RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 F11RQ9Y624 299 aaKnown RBP5.56□□□□□ -1.52
USP39-219ENST00000496047 NBPF19A0A087WUL8 3843 aa5.55□□□□□ -1.52
USP39-219ENST00000496047 TRAV30A0A087WSZ9 112 aa5.55□□□□□ -1.52
USP39-219ENST00000496047 LOC105371267A0A1B0GV96 52 aa5.55□□□□□ -1.52
USP39-219ENST00000496047 IGLC7A0M8Q6 106 aa5.55□□□□□ -1.52
USP39-219ENST00000496047 LY6LH3BQJ8 138 aa5.55□□□□□ -1.52
USP39-219ENST00000496047 NDUFA3O95167 84 aa5.55□□□□□ -1.52
USP39-219ENST00000496047 CRYGBP07316 175 aa5.55□□□□□ -1.52
USP39-219ENST00000496047 FAM106CPP0CH98 169 aa5.55□□□□□ -1.52
USP39-219ENST00000496047 CD99P14209 185 aa5.55□□□□□ -1.52
USP39-219ENST00000496047 AREGP15514 252 aa5.55□□□□□ -1.52
USP39-219ENST00000496047 TMEM11P17152 192 aa5.55□□□□□ -1.52
USP39-219ENST00000496047 RAB5AP20339 215 aa5.55□□□□□ -1.52
USP39-219ENST00000496047 AKR1C3P42330 323 aa5.55□□□□□ -1.52
USP39-219ENST00000496047 UBE2E1P51965 193 aa5.55□□□□□ -1.52
USP39-219ENST00000496047 RND2P52198 227 aa5.55□□□□□ -1.52
USP39-219ENST00000496047 DSCR9P59020 149 aa5.55□□□□□ -1.52
USP39-219ENST00000496047 CD81P60033 236 aa5.55□□□□□ -1.52
USP39-219ENST00000496047 UBE2L3P68036 154 aaKnown RBP5.55□□□□□ -1.52
USP39-219ENST00000496047 LCN2P80188 198 aa5.55□□□□□ -1.52
USP39-219ENST00000496047 WT1-ASQ06250 92 aa5.55□□□□□ -1.52
USP39-219ENST00000496047 C10orf55Q5SWW7 151 aa5.55□□□□□ -1.52
USP39-219ENST00000496047 Q8N7P7 452 aa5.55□□□□□ -1.52
USP39-219ENST00000496047 NPBQ8NG41 125 aa5.55□□□□□ -1.52
USP39-219ENST00000496047 HIST1H2BAQ96A08 127 aa5.55□□□□□ -1.52
USP39-219ENST00000496047 MALSU1Q96EH3 234 aa5.55□□□□□ -1.52
USP39-219ENST00000496047 TRGV9Q99603 122 aa5.55□□□□□ -1.52
USP39-219ENST00000496047 TCEAL7Q9BRU2 100 aa5.55□□□□□ -1.52
USP39-219ENST00000496047 BPESC1Q9GZL8 116 aa5.55□□□□□ -1.52
USP39-219ENST00000496047 TMPRSS5Q9H3S3 457 aa5.55□□□□□ -1.52
USP39-219ENST00000496047 DNAJC4Q9NNZ3 241 aa5.55□□□□□ -1.52
USP39-219ENST00000496047 DOK5Q9P104 306 aa5.55□□□□□ -1.52
USP39-219ENST00000496047 ZFHX3Q15911 3703 aa5.55□□□□□ -1.52
USP39-219ENST00000496047 FLNCQ14315 2725 aa5.54□□□□□ -1.52
USP39-219ENST00000496047 BSNQ9UPA5 3926 aa5.54□□□□□ -1.52
USP39-219ENST00000496047 NBASA2RRP1 2371 aa5.54□□□□□ -1.52
USP39-219ENST00000496047 COLCA2A8K830 154 aa5.54□□□□□ -1.52
USP39-219ENST00000496047 OVOL3O00110 214 aa5.54□□□□□ -1.52
USP39-219ENST00000496047 REG1AP05451 166 aa5.54□□□□□ -1.52
USP39-219ENST00000496047 COX6B1P14854 86 aa5.54□□□□□ -1.52
USP39-219ENST00000496047 HIST1H1BP16401 226 aaKnown RBP5.54□□□□□ -1.52
USP39-219ENST00000496047 SRP14P37108 136 aaKnown RBP5.54□□□□□ -1.52
USP39-219ENST00000496047 RPS10P46783 165 aaKnown RBP5.54□□□□□ -1.52
USP39-219ENST00000496047 ATP5G3P48201 142 aa5.54□□□□□ -1.52
USP39-219ENST00000496047 KLRD1Q13241 179 aa5.54□□□□□ -1.52
USP39-219ENST00000496047 HABP2Q14520 560 aaPredicted RBP5.54□□□□□ -1.52
USP39-219ENST00000496047 FXYD3Q14802 87 aa5.54□□□□□ -1.52
USP39-219ENST00000496047 C5orf64Q2M2E5 130 aa5.54□□□□□ -1.52
USP39-219ENST00000496047 GCSAMLQ5JQS6 135 aa5.54□□□□□ -1.52
USP39-219ENST00000496047 FAM24BQ8N5W8 94 aa5.54□□□□□ -1.52
USP39-219ENST00000496047 OR5AU1Q8NGC0 362 aa5.54□□□□□ -1.52
USP39-219ENST00000496047 OR4X1Q8NH49 305 aa5.54□□□□□ -1.52
USP39-219ENST00000496047 NPIPB3Q92617 1050 aa5.54□□□□□ -1.52
USP39-219ENST00000496047 ARPC1AQ92747 370 aa5.54□□□□□ -1.52
USP39-219ENST00000496047 ISOC2Q96AB3 205 aa5.54□□□□□ -1.52
USP39-219ENST00000496047 RASL11BQ9BPW5 248 aa5.54□□□□□ -1.52
USP39-219ENST00000496047 SIRPDQ9H106 197 aa5.54□□□□□ -1.52
USP39-219ENST00000496047 TNFRSF19Q9NS68 423 aa5.54□□□□□ -1.52
USP39-219ENST00000496047 LY96Q9Y6Y9 160 aa5.54□□□□□ -1.52
USP39-219ENST00000496047 ITPR2Q14571 2701 aa5.53□□□□□ -1.52
USP39-219ENST00000496047 A0A1W2PRE2 83 aa5.53□□□□□ -1.52
USP39-219ENST00000496047 NCBP2LA6PVI3 153 aaKnown RBP5.53□□□□□ -1.52
USP39-219ENST00000496047 C9JCJ5 164 aa5.53□□□□□ -1.52
USP39-219ENST00000496047 C19orf84I3L1E1 186 aa5.53□□□□□ -1.52
USP39-219ENST00000496047 CRYBA1P05813 215 aa5.53□□□□□ -1.52
USP39-219ENST00000496047 CNTFRP26992 372 aa5.53□□□□□ -1.52
USP39-219ENST00000496047 GALR1P47211 349 aa5.53□□□□□ -1.52
USP39-219ENST00000496047 ATP5J2P56134 94 aa5.53□□□□□ -1.52
USP39-219ENST00000496047 RPL23P62829 140 aaKnown RBP5.53□□□□□ -1.52
USP39-219ENST00000496047 TIGITQ495A1 244 aa5.53□□□□□ -1.52
USP39-219ENST00000496047 PVRIGQ6DKI7 326 aa5.53□□□□□ -1.52
USP39-219ENST00000496047 HCP5Q6MZN7 132 aa5.53□□□□□ -1.52
USP39-219ENST00000496047 MIR17HGQ75NE6 70 aa5.53□□□□□ -1.52
USP39-219ENST00000496047 C16orf82Q7Z2V1 217 aa5.53□□□□□ -1.52
USP39-219ENST00000496047 C1QL4Q86Z23 238 aa5.53□□□□□ -1.52
USP39-219ENST00000496047 TMEM116Q8NCL8 245 aa5.53□□□□□ -1.52
USP39-219ENST00000496047 CFHR4Q92496 578 aa5.53□□□□□ -1.52
USP39-219ENST00000496047 C11orf52Q96A22 123 aa5.53□□□□□ -1.52
USP39-219ENST00000496047 RBM14Q96PK6 669 aaKnown RBP5.53□□□□□ -1.52
USP39-219ENST00000496047 SSX3Q99909 188 aa5.53□□□□□ -1.52
USP39-219ENST00000496047 PAXXQ9BUH6 204 aa5.53□□□□□ -1.52
USP39-219ENST00000496047 SEPSECSQ9HD40 501 aaKnown RBP5.53□□□□□ -1.52
USP39-219ENST00000496047 GAR1Q9NY12 217 aaKnown RBP5.53□□□□□ -1.52
USP39-219ENST00000496047 DNHD1Q96M86 4753 aa5.52□□□□□ -1.53
USP39-219ENST00000496047 A0A1W2PRD5 423 aa5.52□□□□□ -1.53
USP39-219ENST00000496047 A0A1W2PRF3 423 aa5.52□□□□□ -1.53
USP39-219ENST00000496047 A0A1W2PRM7 423 aa5.52□□□□□ -1.53
USP39-219ENST00000496047 CGB1A6NKQ9 187 aa5.52□□□□□ -1.53
USP39-219ENST00000496047 NPIPB5A8MRT5 1133 aa5.52□□□□□ -1.53
USP39-219ENST00000496047 TEX22C9J3V5 150 aa5.52□□□□□ -1.53
USP39-219ENST00000496047 PPP5D1E7EU14 171 aa5.52□□□□□ -1.53
USP39-219ENST00000496047 H3BS24 57 aa5.52□□□□□ -1.53
USP39-219ENST00000496047 GNG7O60262 68 aa5.52□□□□□ -1.53
USP39-219ENST00000496047 HYPMO75409 117 aa5.52□□□□□ -1.53
USP39-219ENST00000496047 NDUFB4O95168 129 aa5.52□□□□□ -1.53
USP39-219ENST00000496047 S100A9P06702 114 aaKnown RBP5.52□□□□□ -1.53
USP39-219ENST00000496047 CRYGCP07315 174 aa5.52□□□□□ -1.53
USP39-219ENST00000496047 CTRB1P17538 263 aa5.52□□□□□ -1.53
USP39-219ENST00000496047 CNN1P51911 297 aaKnown RBP5.52□□□□□ -1.53
USP39-219ENST00000496047 MFAP4P55083 255 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms