RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 SLC16A13Q7RTY0 426 aa12□□□□□ -0.49
LIME1-209ENST00000494776 OR1S2Q8NGQ3 325 aa12□□□□□ -0.49
LIME1-209ENST00000494776 SMPXQ9UHP9 88 aa12□□□□□ -0.49
LIME1-209ENST00000494776 IGHV3-49A0A0A0MS15 119 aa11.99□□□□□ -0.49
LIME1-209ENST00000494776 SCGB1D2O95969 90 aa11.99□□□□□ -0.49
LIME1-209ENST00000494776 CD7P09564 240 aa11.99□□□□□ -0.49
LIME1-209ENST00000494776 OR10J1P30954 320 aa11.99□□□□□ -0.49
LIME1-209ENST00000494776 NKX2-1P43699 371 aaPredicted RBP11.99□□□□□ -0.49
LIME1-209ENST00000494776 IAH1Q2TAA2 248 aaPredicted RBP11.99□□□□□ -0.49
LIME1-209ENST00000494776 ZNF431Q8TF32 576 aaPredicted RBP11.99□□□□□ -0.49
LIME1-209ENST00000494776 NPIPB3Q92617 1050 aa11.99□□□□□ -0.49
LIME1-209ENST00000494776 SEC22CQ9BRL7 303 aa11.99□□□□□ -0.49
LIME1-209ENST00000494776 RHPN1-AS1Q9BWJ2 59 aa11.99□□□□□ -0.49
LIME1-209ENST00000494776 GSKIPQ9P0R6 139 aa11.99□□□□□ -0.49
LIME1-209ENST00000494776 IGHV3OR16-13A0A075B7E8 117 aa11.98□□□□□ -0.49
LIME1-209ENST00000494776 IGHV3-74A0A0B4J1X5 117 aa11.98□□□□□ -0.49
LIME1-209ENST00000494776 CHEK1O14757 476 aa11.98□□□□□ -0.49
LIME1-209ENST00000494776 SPANXN5Q5MJ07 72 aa11.98□□□□□ -0.49
LIME1-209ENST00000494776 Q8WTZ3 238 aa11.98□□□□□ -0.49
LIME1-209ENST00000494776 ZNF414Q96IQ9 312 aa11.98□□□□□ -0.49
LIME1-209ENST00000494776 SLC35E1Q96K37 410 aa11.98□□□□□ -0.49
LIME1-209ENST00000494776 FAM25EA8MYX2 175 aa11.97□□□□□ -0.49
LIME1-209ENST00000494776 OR11H12B2RN74 326 aa11.97□□□□□ -0.49
LIME1-209ENST00000494776 IGKV1-17P01599 117 aa11.97□□□□□ -0.49
LIME1-209ENST00000494776 IGLC1P0CG04 106 aa11.97□□□□□ -0.49
LIME1-209ENST00000494776 NPPCP23582 126 aa11.97□□□□□ -0.49
LIME1-209ENST00000494776 GPX4P36969 197 aaPredicted RBP11.97□□□□□ -0.49
LIME1-209ENST00000494776 DEFA1P59665 94 aa11.97□□□□□ -0.49
LIME1-209ENST00000494776 DEFA3P59666 94 aa11.97□□□□□ -0.49
LIME1-209ENST00000494776 POLR2GP62487 172 aaKnown RBP eCLIP11.97□□□□□ -0.49
LIME1-209ENST00000494776 ID3Q02535 119 aa11.97□□□□□ -0.49
LIME1-209ENST00000494776 SBSPONQ8IVN8 264 aa11.97□□□□□ -0.49
LIME1-209ENST00000494776 C12orf45Q8N5I9 185 aaPredicted RBP11.97□□□□□ -0.49
LIME1-209ENST00000494776 OR4D5Q8NGN0 318 aa11.97□□□□□ -0.49
LIME1-209ENST00000494776 NARS2Q96I59 477 aaKnown RBP11.97□□□□□ -0.49
LIME1-209ENST00000494776 METTL26Q96S19 204 aa11.97□□□□□ -0.49
LIME1-209ENST00000494776 SPAG8Q99932 426 aaPredicted RBP11.97□□□□□ -0.49
LIME1-209ENST00000494776 ZFAND3Q9H8U3 227 aa11.97□□□□□ -0.49
LIME1-209ENST00000494776 STRAPQ9Y3F4 350 aaKnown RBP11.97□□□□□ -0.49
LIME1-209ENST00000494776 C5orf51A6NDU8 294 aa11.96□□□□□ -0.49
LIME1-209ENST00000494776 A8MZ25 164 aa11.96□□□□□ -0.49
LIME1-209ENST00000494776 H3BP45 60 aa11.96□□□□□ -0.49
LIME1-209ENST00000494776 CCSO14618 274 aa11.96□□□□□ -0.49
LIME1-209ENST00000494776 TSPAN4O14817 238 aa11.96□□□□□ -0.49
LIME1-209ENST00000494776 SSSCA1O60232 199 aa11.96□□□□□ -0.49
LIME1-209ENST00000494776 YPEL3P61236 119 aaPredicted RBP11.96□□□□□ -0.49
LIME1-209ENST00000494776 IFITM3Q01628 133 aa11.96□□□□□ -0.49
LIME1-209ENST00000494776 DEFB125Q8N687 156 aa11.96□□□□□ -0.49
LIME1-209ENST00000494776 ZBTB8BQ8NAP8 495 aaPredicted RBP11.96□□□□□ -0.49
LIME1-209ENST00000494776 RNF2Q99496 336 aa11.96□□□□□ -0.49
LIME1-209ENST00000494776 TMEM231Q9H6L2 316 aa11.96□□□□□ -0.49
LIME1-209ENST00000494776 C19orf73Q9NVV2 129 aa11.96□□□□□ -0.49
LIME1-209ENST00000494776 PSENENQ9NZ42 101 aa11.96□□□□□ -0.49
LIME1-209ENST00000494776 IGKV3-7A0A075B6H7 116 aa11.95□□□□□ -0.5
LIME1-209ENST00000494776 IGHV3-66A0A0C4DH42 116 aa11.95□□□□□ -0.5
LIME1-209ENST00000494776 A0A1W2PS18 150 aa11.95□□□□□ -0.5
LIME1-209ENST00000494776 ZFP92A6NM28 416 aa11.95□□□□□ -0.5
LIME1-209ENST00000494776 RD3LP0DJH9 198 aa11.95□□□□□ -0.5
LIME1-209ENST00000494776 RPL11P62913 178 aaKnown RBP11.95□□□□□ -0.5
LIME1-209ENST00000494776 GAMTQ14353 236 aa11.95□□□□□ -0.5
LIME1-209ENST00000494776 ST8SIA2Q92186 375 aa11.95□□□□□ -0.5
LIME1-209ENST00000494776 ZMAT4Q9H898 229 aa11.95□□□□□ -0.5
LIME1-209ENST00000494776 GPN1Q9HCN4 374 aaPredicted RBP11.95□□□□□ -0.5
LIME1-209ENST00000494776 OR4C46A6NHA9 309 aa11.94□□□□□ -0.5
LIME1-209ENST00000494776 APOHP02749 345 aaPredicted RBP11.94□□□□□ -0.5
LIME1-209ENST00000494776 CD5P06127 495 aa11.94□□□□□ -0.5
LIME1-209ENST00000494776 TCF24Q7RTU0 167 aa11.94□□□□□ -0.5
LIME1-209ENST00000494776 WFDC10AQ9H1F0 79 aa11.94□□□□□ -0.5
LIME1-209ENST00000494776 SRD5A3Q9H8P0 318 aa11.94□□□□□ -0.5
LIME1-209ENST00000494776 U3KQK5 164 aa11.94□□□□□ -0.5
LIME1-209ENST00000494776 TOMM40O96008 361 aa11.93□□□□□ -0.5
LIME1-209ENST00000494776 IL4P05112 153 aa11.93□□□□□ -0.5
LIME1-209ENST00000494776 IL5P05113 134 aa11.93□□□□□ -0.5
LIME1-209ENST00000494776 FABP1P07148 127 aa11.93□□□□□ -0.5
LIME1-209ENST00000494776 TFPI2P48307 235 aa11.93□□□□□ -0.5
LIME1-209ENST00000494776 PAFAH1B2P68402 229 aa11.93□□□□□ -0.5
LIME1-209ENST00000494776 NRARPQ7Z6K4 114 aa11.93□□□□□ -0.5
LIME1-209ENST00000494776 GRAMD2BQ96HH9 432 aa11.93□□□□□ -0.5
LIME1-209ENST00000494776 SMIM8Q96KF7 97 aa11.93□□□□□ -0.5
LIME1-209ENST00000494776 RAB40CQ96S21 281 aa11.93□□□□□ -0.5
LIME1-209ENST00000494776 VSIRQ9H7M9 311 aa11.93□□□□□ -0.5
LIME1-209ENST00000494776 L7N2F9 121 aa11.92□□□□□ -0.5
LIME1-209ENST00000494776 DNASE2O00115 360 aaPredicted RBP11.92□□□□□ -0.5
LIME1-209ENST00000494776 PSG1P11464 419 aa11.92□□□□□ -0.5
LIME1-209ENST00000494776 CRYBB3P26998 211 aa11.92□□□□□ -0.5
LIME1-209ENST00000494776 VAMP2P63027 116 aa11.92□□□□□ -0.5
LIME1-209ENST00000494776 GSG1LQ6UXU4 331 aa11.92□□□□□ -0.5
LIME1-209ENST00000494776 GBGT1Q8N5D6 347 aa11.92□□□□□ -0.5
LIME1-209ENST00000494776 OR51G1Q8NGK1 321 aa11.92□□□□□ -0.5
LIME1-209ENST00000494776 UBQLN2Q9UHD9 624 aa11.92□□□□□ -0.5
LIME1-209ENST00000494776 SMCO3A2RU48 225 aa11.91□□□□□ -0.5
LIME1-209ENST00000494776 INMT-MINDY4F8WBC2 141 aa11.91□□□□□ -0.5
LIME1-209ENST00000494776 DFFBO76075 338 aa11.91□□□□□ -0.5
LIME1-209ENST00000494776 MBPP02686 304 aaPredicted RBP11.91□□□□□ -0.5
LIME1-209ENST00000494776 HNRNPCP07910 306 aaKnown RBP eCLIP11.91□□□□□ -0.5
LIME1-209ENST00000494776 AKR1C1Q04828 323 aa11.91□□□□□ -0.5
LIME1-209ENST00000494776 OR8G2PQ6IF36 304 aa11.91□□□□□ -0.5
LIME1-209ENST00000494776 WFDC3Q8IUB2 231 aa11.91□□□□□ -0.5
LIME1-209ENST00000494776 C2orf50Q96LR7 162 aa11.91□□□□□ -0.5
LIME1-209ENST00000494776 PBDC1Q9BVG4 233 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 132.9 ms