RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 UBE2L3P68036 154 aaKnown RBP5.92□□□□□ -1.46
LIMCH1-207ENST00000508466 PPP1R32Q7Z5V6 425 aa5.92□□□□□ -1.46
LIMCH1-207ENST00000508466 Q8TCH9 128 aa5.92□□□□□ -1.46
LIMCH1-207ENST00000508466 H1FXQ92522 213 aaKnown RBP5.92□□□□□ -1.46
LIMCH1-207ENST00000508466 DEFB126Q9BYW3 111 aa5.92□□□□□ -1.46
LIMCH1-207ENST00000508466 OSTCQ9NRP0 149 aa5.92□□□□□ -1.46
LIMCH1-207ENST00000508466 SMPXQ9UHP9 88 aa5.92□□□□□ -1.46
LIMCH1-207ENST00000508466 KIR2DS5A0A0G2JLQ3 304 aa5.92□□□□□ -1.46
LIMCH1-207ENST00000508466 A0A0G2JNG1 304 aa5.92□□□□□ -1.46
LIMCH1-207ENST00000508466 A0A1B0GW15 77 aa5.92□□□□□ -1.46
LIMCH1-207ENST00000508466 KIR2DS3K7RE56 304 aa5.92□□□□□ -1.46
LIMCH1-207ENST00000508466 OPRK1P41145 380 aa5.92□□□□□ -1.46
LIMCH1-207ENST00000508466 CSN1S1P47710 185 aa5.92□□□□□ -1.46
LIMCH1-207ENST00000508466 RPS20P60866 119 aaKnown RBP5.92□□□□□ -1.46
LIMCH1-207ENST00000508466 KIR2DS5Q14953 304 aa5.92□□□□□ -1.46
LIMCH1-207ENST00000508466 TEPPQ6URK8 271 aa5.92□□□□□ -1.46
LIMCH1-207ENST00000508466 SPANXB1Q9NS25 103 aaPredicted RBP5.92□□□□□ -1.46
LIMCH1-207ENST00000508466 MAP1AP78559 2803 aaPredicted RBP5.92□□□□□ -1.46
LIMCH1-207ENST00000508466 KMT2EQ8IZD2 1858 aa5.92□□□□□ -1.46
LIMCH1-207ENST00000508466 CNOT1A5YKK6 2376 aaKnown RBP5.91□□□□□ -1.46
LIMCH1-207ENST00000508466 TNFSF15O95150 251 aa5.91□□□□□ -1.46
LIMCH1-207ENST00000508466 RFPL3SP0C7P2 107 aa5.91□□□□□ -1.46
LIMCH1-207ENST00000508466 LINC00271P0C7V0 271 aa5.91□□□□□ -1.46
LIMCH1-207ENST00000508466 FTH1P19P0C7X4 201 aa5.91□□□□□ -1.46
LIMCH1-207ENST00000508466 SMIM13P0DJ93 91 aa5.91□□□□□ -1.46
LIMCH1-207ENST00000508466 ANKRD37Q7Z713 158 aa5.91□□□□□ -1.46
LIMCH1-207ENST00000508466 CIARTQ8N365 385 aaPredicted RBP5.91□□□□□ -1.46
LIMCH1-207ENST00000508466 KIR2DL4Q99706 377 aa5.91□□□□□ -1.46
LIMCH1-207ENST00000508466 ZNF391Q9UJN7 358 aa5.91□□□□□ -1.46
LIMCH1-207ENST00000508466 SPTY2D1-AS1A0A0U1RR47 76 aa5.91□□□□□ -1.46
LIMCH1-207ENST00000508466 PROP1O75360 226 aa5.91□□□□□ -1.46
LIMCH1-207ENST00000508466 BRI3O95415 125 aa5.91□□□□□ -1.46
LIMCH1-207ENST00000508466 REG1AP05451 166 aa5.91□□□□□ -1.46
LIMCH1-207ENST00000508466 ID1P41134 155 aa5.91□□□□□ -1.46
LIMCH1-207ENST00000508466 FOXF2Q12947 444 aa5.91□□□□□ -1.46
LIMCH1-207ENST00000508466 C1orf229Q6ZS94 237 aaPredicted RBP5.91□□□□□ -1.46
LIMCH1-207ENST00000508466 GTSCR1Q86UQ5 136 aa5.91□□□□□ -1.46
LIMCH1-207ENST00000508466 OSR1Q8TAX0 266 aaPredicted RBP5.91□□□□□ -1.46
LIMCH1-207ENST00000508466 ADTRPQ96IZ2 230 aa5.91□□□□□ -1.46
LIMCH1-207ENST00000508466 KCNIP1Q9NZI2 227 aa5.91□□□□□ -1.46
LIMCH1-207ENST00000508466 RALYQ9UKM9 306 aaKnown RBP5.91□□□□□ -1.46
LIMCH1-207ENST00000508466 THSD7BQ9C0I4 1608 aa5.91□□□□□ -1.46
LIMCH1-207ENST00000508466 ZNF716A6NP11 495 aa5.9□□□□□ -1.46
LIMCH1-207ENST00000508466 FNDC10F2Z333 226 aa5.9□□□□□ -1.46
LIMCH1-207ENST00000508466 PRRG2O14669 202 aa5.9□□□□□ -1.46
LIMCH1-207ENST00000508466 MGST3O14880 152 aa5.9□□□□□ -1.46
LIMCH1-207ENST00000508466 GFRA3O60609 400 aa5.9□□□□□ -1.46
LIMCH1-207ENST00000508466 FGF6P10767 208 aa5.9□□□□□ -1.46
LIMCH1-207ENST00000508466 ORM2P19652 201 aa5.9□□□□□ -1.46
LIMCH1-207ENST00000508466 CD27P26842 260 aa5.9□□□□□ -1.46
LIMCH1-207ENST00000508466 VEGFBP49765 207 aa5.9□□□□□ -1.46
LIMCH1-207ENST00000508466 TAS2R45P59539 299 aa5.9□□□□□ -1.46
LIMCH1-207ENST00000508466 CATR1Q13166 79 aa5.9□□□□□ -1.46
LIMCH1-207ENST00000508466 SRSF9Q13242 221 aaKnown RBP eCLIP5.9□□□□□ -1.46
LIMCH1-207ENST00000508466 FHL3Q13643 280 aa5.9□□□□□ -1.46
LIMCH1-207ENST00000508466 Q6ZS52 159 aa5.9□□□□□ -1.46
LIMCH1-207ENST00000508466 TMEM54Q969K7 222 aa5.9□□□□□ -1.46
LIMCH1-207ENST00000508466 GALMQ96C23 342 aa5.9□□□□□ -1.46
LIMCH1-207ENST00000508466 ABHD17AQ96GS6 310 aa5.9□□□□□ -1.46
LIMCH1-207ENST00000508466 VGLL1Q99990 258 aa5.9□□□□□ -1.46
LIMCH1-207ENST00000508466 C12orf49Q9H741 205 aa5.9□□□□□ -1.46
LIMCH1-207ENST00000508466 PRSS29PA6NIE9 313 aa5.9□□□□□ -1.46
LIMCH1-207ENST00000508466 C9JCJ5 164 aa5.9□□□□□ -1.46
LIMCH1-207ENST00000508466 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.9□□□□□ -1.46
LIMCH1-207ENST00000508466 IGHV4-34P06331 123 aa5.9□□□□□ -1.46
LIMCH1-207ENST00000508466 SSR4P51571 173 aa5.9□□□□□ -1.46
LIMCH1-207ENST00000508466 XGP55808 180 aa5.9□□□□□ -1.46
LIMCH1-207ENST00000508466 SEC11AP67812 179 aa5.9□□□□□ -1.46
LIMCH1-207ENST00000508466 OR1C1Q15619 314 aa5.9□□□□□ -1.46
LIMCH1-207ENST00000508466 LINC01565O15544 149 aa5.9□□□□□ -1.47
LIMCH1-207ENST00000508466 AREGP15514 252 aa5.9□□□□□ -1.47
LIMCH1-207ENST00000508466 GABRG2P18507 467 aa5.9□□□□□ -1.47
LIMCH1-207ENST00000508466 OR13A1Q8NGR1 328 aa5.9□□□□□ -1.47
LIMCH1-207ENST00000508466 ITLN1Q8WWA0 313 aa5.9□□□□□ -1.47
LIMCH1-207ENST00000508466 MRAP2Q96G30 205 aa5.9□□□□□ -1.47
LIMCH1-207ENST00000508466 GNG12Q9UBI6 72 aa5.9□□□□□ -1.47
LIMCH1-207ENST00000508466 SPTBN1Q01082 2364 aaKnown RBP5.89□□□□□ -1.47
LIMCH1-207ENST00000508466 PGPA6NDG6 321 aa5.89□□□□□ -1.47
LIMCH1-207ENST00000508466 PRR33A8MZF0 331 aa5.89□□□□□ -1.47
LIMCH1-207ENST00000508466 H3BVH4 76 aa5.89□□□□□ -1.47
LIMCH1-207ENST00000508466 MPDU1O75352 247 aa5.89□□□□□ -1.47
LIMCH1-207ENST00000508466 MOSP00540 346 aa5.89□□□□□ -1.47
LIMCH1-207ENST00000508466 SLC25A5P05141 298 aaKnown RBP5.89□□□□□ -1.47
LIMCH1-207ENST00000508466 HBBP68871 147 aa5.89□□□□□ -1.47
LIMCH1-207ENST00000508466 RNFT1Q5M7Z0 435 aa5.89□□□□□ -1.47
LIMCH1-207ENST00000508466 C10orf128Q5T292 105 aa5.89□□□□□ -1.47
LIMCH1-207ENST00000508466 FA2HQ7L5A8 372 aa5.89□□□□□ -1.47
LIMCH1-207ENST00000508466 WDR86Q86TI4 376 aa5.89□□□□□ -1.47
LIMCH1-207ENST00000508466 ZNF645Q8N7E2 425 aa5.89□□□□□ -1.47
LIMCH1-207ENST00000508466 TMEM178AQ8NBL3 297 aa5.89□□□□□ -1.47
LIMCH1-207ENST00000508466 IGF2BP2-AS1Q96M15 143 aa5.89□□□□□ -1.47
LIMCH1-207ENST00000508466 CITED1Q99966 193 aa5.89□□□□□ -1.47
LIMCH1-207ENST00000508466 ANAPC13Q9BS18 74 aa5.89□□□□□ -1.47
LIMCH1-207ENST00000508466 ZNF747Q9BV97 191 aa5.89□□□□□ -1.47
LIMCH1-207ENST00000508466 LINC00470Q9BZP3 86 aa5.89□□□□□ -1.47
LIMCH1-207ENST00000508466 AP5S1Q9NUS5 200 aa5.89□□□□□ -1.47
LIMCH1-207ENST00000508466 NCOR1O75376 2440 aa5.89□□□□□ -1.47
LIMCH1-207ENST00000508466 TRAV9-1A0A075B6T8 112 aa5.89□□□□□ -1.47
LIMCH1-207ENST00000508466 NPIPB13A6NJU9 1138 aa5.89□□□□□ -1.47
LIMCH1-207ENST00000508466 NPIPB5A8MRT5 1133 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms