183	MGST2	Q99735	147 aa		5.25	□□□□□ -1.57
RACK1-231	ENST00000514183	B9D2	Q9BPU9	175 aa		5.25	□□□□□ -1.57
RACK1-231	ENST00000514183	PBDC1	Q9BVG4	233 aa		5.25	□□□□□ -1.57
RACK1-231	ENST00000514183	NPVF	Q9HCQ7	196 aa		5.25	□□□□□ -1.57
RACK1-231	ENST00000514183	PITPNC1	Q9UKF7	332 aa		5.25	□□□□□ -1.57
RACK1-231	ENST00000514183	LSM4	Q9Y4Z0	139 aa	Known RBP	5.25	□□□□□ -1.57
RACK1-231	ENST00000514183	TRAV1-1	A0A0B4J248	108 aa		5.24	□□□□□ -1.57
RACK1-231	ENST00000514183	MAP1LC3B2	A6NCE7	125 aa		5.24	□□□□□ -1.57
RACK1-231	ENST00000514183	TEX22	C9J3V5	150 aa		5.24	□□□□□ -1.57
RACK1-231	ENST00000514183		C9JQL5	133 aa		5.24	□□□□□ -1.57
RACK1-231	ENST00000514183	EIF3G	O75821	320 aa	Known RBP eCLIP	5.24	□□□□□ -1.57
RACK1-231	ENST00000514183	NDUFA3	O95167	84 aa		5.24	□□□□□ -1.57
RACK1-231	ENST00000514183	CNIH1	O95406	144 aa		5.24	□□□□□ -1.57
RACK1-231	ENST00000514183	CD5	P06127	495 aa		5.24	□□□□□ -1.57
RACK1-231	ENST00000514183	FAM106CP	P0CH98	169 aa		5.24	□□□□□ -1.57
RACK1-231	ENST00000514183	APELA	P0DMC3	54 aa		5.24	□□□□□ -1.57
RACK1-231	ENST00000514183	M6PR	P20645	277 aa		5.24	□□□□□ -1.57
RACK1-231	ENST00000514183	GPX4	P36969	197 aa	Predicted RBP	5.24	□□□□□ -1.57
RACK1-231	ENST00000514183	OPRK1	P41145	380 aa		5.24	□□□□□ -1.57
RACK1-231	ENST00000514183	SSBP2	P81877	361 aa	Predicted RBP	5.24	□□□□□ -1.57
RACK1-231	ENST00000514183	RAB31	Q13636	194 aa		5.24	□□□□□ -1.57
RACK1-231	ENST00000514183	EBI3	Q14213	229 aa		5.24	□□□□□ -1.57
RACK1-231	ENST00000514183	PEA15	Q15121	130 aa		5.24	□□□□□ -1.57
RACK1-231	ENST00000514183	MLANA	Q16655	118 aa		5.24	□□□□□ -1.57
RACK1-231	ENST00000514183	GUK1	Q16774	197 aa		5.24	□□□□□ -1.57
RACK1-231	ENST00000514183	C5orf64	Q2M2E5	130 aa		5.24	□□□□□ -1.57
RACK1-231	ENST00000514183	ACOT6	Q3I5F7	207 aa	Predicted RBP	5.24	□□□□□ -1.57
RACK1-231	ENST00000514183	MIC13	Q5XKP0	118 aa		5.24	□□□□□ -1.57
RACK1-231	ENST00000514183	FAM122C	Q6P4D5	195 aa		5.24	□□□□□ -1.57
RACK1-231	ENST00000514183	TEPP	Q6URK8	271 aa		5.24	□□□□□ -1.57
RACK1-231	ENST00000514183	C19orf35	Q6ZS72	473 aa		5.24	□□□□□ -1.57
RACK1-231	ENST00000514183	SLC16A13	Q7RTY0	426 aa		5.24	□□□□□ -1.57
RACK1-231	ENST00000514183	RPP25L	Q8N5L8	163 aa	Known RBP	5.24	□□□□□ -1.57
RACK1-231	ENST00000514183		Q8N6K4	173 aa		5.24	□□□□□ -1.57
RACK1-231	ENST00000514183	OR10G4	Q8NGN3	311 aa		5.24	□□□□□ -1.57
RACK1-231	ENST00000514183	OR10G9	Q8NGN4	311 aa		5.24	□□□□□ -1.57
RACK1-231	ENST00000514183	OR10G7	Q8NGN6	311 aa		5.24	□□□□□ -1.57
RACK1-231	ENST00000514183	RNASEH2C	Q8TDP1	164 aa	Known RBP	5.24	□□□□□ -1.57
RACK1-231	ENST00000514183	ABHD5	Q8WTS1	349 aa		5.24	□□□□□ -1.57
RACK1-231	ENST00000514183	MBD3L1	Q8WWY6	194 aa		5.24	□□□□□ -1.57
RACK1-231	ENST00000514183	SRSF12	Q8WXF0	261 aa	Known RBP	5.24	□□□□□ -1.57
RACK1-231	ENST00000514183	SLC35E1	Q96K37	410 aa		5.24	□□□□□ -1.57
RACK1-231	ENST00000514183	MCRIP2	Q9BUT9	160 aa	Known RBP	5.24	□□□□□ -1.57
RACK1-231	ENST00000514183	GGTLC1	Q9BX51	225 aa		5.24	□□□□□ -1.57
RACK1-231	ENST00000514183	ACTR3C	Q9C0K3	210 aa	Predicted RBP	5.24	□□□□□ -1.57
RACK1-231	ENST00000514183	MAP1LC3B	Q9GZQ8	125 aa		5.24	□□□□□ -1.57
RACK1-231	ENST00000514183	EIF5A2	Q9GZV4	153 aa	Known RBP	5.24	□□□□□ -1.57
RACK1-231	ENST00000514183	SLC25A22	Q9H936	323 aa		5.24	□□□□□ -1.57
RACK1-231	ENST00000514183	KCNIP2	Q9NS61	270 aa		5.24	□□□□□ -1.57
RACK1-231	ENST00000514183	C19orf73	Q9NVV2	129 aa		5.24	□□□□□ -1.57

Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms