RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 TXN2Q99757 166 aa12.12□□□□□ -0.47
HPS4-216ENST00000493455 GAR1Q9NY12 217 aaKnown RBP12.12□□□□□ -0.47
HPS4-216ENST00000493455 UBE2L5PA0A1B0GUS4 154 aa12.11□□□□□ -0.47
HPS4-216ENST00000493455 G3V3Q6 166 aa12.11□□□□□ -0.47
HPS4-216ENST00000493455 ARPC5O15511 151 aa12.11□□□□□ -0.47
HPS4-216ENST00000493455 YIF1AO95070 293 aa12.11□□□□□ -0.47
HPS4-216ENST00000493455 ZP3P21754 424 aa12.11□□□□□ -0.47
HPS4-216ENST00000493455 CD300CQ08708 224 aa12.11□□□□□ -0.47
HPS4-216ENST00000493455 FAM209BQ5JX69 171 aa12.11□□□□□ -0.47
HPS4-216ENST00000493455 INO80EQ8NBZ0 244 aaPredicted RBP12.11□□□□□ -0.47
HPS4-216ENST00000493455 SPATA3Q8NHX4 192 aa12.11□□□□□ -0.47
HPS4-216ENST00000493455 CACNG8Q8WXS5 425 aa12.11□□□□□ -0.47
HPS4-216ENST00000493455 HSPB11Q9Y547 144 aa12.11□□□□□ -0.47
HPS4-216ENST00000493455 ZNF320A2RRD8 509 aa12.1□□□□□ -0.47
HPS4-216ENST00000493455 CTSGP08311 255 aa12.1□□□□□ -0.47
HPS4-216ENST00000493455 S100A11P31949 105 aa12.1□□□□□ -0.47
HPS4-216ENST00000493455 ADMP35318 185 aa12.1□□□□□ -0.47
HPS4-216ENST00000493455 SYNJ2BPP57105 145 aa12.1□□□□□ -0.47
HPS4-216ENST00000493455 BAXQ07812 192 aa12.1□□□□□ -0.47
HPS4-216ENST00000493455 SPSB3Q6PJ21 355 aa12.1□□□□□ -0.47
HPS4-216ENST00000493455 DLX4Q92988 240 aaPredicted RBP12.1□□□□□ -0.47
HPS4-216ENST00000493455 C20orf24Q9BUV8 137 aa12.1□□□□□ -0.47
HPS4-216ENST00000493455 UQCC1Q9NVA1 299 aa12.1□□□□□ -0.47
HPS4-216ENST00000493455 TRAV30A0A087WSZ9 112 aa12.09□□□□□ -0.47
HPS4-216ENST00000493455 SCAF4O95104 1147 aaKnown RBP12.09□□□□□ -0.47
HPS4-216ENST00000493455 OR2F1Q13607 317 aa12.09□□□□□ -0.47
HPS4-216ENST00000493455 TMEM116Q8NCL8 245 aa12.09□□□□□ -0.47
HPS4-216ENST00000493455 TMEM147Q9BVK8 224 aa12.09□□□□□ -0.47
HPS4-216ENST00000493455 ZNF207O43670 478 aaKnown RBP12.08□□□□□ -0.48
HPS4-216ENST00000493455 IGLC1P0CG04 106 aa12.08□□□□□ -0.48
HPS4-216ENST00000493455 CD33P20138 364 aa12.08□□□□□ -0.48
HPS4-216ENST00000493455 FCGR2BP31994 310 aaPredicted RBP12.08□□□□□ -0.48
HPS4-216ENST00000493455 RELQ04864 619 aaPredicted RBP12.08□□□□□ -0.48
HPS4-216ENST00000493455 FHL3Q13643 280 aa12.08□□□□□ -0.48
HPS4-216ENST00000493455 FAM106AQ4KMX7 169 aa12.08□□□□□ -0.48
HPS4-216ENST00000493455 TCTE3Q8IZS6 198 aa12.08□□□□□ -0.48
HPS4-216ENST00000493455 OR11H4Q8NGC9 324 aa12.08□□□□□ -0.48
HPS4-216ENST00000493455 NPVFQ9HCQ7 196 aa12.08□□□□□ -0.48
HPS4-216ENST00000493455 TNFSF18Q9UNG2 199 aa12.08□□□□□ -0.48
HPS4-216ENST00000493455 IGKV1OR2-108A0A075B7D4 117 aa12.07□□□□□ -0.48
HPS4-216ENST00000493455 OVOL1O14753 267 aa12.07□□□□□ -0.48
HPS4-216ENST00000493455 IGKV1-17P01599 117 aa12.07□□□□□ -0.48
HPS4-216ENST00000493455 FGF7P21781 194 aa12.07□□□□□ -0.48
HPS4-216ENST00000493455 ZNF90Q03938 601 aa12.07□□□□□ -0.48
HPS4-216ENST00000493455 ATP6V1FQ16864 119 aa12.07□□□□□ -0.48
HPS4-216ENST00000493455 TREML4Q6UXN2 200 aa12.07□□□□□ -0.48
HPS4-216ENST00000493455 ZNF600Q6ZNG1 722 aa12.07□□□□□ -0.48
HPS4-216ENST00000493455 TMEM144Q7Z5S9 345 aa12.07□□□□□ -0.48
HPS4-216ENST00000493455 C1QL4Q86Z23 238 aa12.07□□□□□ -0.48
HPS4-216ENST00000493455 LINC00482Q8N8I6 264 aa12.07□□□□□ -0.48
HPS4-216ENST00000493455 RCC1LQ96I51 464 aaKnown RBP12.07□□□□□ -0.48
HPS4-216ENST00000493455 AQP10Q96PS8 301 aa12.07□□□□□ -0.48
HPS4-216ENST00000493455 ATP6V0BQ99437 205 aa12.07□□□□□ -0.48
HPS4-216ENST00000493455 ATP5SQ99766 215 aa12.07□□□□□ -0.48
HPS4-216ENST00000493455 GGACTQ9BVM4 153 aa12.07□□□□□ -0.48
HPS4-216ENST00000493455 MFFQ9GZY8 342 aa12.07□□□□□ -0.48
HPS4-216ENST00000493455 FBXL17Q9UF56 701 aa12.07□□□□□ -0.48
HPS4-216ENST00000493455 PUS1Q9Y606 427 aaKnown RBP eCLIP12.07□□□□□ -0.48
HPS4-216ENST00000493455 IGKV1D-37A0A075B6S9 117 aa12.06□□□□□ -0.48
HPS4-216ENST00000493455 RNF222A6NCQ9 220 aa12.06□□□□□ -0.48
HPS4-216ENST00000493455 GATA2P23769 480 aaPredicted RBP12.06□□□□□ -0.48
HPS4-216ENST00000493455 TEPPQ6URK8 271 aa12.06□□□□□ -0.48
HPS4-216ENST00000493455 UNQ9165/PRO28630Q6UXU0 137 aa12.06□□□□□ -0.48
HPS4-216ENST00000493455 THAP8Q8NA92 274 aa12.06□□□□□ -0.48
HPS4-216ENST00000493455 PBDC1Q9BVG4 233 aa12.06□□□□□ -0.48
HPS4-216ENST00000493455 SELENOKQ9Y6D0 94 aa12.06□□□□□ -0.48
HPS4-216ENST00000493455 NDUFA4O00483 81 aa12.05□□□□□ -0.48
HPS4-216ENST00000493455 PFDN1O60925 122 aa12.05□□□□□ -0.48
HPS4-216ENST00000493455 DFFBO76075 338 aa12.05□□□□□ -0.48
HPS4-216ENST00000493455 IFNA5P01569 189 aa12.05□□□□□ -0.48
HPS4-216ENST00000493455 RD3LP0DJH9 198 aa12.05□□□□□ -0.48
HPS4-216ENST00000493455 EDN2P20800 178 aa12.05□□□□□ -0.48
HPS4-216ENST00000493455 EIF2B2P49770 351 aaKnown RBP12.05□□□□□ -0.48
HPS4-216ENST00000493455 LYZP61626 148 aa12.05□□□□□ -0.48
HPS4-216ENST00000493455 KLF5Q13887 457 aaPredicted RBP12.05□□□□□ -0.48
HPS4-216ENST00000493455 BTNL8Q6UX41 500 aa12.05□□□□□ -0.48
HPS4-216ENST00000493455 Q8WTZ3 238 aa12.05□□□□□ -0.48
HPS4-216ENST00000493455 TRGV9Q99603 122 aa12.05□□□□□ -0.48
HPS4-216ENST00000493455 WFDC1Q9HC57 220 aa12.05□□□□□ -0.48
HPS4-216ENST00000493455 IGHV3-49A0A0A0MS15 119 aa12.04□□□□□ -0.48
HPS4-216ENST00000493455 FNDC10F2Z333 226 aa12.04□□□□□ -0.48
HPS4-216ENST00000493455 TOMM40O96008 361 aa12.04□□□□□ -0.48
HPS4-216ENST00000493455 C1QBP02746 253 aa12.04□□□□□ -0.48
HPS4-216ENST00000493455 IL4P05112 153 aa12.04□□□□□ -0.48
HPS4-216ENST00000493455 FABP1P07148 127 aa12.04□□□□□ -0.48
HPS4-216ENST00000493455 PSG1P11464 419 aa12.04□□□□□ -0.48
HPS4-216ENST00000493455 YPEL3P61236 119 aaPredicted RBP12.04□□□□□ -0.48
HPS4-216ENST00000493455 ZFP69Q49AA0 526 aa12.04□□□□□ -0.48
HPS4-216ENST00000493455 TM4SF20Q53R12 229 aa12.04□□□□□ -0.48
HPS4-216ENST00000493455 TOMM20LQ6UXN7 152 aa12.04□□□□□ -0.48
HPS4-216ENST00000493455 CYP2G1PQ6ZSU1 146 aa12.04□□□□□ -0.48
HPS4-216ENST00000493455 GPHB5Q86YW7 130 aa12.04□□□□□ -0.48
HPS4-216ENST00000493455 OR51G1Q8NGK1 321 aa12.04□□□□□ -0.48
HPS4-216ENST00000493455 TMEM190Q8WZ59 177 aa12.04□□□□□ -0.48
HPS4-216ENST00000493455 MGST2Q99735 147 aa12.04□□□□□ -0.48
HPS4-216ENST00000493455 NEURL2Q9BR09 285 aa12.04□□□□□ -0.48
HPS4-216ENST00000493455 PEMTQ9UBM1 199 aa12.04□□□□□ -0.48
HPS4-216ENST00000493455 WDR83OSQ9Y284 106 aa12.04□□□□□ -0.48
HPS4-216ENST00000493455 IGHV3OR16-13A0A075B7E8 117 aa12.03□□□□□ -0.48
HPS4-216ENST00000493455 IGHV3-74A0A0B4J1X5 117 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms