RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 GYPBP06028 91 aa5.16□□□□□ -1.58
CLCN3-204ENST00000504131 COX7CP15954 63 aa5.16□□□□□ -1.58
CLCN3-204ENST00000504131 CST6Q15828 149 aa5.16□□□□□ -1.58
CLCN3-204ENST00000504131 ZNF260Q3ZCT1 412 aa5.16□□□□□ -1.58
CLCN3-204ENST00000504131 LINC01620Q4KN68 170 aa5.16□□□□□ -1.58
CLCN3-204ENST00000504131 LAIR2Q6ISS4 152 aa5.16□□□□□ -1.58
CLCN3-204ENST00000504131 CDK5RAP2Q96SN8 1893 aa5.16□□□□□ -1.58
CLCN3-204ENST00000504131 SAA2-SAA4A0A096LPE2 208 aa5.15□□□□□ -1.58
CLCN3-204ENST00000504131 PPP1R3DO95685 299 aa5.15□□□□□ -1.58
CLCN3-204ENST00000504131 SAA4P35542 130 aa5.15□□□□□ -1.58
CLCN3-204ENST00000504131 SPEM2Q0P670 501 aa5.15□□□□□ -1.58
CLCN3-204ENST00000504131 OVCA2Q8WZ82 227 aa5.15□□□□□ -1.58
CLCN3-204ENST00000504131 CHCHD1Q96BP2 118 aaKnown RBP5.15□□□□□ -1.58
CLCN3-204ENST00000504131 UBE2E2Q96LR5 201 aa5.15□□□□□ -1.58
CLCN3-204ENST00000504131 LINC00479Q96M42 142 aa5.15□□□□□ -1.58
CLCN3-204ENST00000504131 MDFIQ99750 246 aa5.15□□□□□ -1.58
CLCN3-204ENST00000504131 MRPL32Q9BYC8 188 aaKnown RBP5.15□□□□□ -1.58
CLCN3-204ENST00000504131 PYGO1Q9Y3Y4 419 aa5.15□□□□□ -1.58
CLCN3-204ENST00000504131 SERP1Q9Y6X1 66 aa5.15□□□□□ -1.58
CLCN3-204ENST00000504131 ZNF638Q14966 1978 aaKnown RBP5.15□□□□□ -1.58
CLCN3-204ENST00000504131 TRAV12-3A0A0B4J271 114 aa5.15□□□□□ -1.58
CLCN3-204ENST00000504131 TMEM178BH3BS89 294 aa5.15□□□□□ -1.58
CLCN3-204ENST00000504131 IGHV4-34P06331 123 aa5.15□□□□□ -1.58
CLCN3-204ENST00000504131 ZNF138P52744 262 aa5.15□□□□□ -1.58
CLCN3-204ENST00000504131 SNRNP40Q96DI7 357 aaKnown RBP5.15□□□□□ -1.58
CLCN3-204ENST00000504131 AGMATQ9BSE5 352 aa5.15□□□□□ -1.58
CLCN3-204ENST00000504131 R3HDMLQ9H3Y0 253 aa5.15□□□□□ -1.58
CLCN3-204ENST00000504131 IGLL5B9A064 214 aa5.15□□□□□ -1.58
CLCN3-204ENST00000504131 C8orf82Q6P1X6 216 aaPredicted RBP5.15□□□□□ -1.58
CLCN3-204ENST00000504131 LINC01561Q8N1V8 128 aa5.15□□□□□ -1.58
CLCN3-204ENST00000504131 IGFBPL1Q8WX77 278 aa5.15□□□□□ -1.58
CLCN3-204ENST00000504131 CRYGNQ8WXF5 182 aa5.15□□□□□ -1.58
CLCN3-204ENST00000504131 DDB2Q92466 427 aa5.15□□□□□ -1.58
CLCN3-204ENST00000504131 LINC00526Q96FQ7 95 aa5.15□□□□□ -1.58
CLCN3-204ENST00000504131 RPRMQ9NS64 109 aa5.15□□□□□ -1.58
CLCN3-204ENST00000504131 TMEM202A6NGA9 273 aa5.15□□□□□ -1.59
CLCN3-204ENST00000504131 SMKR1H3BMG3 65 aa5.15□□□□□ -1.59
CLCN3-204ENST00000504131 TM4SF5O14894 197 aa5.15□□□□□ -1.59
CLCN3-204ENST00000504131 NDUFS5O43920 106 aa5.15□□□□□ -1.59
CLCN3-204ENST00000504131 IGHMP01871 453 aa5.15□□□□□ -1.59
CLCN3-204ENST00000504131 SP6Q3SY56 376 aa5.15□□□□□ -1.59
CLCN3-204ENST00000504131 OTORQ9NRC9 128 aa5.15□□□□□ -1.59
CLCN3-204ENST00000504131 CYTL1Q9NRR1 136 aa5.15□□□□□ -1.59
CLCN3-204ENST00000504131 HCSTQ9UBK5 93 aa5.15□□□□□ -1.59
CLCN3-204ENST00000504131 ANKRD31Q8N7Z5 1873 aa5.15□□□□□ -1.59
CLCN3-204ENST00000504131 ACYP1P07311 99 aa5.15□□□□□ -1.59
CLCN3-204ENST00000504131 FXYD3Q14802 87 aa5.15□□□□□ -1.59
CLCN3-204ENST00000504131 MIC13Q5XKP0 118 aa5.15□□□□□ -1.59
CLCN3-204ENST00000504131 CT62P0C5K7 136 aa5.14□□□□□ -1.59
CLCN3-204ENST00000504131 LOXL3P58215 753 aa5.14□□□□□ -1.59
CLCN3-204ENST00000504131 RIGQ13278 110 aa5.14□□□□□ -1.59
CLCN3-204ENST00000504131 C1orf61Q13536 156 aa5.14□□□□□ -1.59
CLCN3-204ENST00000504131 TMEM207Q6UWW9 146 aa5.14□□□□□ -1.59
CLCN3-204ENST00000504131 KLHDC9Q8NEP7 349 aa5.14□□□□□ -1.59
CLCN3-204ENST00000504131 IMUPQ9GZP8 106 aa5.14□□□□□ -1.59
CLCN3-204ENST00000504131 LSM2Q9Y333 95 aaKnown RBP5.14□□□□□ -1.59
CLCN3-204ENST00000504131 A0A087WWL8 130 aa5.14□□□□□ -1.59
CLCN3-204ENST00000504131 TRAV4A0A0B4J268 109 aa5.14□□□□□ -1.59
CLCN3-204ENST00000504131 CXCL12P48061 93 aa5.14□□□□□ -1.59
CLCN3-204ENST00000504131 ADAMTSL4Q6UY14 1074 aa5.14□□□□□ -1.59
CLCN3-204ENST00000504131 DNAJB12Q9NXW2 375 aaKnown RBP5.14□□□□□ -1.59
CLCN3-204ENST00000504131 KLK13Q9UKR3 277 aa5.14□□□□□ -1.59
CLCN3-204ENST00000504131 SIT1Q9Y3P8 196 aa5.14□□□□□ -1.59
CLCN3-204ENST00000504131 PLAC8L1A1L4L8 177 aa5.14□□□□□ -1.59
CLCN3-204ENST00000504131 HBBP68871 147 aa5.14□□□□□ -1.59
CLCN3-204ENST00000504131 TRAV12-2A0A075B6T6 113 aa5.14□□□□□ -1.59
CLCN3-204ENST00000504131 IGHG2P01859 326 aa5.14□□□□□ -1.59
CLCN3-204ENST00000504131 CCL20P78556 96 aa5.14□□□□□ -1.59
CLCN3-204ENST00000504131 ASPHD1Q5U4P2 390 aa5.14□□□□□ -1.59
CLCN3-204ENST00000504131 PQLC2Q6ZP29 291 aa5.14□□□□□ -1.59
CLCN3-204ENST00000504131 RPS4Y2Q8TD47 263 aa5.14□□□□□ -1.59
CLCN3-204ENST00000504131 AGPAT4-IT1Q9H0P7 198 aa5.14□□□□□ -1.59
CLCN3-204ENST00000504131 CALYQ9NYX4 217 aa5.14□□□□□ -1.59
CLCN3-204ENST00000504131 CCDC88CQ9P219 2028 aa5.13□□□□□ -1.59
CLCN3-204ENST00000504131 GRNP28799 593 aaKnown RBP5.13□□□□□ -1.59
CLCN3-204ENST00000504131 SLC25A30Q5SVS4 291 aa5.13□□□□□ -1.59
CLCN3-204ENST00000504131 LINC01545Q5VT33 79 aa5.13□□□□□ -1.59
CLCN3-204ENST00000504131 C1QL2Q7Z5L3 287 aa5.13□□□□□ -1.59
CLCN3-204ENST00000504131 PYGO2Q9BRQ0 406 aa5.13□□□□□ -1.59
CLCN3-204ENST00000504131 RNF115Q9Y4L5 304 aa5.13□□□□□ -1.59
CLCN3-204ENST00000504131 APOHP02749 345 aaPredicted RBP5.13□□□□□ -1.59
CLCN3-204ENST00000504131 CX3CL1P78423 397 aa5.13□□□□□ -1.59
CLCN3-204ENST00000504131 TMEM272A0A1B0GTI8 110 aa5.13□□□□□ -1.59
CLCN3-204ENST00000504131 E9PLN8 166 aa5.13□□□□□ -1.59
CLCN3-204ENST00000504131 J3QT63 122 aa5.13□□□□□ -1.59
CLCN3-204ENST00000504131 FKBP2P26885 142 aaKnown RBP5.13□□□□□ -1.59
CLCN3-204ENST00000504131 C12orf73Q69YU5 71 aa5.13□□□□□ -1.59
CLCN3-204ENST00000504131 SCN1AP35498 2009 aa5.13□□□□□ -1.59
CLCN3-204ENST00000504131 SERF2P84101 59 aa5.13□□□□□ -1.59
CLCN3-204ENST00000504131 PDPNQ86YL7 162 aa5.13□□□□□ -1.59
CLCN3-204ENST00000504131 IGF2BP2-AS1Q96M15 143 aa5.13□□□□□ -1.59
CLCN3-204ENST00000504131 TAS2R4Q9NYW5 299 aa5.13□□□□□ -1.59
CLCN3-204ENST00000504131 IGHV1-45A0A0A0MS14 117 aa5.13□□□□□ -1.59
CLCN3-204ENST00000504131 A0A1B0GTL3 188 aa5.13□□□□□ -1.59
CLCN3-204ENST00000504131 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.13□□□□□ -1.59
CLCN3-204ENST00000504131 TFF1P04155 84 aa5.13□□□□□ -1.59
CLCN3-204ENST00000504131 C12orf74Q32Q52 190 aa5.13□□□□□ -1.59
CLCN3-204ENST00000504131 IGHV1-24A0A0C4DH33 117 aa5.12□□□□□ -1.59
CLCN3-204ENST00000504131 ZNHIT1O43257 154 aa5.12□□□□□ -1.59
CLCN3-204ENST00000504131 UBE2BP63146 152 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms