RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 RBMS2Q15434 407 aaKnown RBP8.77□□□□□ -1.01
CCHCR1-215ENST00000488920 NMSQ5H8A3 153 aa8.77□□□□□ -1.01
CCHCR1-215ENST00000488920 PRSS54Q6PEW0 395 aa8.77□□□□□ -1.01
CCHCR1-215ENST00000488920 LYZL2Q7Z4W2 148 aa8.77□□□□□ -1.01
CCHCR1-215ENST00000488920 SLC24A4Q8NFF2 622 aa8.77□□□□□ -1.01
CCHCR1-215ENST00000488920 RNASEH2CQ8TDP1 164 aaKnown RBP8.77□□□□□ -1.01
CCHCR1-215ENST00000488920 TMEM170AQ8WVE7 144 aa8.77□□□□□ -1.01
CCHCR1-215ENST00000488920 IL22RA2Q969J5 263 aa8.77□□□□□ -1.01
CCHCR1-215ENST00000488920 TRAV2A0A0B4J234 112 aa8.76□□□□□ -1.01
CCHCR1-215ENST00000488920 IGLC1P0CG04 106 aa8.76□□□□□ -1.01
CCHCR1-215ENST00000488920 SLC25A4P12235 298 aa8.76□□□□□ -1.01
CCHCR1-215ENST00000488920 OR10J1P30954 320 aa8.76□□□□□ -1.01
CCHCR1-215ENST00000488920 P2RY1P47900 373 aa8.76□□□□□ -1.01
CCHCR1-215ENST00000488920 SUPT4H1P63272 117 aaKnown RBP8.76□□□□□ -1.01
CCHCR1-215ENST00000488920 PYDC2Q56P42 97 aa8.76□□□□□ -1.01
CCHCR1-215ENST00000488920 STXBP6Q8NFX7 210 aa8.76□□□□□ -1.01
CCHCR1-215ENST00000488920 OR1S2Q8NGQ3 325 aa8.76□□□□□ -1.01
CCHCR1-215ENST00000488920 Q8WTZ3 238 aa8.76□□□□□ -1.01
CCHCR1-215ENST00000488920 NPIPB3Q92617 1050 aa8.76□□□□□ -1.01
CCHCR1-215ENST00000488920 RARRES2Q99969 163 aa8.76□□□□□ -1.01
CCHCR1-215ENST00000488920 EPPK1P58107 5090 aaKnown RBP8.75□□□□□ -1.01
CCHCR1-215ENST00000488920 CA1P00915 261 aaPredicted RBP8.75□□□□□ -1.01
CCHCR1-215ENST00000488920 IFNA10P01566 189 aa8.75□□□□□ -1.01
CCHCR1-215ENST00000488920 NPY1RP25929 384 aa8.75□□□□□ -1.01
CCHCR1-215ENST00000488920 CCR6P51684 374 aa8.75□□□□□ -1.01
CCHCR1-215ENST00000488920 YPEL3P61236 119 aaPredicted RBP8.75□□□□□ -1.01
CCHCR1-215ENST00000488920 KLF9Q13886 244 aaPredicted RBP8.75□□□□□ -1.01
CCHCR1-215ENST00000488920 SMCO1Q147U7 214 aa8.75□□□□□ -1.01
CCHCR1-215ENST00000488920 CEMP1Q6PRD7 247 aaPredicted RBP8.75□□□□□ -1.01
CCHCR1-215ENST00000488920 TMED4Q7Z7H5 227 aa8.75□□□□□ -1.01
CCHCR1-215ENST00000488920 LGI3Q8N145 548 aa8.75□□□□□ -1.01
CCHCR1-215ENST00000488920 TMEM217Q8N7C4 229 aa8.75□□□□□ -1.01
CCHCR1-215ENST00000488920 OR11H2Q8NH07 326 aa8.75□□□□□ -1.01
CCHCR1-215ENST00000488920 GATAD1Q8WUU5 269 aa8.75□□□□□ -1.01
CCHCR1-215ENST00000488920 ACY3Q96HD9 319 aa8.75□□□□□ -1.01
CCHCR1-215ENST00000488920 NARS2Q96I59 477 aaKnown RBP8.75□□□□□ -1.01
CCHCR1-215ENST00000488920 RBKSQ9H477 322 aa8.75□□□□□ -1.01
CCHCR1-215ENST00000488920 CACFD1Q9UGQ2 172 aa8.75□□□□□ -1.01
CCHCR1-215ENST00000488920 A0A0B4J2A0 478 aa8.74□□□□□ -1.01
CCHCR1-215ENST00000488920 NUPR2A6NF83 97 aa8.74□□□□□ -1.01
CCHCR1-215ENST00000488920 K7EQG2 157 aa8.74□□□□□ -1.01
CCHCR1-215ENST00000488920 ZNF688P0C7X2 276 aa8.74□□□□□ -1.01
CCHCR1-215ENST00000488920 ANXA3P12429 323 aa8.74□□□□□ -1.01
CCHCR1-215ENST00000488920 ATF4P18848 351 aaPredicted RBP8.74□□□□□ -1.01
CCHCR1-215ENST00000488920 ETFRF1Q6IPR1 90 aa8.74□□□□□ -1.01
CCHCR1-215ENST00000488920 NOXA1Q86UR1 476 aa8.74□□□□□ -1.01
CCHCR1-215ENST00000488920 STHQ8IWL8 128 aa8.74□□□□□ -1.01
CCHCR1-215ENST00000488920 DTD1Q8TEA8 209 aa8.74□□□□□ -1.01
CCHCR1-215ENST00000488920 GRAMD2BQ96HH9 432 aa8.74□□□□□ -1.01
CCHCR1-215ENST00000488920 HSPB7Q9UBY9 170 aa8.74□□□□□ -1.01
CCHCR1-215ENST00000488920 SHPKQ9UHJ6 478 aa8.74□□□□□ -1.01
CCHCR1-215ENST00000488920 U3KQ87 197 aa8.74□□□□□ -1.01
CCHCR1-215ENST00000488920 U3KQE9 123 aa8.74□□□□□ -1.01
CCHCR1-215ENST00000488920 PLECQ15149 4684 aaKnown RBP8.74□□□□□ -1.01
CCHCR1-215ENST00000488920 CCDC160A6NGH7 325 aa8.73□□□□□ -1.01
CCHCR1-215ENST00000488920 KNCNA6PVL3 124 aa8.73□□□□□ -1.01
CCHCR1-215ENST00000488920 DEFB4AO15263 64 aa8.73□□□□□ -1.01
CCHCR1-215ENST00000488920 LY6G6CO95867 125 aa8.73□□□□□ -1.01
CCHCR1-215ENST00000488920 IL4P05112 153 aa8.73□□□□□ -1.01
CCHCR1-215ENST00000488920 HNRNPCP07910 306 aaKnown RBP eCLIP8.73□□□□□ -1.01
CCHCR1-215ENST00000488920 RD3LP0DJH9 198 aa8.73□□□□□ -1.01
CCHCR1-215ENST00000488920 FAUP35544 74 aaKnown RBP8.73□□□□□ -1.01
CCHCR1-215ENST00000488920 USF2Q15853 346 aaPredicted RBP8.73□□□□□ -1.01
CCHCR1-215ENST00000488920 C16orf54Q6UWD8 224 aa8.73□□□□□ -1.01
CCHCR1-215ENST00000488920 TOMM5Q8N4H5 51 aa8.73□□□□□ -1.01
CCHCR1-215ENST00000488920 OR1S1Q8NH92 325 aa8.73□□□□□ -1.01
CCHCR1-215ENST00000488920 DCANP1Q8TF63 244 aa8.73□□□□□ -1.01
CCHCR1-215ENST00000488920 TRIM63Q969Q1 353 aa8.73□□□□□ -1.01
CCHCR1-215ENST00000488920 IFNA4P05014 189 aa8.72□□□□□ -1.01
CCHCR1-215ENST00000488920 EIF2B2P49770 351 aaKnown RBP8.72□□□□□ -1.01
CCHCR1-215ENST00000488920 AP3S2P59780 193 aa8.72□□□□□ -1.01
CCHCR1-215ENST00000488920 SRPXP78539 464 aa8.72□□□□□ -1.01
CCHCR1-215ENST00000488920 DHRS2Q13268 280 aa8.72□□□□□ -1.01
CCHCR1-215ENST00000488920 ZNF79Q15937 498 aa8.72□□□□□ -1.01
CCHCR1-215ENST00000488920 ACTL10Q5JWF8 245 aa8.72□□□□□ -1.01
CCHCR1-215ENST00000488920 PHLDA1Q8WV24 401 aaPredicted RBP8.72□□□□□ -1.01
CCHCR1-215ENST00000488920 GLMPQ8WWB7 406 aa8.72□□□□□ -1.01
CCHCR1-215ENST00000488920 LINC00476Q8WZB0 136 aa8.72□□□□□ -1.01
CCHCR1-215ENST00000488920 KLK5Q9Y337 293 aaPredicted RBP8.72□□□□□ -1.01
CCHCR1-215ENST00000488920 V9GYH0 126 aa8.72□□□□□ -1.01
CCHCR1-215ENST00000488920 ALMS1Q8TCU4 4167 aa8.72□□□□□ -1.01
CCHCR1-215ENST00000488920 BIRC6Q9NR09 4857 aa8.71□□□□□ -1.01
CCHCR1-215ENST00000488920 HELTA6NFD8 242 aa8.71□□□□□ -1.02
CCHCR1-215ENST00000488920 TOMM40O96008 361 aa8.71□□□□□ -1.02
CCHCR1-215ENST00000488920 GIG44P09565 113 aaPredicted RBP8.71□□□□□ -1.02
CCHCR1-215ENST00000488920 PSG1P11464 419 aa8.71□□□□□ -1.02
CCHCR1-215ENST00000488920 VAMP1P23763 118 aa8.71□□□□□ -1.02
CCHCR1-215ENST00000488920 S100A5P33763 92 aa8.71□□□□□ -1.02
CCHCR1-215ENST00000488920 NANOS2P60321 138 aaKnown RBP8.71□□□□□ -1.02
CCHCR1-215ENST00000488920 TMEM128Q5BJH2 165 aa8.71□□□□□ -1.02
CCHCR1-215ENST00000488920 TRPT1Q86TN4 253 aaKnown RBP8.71□□□□□ -1.02
CCHCR1-215ENST00000488920 OR51G1Q8NGK1 321 aa8.71□□□□□ -1.02
CCHCR1-215ENST00000488920 C11orf45Q8TAV5 145 aa8.71□□□□□ -1.02
CCHCR1-215ENST00000488920 RAB40CQ96S21 281 aa8.71□□□□□ -1.02
CCHCR1-215ENST00000488920 FBXL17Q9UF56 701 aa8.71□□□□□ -1.02
CCHCR1-215ENST00000488920 PITX3O75364 302 aa8.7□□□□□ -1.02
CCHCR1-215ENST00000488920 IAPPP10997 89 aa8.7□□□□□ -1.02
CCHCR1-215ENST00000488920 GPX4P36969 197 aaPredicted RBP8.7□□□□□ -1.02
CCHCR1-215ENST00000488920 AP2S1P53680 142 aaPredicted RBP8.7□□□□□ -1.02
CCHCR1-215ENST00000488920 GAMTQ14353 236 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms