RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 ZNF436Q9C0F3 470 aaPredicted RBP6.59□□□□□ -1.35
PDLIM5-213ENST00000509357 ZFAND3Q9H8U3 227 aa6.59□□□□□ -1.35
PDLIM5-213ENST00000509357 ENY2Q9NPA8 101 aa6.59□□□□□ -1.35
PDLIM5-213ENST00000509357 GAR1Q9NY12 217 aaKnown RBP6.59□□□□□ -1.35
PDLIM5-213ENST00000509357 OR5AC2Q9NZP5 309 aa6.59□□□□□ -1.35
PDLIM5-213ENST00000509357 GSKIPQ9P0R6 139 aa6.59□□□□□ -1.35
PDLIM5-213ENST00000509357 IGSF23A1L1A6 192 aa6.58□□□□□ -1.36
PDLIM5-213ENST00000509357 C5orf51A6NDU8 294 aa6.58□□□□□ -1.36
PDLIM5-213ENST00000509357 NUPL2O15504 423 aaKnown RBP6.58□□□□□ -1.36
PDLIM5-213ENST00000509357 YIF1AO95070 293 aa6.58□□□□□ -1.36
PDLIM5-213ENST00000509357 SCAF4O95104 1147 aaKnown RBP6.58□□□□□ -1.36
PDLIM5-213ENST00000509357 IGLC1P0CG04 106 aa6.58□□□□□ -1.36
PDLIM5-213ENST00000509357 RGS21Q2M5E4 152 aa6.58□□□□□ -1.36
PDLIM5-213ENST00000509357 SPSB3Q6PJ21 355 aa6.58□□□□□ -1.36
PDLIM5-213ENST00000509357 BTNL8Q6UX41 500 aa6.58□□□□□ -1.36
PDLIM5-213ENST00000509357 DEFB125Q8N687 156 aa6.58□□□□□ -1.36
PDLIM5-213ENST00000509357 STPG3Q8N7X2 389 aa6.58□□□□□ -1.36
PDLIM5-213ENST00000509357 MARC2Q969Z3 335 aa6.58□□□□□ -1.36
PDLIM5-213ENST00000509357 SMIM8Q96KF7 97 aa6.58□□□□□ -1.36
PDLIM5-213ENST00000509357 SPATA25Q9BR10 227 aa6.58□□□□□ -1.36
PDLIM5-213ENST00000509357 RNF126Q9BV68 326 aa6.58□□□□□ -1.36
PDLIM5-213ENST00000509357 C19orf73Q9NVV2 129 aa6.58□□□□□ -1.36
PDLIM5-213ENST00000509357 MGAT4CQ9UBM8 478 aa6.58□□□□□ -1.36
PDLIM5-213ENST00000509357 FAM24AA6NFZ4 105 aa6.57□□□□□ -1.36
PDLIM5-213ENST00000509357 ZNF785A8K8V0 405 aa6.57□□□□□ -1.36
PDLIM5-213ENST00000509357 A8MWP6 167 aa6.57□□□□□ -1.36
PDLIM5-213ENST00000509357 A8MZ25 164 aa6.57□□□□□ -1.36
PDLIM5-213ENST00000509357 OR11H12B2RN74 326 aa6.57□□□□□ -1.36
PDLIM5-213ENST00000509357 ZNF207O43670 478 aaKnown RBP6.57□□□□□ -1.36
PDLIM5-213ENST00000509357 IFNA10P01566 189 aa6.57□□□□□ -1.36
PDLIM5-213ENST00000509357 IFNA21P01568 189 aa6.57□□□□□ -1.36
PDLIM5-213ENST00000509357 APOHP02749 345 aaPredicted RBP6.57□□□□□ -1.36
PDLIM5-213ENST00000509357 CD7P09564 240 aa6.57□□□□□ -1.36
PDLIM5-213ENST00000509357 METTL15P1P0C7V9 234 aa6.57□□□□□ -1.36
PDLIM5-213ENST00000509357 OPRK1P41145 380 aa6.57□□□□□ -1.36
PDLIM5-213ENST00000509357 RND2P52198 227 aa6.57□□□□□ -1.36
PDLIM5-213ENST00000509357 SUB1P53999 127 aaKnown RBP eCLIP6.57□□□□□ -1.36
PDLIM5-213ENST00000509357 MFAP4P55083 255 aa6.57□□□□□ -1.36
PDLIM5-213ENST00000509357 ELLP55199 621 aaPredicted RBP6.57□□□□□ -1.36
PDLIM5-213ENST00000509357 RELQ04864 619 aaPredicted RBP6.57□□□□□ -1.36
PDLIM5-213ENST00000509357 GAMTQ14353 236 aa6.57□□□□□ -1.36
PDLIM5-213ENST00000509357 HAGHQ16775 308 aa6.57□□□□□ -1.36
PDLIM5-213ENST00000509357 TIGITQ495A1 244 aa6.57□□□□□ -1.36
PDLIM5-213ENST00000509357 SPANXN5Q5MJ07 72 aa6.57□□□□□ -1.36
PDLIM5-213ENST00000509357 LAMTOR1Q6IAA8 161 aa6.57□□□□□ -1.36
PDLIM5-213ENST00000509357 TMEM61Q8N0U2 210 aa6.57□□□□□ -1.36
PDLIM5-213ENST00000509357 LILRB2Q8N423 598 aa6.57□□□□□ -1.36
PDLIM5-213ENST00000509357 OR4X1Q8NH49 305 aa6.57□□□□□ -1.36
PDLIM5-213ENST00000509357 TMEM190Q8WZ59 177 aa6.57□□□□□ -1.36
PDLIM5-213ENST00000509357 NPIPB3Q92617 1050 aa6.57□□□□□ -1.36
PDLIM5-213ENST00000509357 SRD5A3Q9H8P0 318 aa6.57□□□□□ -1.36
PDLIM5-213ENST00000509357 GPN1Q9HCN4 374 aaPredicted RBP6.57□□□□□ -1.36
PDLIM5-213ENST00000509357 DAZ1Q9NQZ3 744 aaKnown RBP6.57□□□□□ -1.36
PDLIM5-213ENST00000509357 PSENENQ9NZ42 101 aa6.57□□□□□ -1.36
PDLIM5-213ENST00000509357 MRPL27Q9P0M9 148 aaKnown RBP6.57□□□□□ -1.36
PDLIM5-213ENST00000509357 MLXQ9UH92 298 aa6.57□□□□□ -1.36
PDLIM5-213ENST00000509357 LSM5Q9Y4Y9 91 aaKnown RBP6.57□□□□□ -1.36
PDLIM5-213ENST00000509357 U3KQ87 197 aa6.57□□□□□ -1.36
PDLIM5-213ENST00000509357 TENM3Q9P273 2699 aa6.57□□□□□ -1.36
PDLIM5-213ENST00000509357 NDUFA4O00483 81 aa6.56□□□□□ -1.36
PDLIM5-213ENST00000509357 GNG7O60262 68 aa6.56□□□□□ -1.36
PDLIM5-213ENST00000509357 CLN5O75503 358 aa6.56□□□□□ -1.36
PDLIM5-213ENST00000509357 DEDDO75618 318 aa6.56□□□□□ -1.36
PDLIM5-213ENST00000509357 ZNF90Q03938 601 aa6.56□□□□□ -1.36
PDLIM5-213ENST00000509357 LRRC37A5PQ49AS3 106 aa6.56□□□□□ -1.36
PDLIM5-213ENST00000509357 TOMM20LQ6UXN7 152 aa6.56□□□□□ -1.36
PDLIM5-213ENST00000509357 GSG1LQ6UXU4 331 aa6.56□□□□□ -1.36
PDLIM5-213ENST00000509357 ACOT7LQ6ZUV0 252 aa6.56□□□□□ -1.36
PDLIM5-213ENST00000509357 TMEM116Q8NCL8 245 aa6.56□□□□□ -1.36
PDLIM5-213ENST00000509357 RNASEH2CQ8TDP1 164 aaKnown RBP6.56□□□□□ -1.36
PDLIM5-213ENST00000509357 ATP6V0BQ99437 205 aa6.56□□□□□ -1.36
PDLIM5-213ENST00000509357 TXN2Q99757 166 aa6.56□□□□□ -1.36
PDLIM5-213ENST00000509357 TM2D3Q9BRN9 247 aa6.56□□□□□ -1.36
PDLIM5-213ENST00000509357 NMES1Q9C002 83 aa6.56□□□□□ -1.36
PDLIM5-213ENST00000509357 HIPK2Q9H2X6 1198 aa6.56□□□□□ -1.36
PDLIM5-213ENST00000509357 KMT2CQ8NEZ4 4911 aaKnown RBP6.55□□□□□ -1.36
PDLIM5-213ENST00000509357 IGHV3-49A0A0A0MS15 119 aa6.55□□□□□ -1.36
PDLIM5-213ENST00000509357 TRAV25A0A0B4J276 109 aa6.55□□□□□ -1.36
PDLIM5-213ENST00000509357 C3orf84H3BNL1 204 aa6.55□□□□□ -1.36
PDLIM5-213ENST00000509357 SSNA1O43805 119 aa6.55□□□□□ -1.36
PDLIM5-213ENST00000509357 MED6O75586 246 aa6.55□□□□□ -1.36
PDLIM5-213ENST00000509357 C8orf88P0DMB2 117 aa6.55□□□□□ -1.36
PDLIM5-213ENST00000509357 LYL1P12980 280 aa6.55□□□□□ -1.36
PDLIM5-213ENST00000509357 GATA2P23769 480 aaPredicted RBP6.55□□□□□ -1.36
PDLIM5-213ENST00000509357 NPBWR1P48145 328 aa6.55□□□□□ -1.36
PDLIM5-213ENST00000509357 USF2Q15853 346 aaPredicted RBP6.55□□□□□ -1.36
PDLIM5-213ENST00000509357 MUC7Q8TAX7 377 aa6.55□□□□□ -1.36
PDLIM5-213ENST00000509357 PPP1R1CQ8WVI7 109 aa6.55□□□□□ -1.36
PDLIM5-213ENST00000509357 ACY3Q96HD9 319 aa6.55□□□□□ -1.36
PDLIM5-213ENST00000509357 WFDC10AQ9H1F0 79 aa6.55□□□□□ -1.36
PDLIM5-213ENST00000509357 STAB2Q8WWQ8 2551 aa6.54□□□□□ -1.36
PDLIM5-213ENST00000509357 IGHV3OR16-13A0A075B7E8 117 aa6.54□□□□□ -1.36
PDLIM5-213ENST00000509357 IGHV3-74A0A0B4J1X5 117 aa6.54□□□□□ -1.36
PDLIM5-213ENST00000509357 A0A1B0GVG6 124 aa6.54□□□□□ -1.36
PDLIM5-213ENST00000509357 SMLR1H3BR10 107 aa6.54□□□□□ -1.36
PDLIM5-213ENST00000509357 CORTO00230 105 aa6.54□□□□□ -1.36
PDLIM5-213ENST00000509357 TSC22D2O75157 780 aa6.54□□□□□ -1.36
PDLIM5-213ENST00000509357 SCGB2A1O75556 95 aa6.54□□□□□ -1.36
PDLIM5-213ENST00000509357 CST7O76096 145 aa6.54□□□□□ -1.36
PDLIM5-213ENST00000509357 MPC2O95563 127 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms