RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 S100A7AQ86SG5 101 aa2.35□□□□□ -2.03
HMGB1P47-201ENST00000511281 DOHHQ9BU89 302 aa2.35□□□□□ -2.03
HMGB1P47-201ENST00000511281 C9orf16Q9BUW7 83 aa2.35□□□□□ -2.03
HMGB1P47-201ENST00000511281 TIMM21Q9BVV7 248 aa2.35□□□□□ -2.03
HMGB1P47-201ENST00000511281 CCDC90BQ9GZT6 254 aa2.35□□□□□ -2.03
HMGB1P47-201ENST00000511281 LMTK2Q8IWU2 1503 aa2.35□□□□□ -2.03
HMGB1P47-201ENST00000511281 NWD1Q149M9 1564 aa2.35□□□□□ -2.03
HMGB1P47-201ENST00000511281 KIF13BQ9NQT8 1826 aa2.35□□□□□ -2.03
HMGB1P47-201ENST00000511281 GREB1Q4ZG55 1949 aa2.34□□□□□ -2.03
HMGB1P47-201ENST00000511281 GCC2Q8IWJ2 1684 aa2.34□□□□□ -2.03
HMGB1P47-201ENST00000511281 hCG_1818297A0A087WSY0 165 aa2.34□□□□□ -2.03
HMGB1P47-201ENST00000511281 A0A0D9SEW6 157 aa2.34□□□□□ -2.03
HMGB1P47-201ENST00000511281 RFPL4AA6NLU0 287 aa2.34□□□□□ -2.03
HMGB1P47-201ENST00000511281 A8MT66 165 aa2.34□□□□□ -2.03
HMGB1P47-201ENST00000511281 RFPL4AL1F8VTS6 287 aa2.34□□□□□ -2.03
HMGB1P47-201ENST00000511281 BUB1B-PAK6H3BSN5 160 aa2.34□□□□□ -2.03
HMGB1P47-201ENST00000511281 NAPSAO96009 420 aa2.34□□□□□ -2.03
HMGB1P47-201ENST00000511281 NEFHP12036 1026 aa2.34□□□□□ -2.03
HMGB1P47-201ENST00000511281 DEFA1P59665 94 aa2.34□□□□□ -2.03
HMGB1P47-201ENST00000511281 HSPE1P61604 102 aaKnown RBP2.34□□□□□ -2.03
HMGB1P47-201ENST00000511281 KISS1Q15726 138 aa2.34□□□□□ -2.03
HMGB1P47-201ENST00000511281 HACD4Q5VWC8 232 aa2.34□□□□□ -2.03
HMGB1P47-201ENST00000511281 TERB2Q8NHR7 220 aa2.34□□□□□ -2.03
HMGB1P47-201ENST00000511281 PFN4Q8NHR9 129 aa2.34□□□□□ -2.03
HMGB1P47-201ENST00000511281 GNPDA2Q8TDQ7 276 aa2.34□□□□□ -2.03
HMGB1P47-201ENST00000511281 C11orf40Q8WZ69 217 aa2.34□□□□□ -2.03
HMGB1P47-201ENST00000511281 LRP6O75581 1613 aa2.34□□□□□ -2.04
HMGB1P47-201ENST00000511281 KDM5AP29375 1690 aaKnown RBP2.34□□□□□ -2.04
HMGB1P47-201ENST00000511281 NKTRP30414 1462 aaKnown RBP2.33□□□□□ -2.04
HMGB1P47-201ENST00000511281 MYOM2P54296 1465 aa2.33□□□□□ -2.04
HMGB1P47-201ENST00000511281 TRPM2O94759 1503 aa2.33□□□□□ -2.04
HMGB1P47-201ENST00000511281 TMEM131LA2VDJ0 1609 aa2.33□□□□□ -2.04
HMGB1P47-201ENST00000511281 TRAPPC2LH3BP13 241 aa2.33□□□□□ -2.04
HMGB1P47-201ENST00000511281 J3QQQ9 107 aa2.33□□□□□ -2.04
HMGB1P47-201ENST00000511281 P0DMU3 169 aa2.33□□□□□ -2.04
HMGB1P47-201ENST00000511281 FAM231AP0DMU4 169 aa2.33□□□□□ -2.04
HMGB1P47-201ENST00000511281 FAM231CP0DMU5 169 aa2.33□□□□□ -2.04
HMGB1P47-201ENST00000511281 RPS4Y1P22090 263 aaKnown RBP2.33□□□□□ -2.04
HMGB1P47-201ENST00000511281 PEBP1P30086 187 aaKnown RBP2.33□□□□□ -2.04
HMGB1P47-201ENST00000511281 TMEM258P61165 79 aa2.33□□□□□ -2.04
HMGB1P47-201ENST00000511281 RPL26P61254 145 aaKnown RBP2.33□□□□□ -2.04
HMGB1P47-201ENST00000511281 SUPT4H1P63272 117 aaKnown RBP2.33□□□□□ -2.04
HMGB1P47-201ENST00000511281 FAM27BQ5VT28 67 aa2.33□□□□□ -2.04
HMGB1P47-201ENST00000511281 KTN1-AS1Q86SY8 53 aa2.33□□□□□ -2.04
HMGB1P47-201ENST00000511281 KRTAP13-1Q8IUC0 172 aa2.33□□□□□ -2.04
HMGB1P47-201ENST00000511281 KRT222Q8N1A0 295 aa2.33□□□□□ -2.04
HMGB1P47-201ENST00000511281 SPACA4Q8TDM5 124 aa2.33□□□□□ -2.04
HMGB1P47-201ENST00000511281 AP3S1Q92572 193 aa2.33□□□□□ -2.04
HMGB1P47-201ENST00000511281 PRRT1Q99946 306 aa2.33□□□□□ -2.04
HMGB1P47-201ENST00000511281 RPL26L1Q9UNX3 145 aaKnown RBP2.33□□□□□ -2.04
HMGB1P47-201ENST00000511281 FAM32AQ9Y421 112 aaKnown RBP2.33□□□□□ -2.04
HMGB1P47-201ENST00000511281 PHLPP1O60346 1717 aa2.33□□□□□ -2.04
HMGB1P47-201ENST00000511281 NUMA1Q14980 2115 aa2.33□□□□□ -2.04
HMGB1P47-201ENST00000511281 SMG6Q86US8 1419 aaKnown RBP2.33□□□□□ -2.04
HMGB1P47-201ENST00000511281 NRXN1Q9ULB1 1477 aa2.33□□□□□ -2.04
HMGB1P47-201ENST00000511281 PTPRBP23467 1997 aa2.32□□□□□ -2.04
HMGB1P47-201ENST00000511281 UNC13BO14795 1591 aa2.32□□□□□ -2.04
HMGB1P47-201ENST00000511281 HEATR5AQ86XA9 2040 aa2.32□□□□□ -2.04
HMGB1P47-201ENST00000511281 E9PCH4 1651 aa2.32□□□□□ -2.04
HMGB1P47-201ENST00000511281 SULT1B1O43704 296 aa2.32□□□□□ -2.04
HMGB1P47-201ENST00000511281 C1QBP02746 253 aa2.32□□□□□ -2.04
HMGB1P47-201ENST00000511281 PPBPP02775 128 aa2.32□□□□□ -2.04
HMGB1P47-201ENST00000511281 DEFA4P12838 97 aa2.32□□□□□ -2.04
HMGB1P47-201ENST00000511281 Q6Q795 121 aa2.32□□□□□ -2.04
HMGB1P47-201ENST00000511281 KRTAP5-2Q701N4 177 aa2.32□□□□□ -2.04
HMGB1P47-201ENST00000511281 DCANP1Q8TF63 244 aa2.32□□□□□ -2.04
HMGB1P47-201ENST00000511281 CEP19Q96LK0 163 aa2.32□□□□□ -2.04
HMGB1P47-201ENST00000511281 SCGB3A1Q96QR1 104 aa2.32□□□□□ -2.04
HMGB1P47-201ENST00000511281 PHB2Q99623 299 aa2.32□□□□□ -2.04
HMGB1P47-201ENST00000511281 HSPB9Q9BQS6 159 aa2.32□□□□□ -2.04
HMGB1P47-201ENST00000511281 TVP23BQ9NYZ1 205 aa2.32□□□□□ -2.04
HMGB1P47-201ENST00000511281 OPTCQ9UBM4 332 aa2.32□□□□□ -2.04
HMGB1P47-201ENST00000511281 CYSLTR1Q9Y271 337 aa2.32□□□□□ -2.04
HMGB1P47-201ENST00000511281 DIP2AQ14689 1571 aa2.32□□□□□ -2.04
HMGB1P47-201ENST00000511281 IQGAP3Q86VI3 1631 aa2.31□□□□□ -2.04
HMGB1P47-201ENST00000511281 NRXN3Q9Y4C0 1643 aa2.31□□□□□ -2.04
HMGB1P47-201ENST00000511281 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.31□□□□□ -2.04
HMGB1P47-201ENST00000511281 CPAMD8Q8IZJ3 1885 aa2.31□□□□□ -2.04
HMGB1P47-201ENST00000511281 NCKAP5O14513 1909 aa2.31□□□□□ -2.04
HMGB1P47-201ENST00000511281 A0A1B0GVG6 124 aa2.31□□□□□ -2.04
HMGB1P47-201ENST00000511281 CLPSP04118 112 aa2.31□□□□□ -2.04
HMGB1P47-201ENST00000511281 PPP1R2P41236 205 aa2.31□□□□□ -2.04
HMGB1P47-201ENST00000511281 CDC42P60953 191 aa2.31□□□□□ -2.04
HMGB1P47-201ENST00000511281 KRR1Q13601 381 aaKnown RBP2.31□□□□□ -2.04
HMGB1P47-201ENST00000511281 PPP1R2P3Q6NXS1 205 aa2.31□□□□□ -2.04
HMGB1P47-201ENST00000511281 LYG2Q86SG7 212 aa2.31□□□□□ -2.04
HMGB1P47-201ENST00000511281 GPR146Q96CH1 333 aa2.31□□□□□ -2.04
HMGB1P47-201ENST00000511281 ENY2Q9NPA8 101 aa2.31□□□□□ -2.04
HMGB1P47-201ENST00000511281 NCOA3Q9Y6Q9 1424 aa2.31□□□□□ -2.04
HMGB1P47-201ENST00000511281 ASXL1Q8IXJ9 1541 aa2.31□□□□□ -2.04
HMGB1P47-201ENST00000511281 SETBP1Q9Y6X0 1596 aa2.31□□□□□ -2.04
HMGB1P47-201ENST00000511281 XRN1Q8IZH2 1706 aaKnown RBP2.31□□□□□ -2.04
HMGB1P47-201ENST00000511281 ZFHX2Q9C0A1 2572 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P47-201ENST00000511281 MEIS3P1A6NDR6 274 aa2.3□□□□□ -2.04
HMGB1P47-201ENST00000511281 ZNF860A6NHJ4 632 aa2.3□□□□□ -2.04
HMGB1P47-201ENST00000511281 HMSDA8MTL9 139 aa2.3□□□□□ -2.04
HMGB1P47-201ENST00000511281 TMEM238C9JI98 176 aa2.3□□□□□ -2.04
HMGB1P47-201ENST00000511281 PGLYRP1O75594 196 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P47-201ENST00000511281 C1QCP02747 245 aa2.3□□□□□ -2.04
HMGB1P47-201ENST00000511281 LCE1CQ5T751 118 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms