RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 ACY3Q96HD9 319 aa11.37□□□□□ -0.59
RNF4-210ENST00000508235 SORL1Q92673 2214 aa11.36□□□□□ -0.59
RNF4-210ENST00000508235 TRAV14DV4A0A0A6YYC5 116 aa11.36□□□□□ -0.59
RNF4-210ENST00000508235 WI2-2373I1.2A0A1W2PRP0 233 aa11.36□□□□□ -0.59
RNF4-210ENST00000508235 H3BP45 60 aa11.36□□□□□ -0.59
RNF4-210ENST00000508235 FABP1P07148 127 aa11.36□□□□□ -0.59
RNF4-210ENST00000508235 IGLC1P0CG04 106 aa11.36□□□□□ -0.59
RNF4-210ENST00000508235 PVALBP20472 110 aaPredicted RBP11.36□□□□□ -0.59
RNF4-210ENST00000508235 CYCSP99999 105 aaKnown RBP11.36□□□□□ -0.59
RNF4-210ENST00000508235 CD300EQ496F6 205 aaPredicted RBP11.36□□□□□ -0.59
RNF4-210ENST00000508235 Q8WTZ3 238 aa11.36□□□□□ -0.59
RNF4-210ENST00000508235 PRR25Q96S07 402 aa11.36□□□□□ -0.59
RNF4-210ENST00000508235 RCL1Q9Y2P8 373 aaKnown RBP11.36□□□□□ -0.59
RNF4-210ENST00000508235 PUS1Q9Y606 427 aaKnown RBP eCLIP11.36□□□□□ -0.59
RNF4-210ENST00000508235 TRAV25A0A0B4J276 109 aa11.35□□□□□ -0.59
RNF4-210ENST00000508235 K7EIL1 84 aa11.35□□□□□ -0.59
RNF4-210ENST00000508235 GOSR2O14653 212 aa11.35□□□□□ -0.59
RNF4-210ENST00000508235 SSNA1O43805 119 aa11.35□□□□□ -0.59
RNF4-210ENST00000508235 SCAF4O95104 1147 aaKnown RBP11.35□□□□□ -0.59
RNF4-210ENST00000508235 IGKV1-17P01599 117 aa11.35□□□□□ -0.59
RNF4-210ENST00000508235 GAMTQ14353 236 aa11.35□□□□□ -0.59
RNF4-210ENST00000508235 TIGITQ495A1 244 aa11.35□□□□□ -0.59
RNF4-210ENST00000508235 DEFB121Q5J5C9 76 aa11.35□□□□□ -0.59
RNF4-210ENST00000508235 TOMM20LQ6UXN7 152 aa11.35□□□□□ -0.59
RNF4-210ENST00000508235 GTSCR1Q86UQ5 136 aa11.35□□□□□ -0.59
RNF4-210ENST00000508235 MLXQ9UH92 298 aa11.35□□□□□ -0.59
RNF4-210ENST00000508235 LSM5Q9Y4Y9 91 aaKnown RBP11.35□□□□□ -0.59
RNF4-210ENST00000508235 IGHV3OR16-8A0A075B7F1 116 aa11.34□□□□□ -0.59
RNF4-210ENST00000508235 C7orf66A4D0T2 115 aa11.34□□□□□ -0.59
RNF4-210ENST00000508235 ZFP92A6NM28 416 aa11.34□□□□□ -0.59
RNF4-210ENST00000508235 K7EPK0 472 aa11.34□□□□□ -0.59
RNF4-210ENST00000508235 PAX9P55771 341 aa11.34□□□□□ -0.59
RNF4-210ENST00000508235 RGS21Q2M5E4 152 aa11.34□□□□□ -0.59
RNF4-210ENST00000508235 LAMTOR1Q6IAA8 161 aa11.34□□□□□ -0.59
RNF4-210ENST00000508235 BTNL8Q6UX41 500 aa11.34□□□□□ -0.59
RNF4-210ENST00000508235 RBPMS2Q6ZRY4 209 aaKnown RBP11.34□□□□□ -0.59
RNF4-210ENST00000508235 OR10P1Q8NGE3 313 aa11.34□□□□□ -0.59
RNF4-210ENST00000508235 NARS2Q96I59 477 aaKnown RBP11.34□□□□□ -0.59
RNF4-210ENST00000508235 NMES1Q9C002 83 aa11.34□□□□□ -0.59
RNF4-210ENST00000508235 ZFAND3Q9H8U3 227 aa11.34□□□□□ -0.59
RNF4-210ENST00000508235 SMPXQ9UHP9 88 aa11.34□□□□□ -0.59
RNF4-210ENST00000508235 NOTCH1P46531 2555 aa11.34□□□□□ -0.59
RNF4-210ENST00000508235 IGHV7-4-1A0A0J9YVY3 117 aa11.33□□□□□ -0.6
RNF4-210ENST00000508235 A0A1W2PS18 150 aa11.33□□□□□ -0.6
RNF4-210ENST00000508235 PRSS46E5RG02 174 aa11.33□□□□□ -0.6
RNF4-210ENST00000508235 ZNF207O43670 478 aaKnown RBP11.33□□□□□ -0.6
RNF4-210ENST00000508235 TOMM40O96008 361 aa11.33□□□□□ -0.6
RNF4-210ENST00000508235 CD5P06127 495 aa11.33□□□□□ -0.6
RNF4-210ENST00000508235 RD3LP0DJH9 198 aa11.33□□□□□ -0.6
RNF4-210ENST00000508235 EDN2P20800 178 aa11.33□□□□□ -0.6
RNF4-210ENST00000508235 NPPCP23582 126 aa11.33□□□□□ -0.6
RNF4-210ENST00000508235 S100A10P60903 97 aa11.33□□□□□ -0.6
RNF4-210ENST00000508235 IL15RAQ13261 267 aa11.33□□□□□ -0.6
RNF4-210ENST00000508235 GUCA2BQ16661 112 aa11.33□□□□□ -0.6
RNF4-210ENST00000508235 TMEM14EPQ6UXP3 125 aa11.33□□□□□ -0.6
RNF4-210ENST00000508235 ZNF414Q96IQ9 312 aa11.33□□□□□ -0.6
RNF4-210ENST00000508235 METTL26Q96S19 204 aa11.33□□□□□ -0.6
RNF4-210ENST00000508235 TMEM231Q9H6L2 316 aa11.33□□□□□ -0.6
RNF4-210ENST00000508235 SMAD5-AS1Q9Y6J3 95 aa11.33□□□□□ -0.6
RNF4-210ENST00000508235 IZUMO1RA6ND01 250 aa11.32□□□□□ -0.6
RNF4-210ENST00000508235 FNDC10F2Z333 226 aa11.32□□□□□ -0.6
RNF4-210ENST00000508235 RLN2P04090 185 aa11.32□□□□□ -0.6
RNF4-210ENST00000508235 METTL15P1P0C7V9 234 aa11.32□□□□□ -0.6
RNF4-210ENST00000508235 BCAP31P51572 246 aa11.32□□□□□ -0.6
RNF4-210ENST00000508235 AKR1C1Q04828 323 aa11.32□□□□□ -0.6
RNF4-210ENST00000508235 OR8G2PQ6IF36 304 aa11.32□□□□□ -0.6
RNF4-210ENST00000508235 TMEM61Q8N0U2 210 aa11.32□□□□□ -0.6
RNF4-210ENST00000508235 TRGV9Q99603 122 aa11.32□□□□□ -0.6
RNF4-210ENST00000508235 RHPN1-AS1Q9BWJ2 59 aa11.32□□□□□ -0.6
RNF4-210ENST00000508235 LSM4Q9Y4Z0 139 aaKnown RBP11.32□□□□□ -0.6
RNF4-210ENST00000508235 PMS2P5A8MQ11 134 aa11.31□□□□□ -0.6
RNF4-210ENST00000508235 CHEK1O14757 476 aa11.31□□□□□ -0.6
RNF4-210ENST00000508235 CAV2P51636 162 aa11.31□□□□□ -0.6
RNF4-210ENST00000508235 DLK1P80370 383 aa11.31□□□□□ -0.6
RNF4-210ENST00000508235 RAB32Q13637 225 aa11.31□□□□□ -0.6
RNF4-210ENST00000508235 ACOT7LQ6ZUV0 252 aa11.31□□□□□ -0.6
RNF4-210ENST00000508235 TMEM144Q7Z5S9 345 aa11.31□□□□□ -0.6
RNF4-210ENST00000508235 THAP8Q8NA92 274 aa11.31□□□□□ -0.6
RNF4-210ENST00000508235 OR51G1Q8NGK1 321 aa11.31□□□□□ -0.6
RNF4-210ENST00000508235 SPAG8Q99932 426 aaPredicted RBP11.31□□□□□ -0.6
RNF4-210ENST00000508235 MGAT4CQ9UBM8 478 aa11.31□□□□□ -0.6
RNF4-210ENST00000508235 PFDN2Q9UHV9 154 aa11.31□□□□□ -0.6
RNF4-210ENST00000508235 ZNF785A8K8V0 405 aa11.3□□□□□ -0.6
RNF4-210ENST00000508235 TSPAN4O14817 238 aa11.3□□□□□ -0.6
RNF4-210ENST00000508235 SIX6O95475 246 aa11.3□□□□□ -0.6
RNF4-210ENST00000508235 CFDP00746 253 aaPredicted RBP11.3□□□□□ -0.6
RNF4-210ENST00000508235 IL4P05112 153 aa11.3□□□□□ -0.6
RNF4-210ENST00000508235 PET100P0DJ07 73 aa11.3□□□□□ -0.6
RNF4-210ENST00000508235 PSG1P11464 419 aa11.3□□□□□ -0.6
RNF4-210ENST00000508235 NUP62P37198 522 aaPredicted RBP11.3□□□□□ -0.6
RNF4-210ENST00000508235 WDR89Q96FK6 387 aaPredicted RBP11.3□□□□□ -0.6
RNF4-210ENST00000508235 GRAMD2BQ96HH9 432 aa11.3□□□□□ -0.6
RNF4-210ENST00000508235 GGACTQ9BVM4 153 aa11.3□□□□□ -0.6
RNF4-210ENST00000508235 LYRM2Q9NU23 88 aaPredicted RBP11.3□□□□□ -0.6
RNF4-210ENST00000508235 ALG5Q9Y673 324 aa11.3□□□□□ -0.6
RNF4-210ENST00000508235 IGKV1D-37A0A075B6S9 117 aa11.29□□□□□ -0.6
RNF4-210ENST00000508235 SMCO3A2RU48 225 aa11.29□□□□□ -0.6
RNF4-210ENST00000508235 DEDDO75618 318 aa11.29□□□□□ -0.6
RNF4-210ENST00000508235 HNRNPCP07910 306 aaKnown RBP eCLIP11.29□□□□□ -0.63e-8■□□□□ 8.8
RNF4-210ENST00000508235 CRYBB3P26998 211 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms