RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 FHL3Q13643 280 aa10.15□□□□□ -0.78
HDAC1-208ENST00000482310 CLINT1Q14677 625 aa10.15□□□□□ -0.78
HDAC1-208ENST00000482310 OR4X1Q8NH49 305 aa10.15□□□□□ -0.78
HDAC1-208ENST00000482310 C20orf24Q9BUV8 137 aa10.15□□□□□ -0.78
HDAC1-208ENST00000482310 SLC25A31Q9H0C2 315 aa10.15□□□□□ -0.78
HDAC1-208ENST00000482310 SELENOKQ9Y6D0 94 aa10.15□□□□□ -0.78
HDAC1-208ENST00000482310 MEGF8Q7Z7M0 2845 aa10.14□□□□□ -0.79
HDAC1-208ENST00000482310 YIF1AO95070 293 aa10.14□□□□□ -0.79
HDAC1-208ENST00000482310 CTSGP08311 255 aa10.14□□□□□ -0.79
HDAC1-208ENST00000482310 EDN2P20800 178 aa10.14□□□□□ -0.79
HDAC1-208ENST00000482310 RPL12P30050 165 aaKnown RBP10.14□□□□□ -0.79
HDAC1-208ENST00000482310 AP2S1P53680 142 aaPredicted RBP10.14□□□□□ -0.79
HDAC1-208ENST00000482310 FGL1Q08830 312 aa10.14□□□□□ -0.79
HDAC1-208ENST00000482310 FAM209BQ5JX69 171 aa10.14□□□□□ -0.79
HDAC1-208ENST00000482310 LINC00482Q8N8I6 264 aa10.14□□□□□ -0.79
HDAC1-208ENST00000482310 ASB13Q8WXK3 278 aa10.14□□□□□ -0.79
HDAC1-208ENST00000482310 TXN2Q99757 166 aa10.14□□□□□ -0.79
HDAC1-208ENST00000482310 G3V3Q6 166 aa10.13□□□□□ -0.79
HDAC1-208ENST00000482310 OVOL1O14753 267 aa10.13□□□□□ -0.79
HDAC1-208ENST00000482310 SCGB2A1O75556 95 aa10.13□□□□□ -0.79
HDAC1-208ENST00000482310 NUP62P37198 522 aaPredicted RBP10.13□□□□□ -0.79
HDAC1-208ENST00000482310 HBG1P69891 147 aa10.13□□□□□ -0.79
HDAC1-208ENST00000482310 HBG2P69892 147 aa10.13□□□□□ -0.79
HDAC1-208ENST00000482310 DLK1P80370 383 aa10.13□□□□□ -0.79
HDAC1-208ENST00000482310 CD300CQ08708 224 aa10.13□□□□□ -0.79
HDAC1-208ENST00000482310 OR2F1Q13607 317 aa10.13□□□□□ -0.79
HDAC1-208ENST00000482310 SPSB3Q6PJ21 355 aa10.13□□□□□ -0.79
HDAC1-208ENST00000482310 UNQ9165/PRO28630Q6UXU0 137 aa10.13□□□□□ -0.79
HDAC1-208ENST00000482310 AKAP14Q86UN6 197 aa10.13□□□□□ -0.79
HDAC1-208ENST00000482310 TMEM116Q8NCL8 245 aa10.13□□□□□ -0.79
HDAC1-208ENST00000482310 OR1S2Q8NGQ3 325 aa10.13□□□□□ -0.79
HDAC1-208ENST00000482310 OR5C1Q8NGR4 320 aa10.13□□□□□ -0.79
HDAC1-208ENST00000482310 CACNG8Q8WXS5 425 aa10.13□□□□□ -0.79
HDAC1-208ENST00000482310 RCC1LQ96I51 464 aaKnown RBP10.13□□□□□ -0.79
HDAC1-208ENST00000482310 ST6GAL2Q96JF0 529 aa10.13□□□□□ -0.79
HDAC1-208ENST00000482310 GAR1Q9NY12 217 aaKnown RBP10.13□□□□□ -0.79
HDAC1-208ENST00000482310 HSPB11Q9Y547 144 aa10.13□□□□□ -0.79
HDAC1-208ENST00000482310 IGKV1OR2-108A0A075B7D4 117 aa10.12□□□□□ -0.79
HDAC1-208ENST00000482310 ARPC5O15511 151 aa10.12□□□□□ -0.79
HDAC1-208ENST00000482310 IGLC1P0CG04 106 aa10.12□□□□□ -0.79
HDAC1-208ENST00000482310 LYL1P12980 280 aa10.12□□□□□ -0.79
HDAC1-208ENST00000482310 FCGR2BP31994 310 aaPredicted RBP10.12□□□□□ -0.79
HDAC1-208ENST00000482310 ZNF90Q03938 601 aa10.12□□□□□ -0.79
HDAC1-208ENST00000482310 RELQ04864 619 aaPredicted RBP10.12□□□□□ -0.79
HDAC1-208ENST00000482310 BAXQ07812 192 aa10.12□□□□□ -0.79
HDAC1-208ENST00000482310 ZNF546Q86UE3 836 aa10.12□□□□□ -0.79
HDAC1-208ENST00000482310 C1QL4Q86Z23 238 aa10.12□□□□□ -0.79
HDAC1-208ENST00000482310 PUS1Q9Y606 427 aaKnown RBP eCLIP10.12□□□□□ -0.79
HDAC1-208ENST00000482310 IGKV1D-37A0A075B6S9 117 aa10.11□□□□□ -0.79
HDAC1-208ENST00000482310 TRAV30A0A087WSZ9 112 aa10.11□□□□□ -0.79
HDAC1-208ENST00000482310 IGHV3-49A0A0A0MS15 119 aa10.11□□□□□ -0.79
HDAC1-208ENST00000482310 IGKV1-17P01599 117 aa10.11□□□□□ -0.79
HDAC1-208ENST00000482310 IGLL1P15814 213 aa10.11□□□□□ -0.79
HDAC1-208ENST00000482310 FGF7P21781 194 aa10.11□□□□□ -0.79
HDAC1-208ENST00000482310 GATA2P23769 480 aaPredicted RBP10.11□□□□□ -0.79
HDAC1-208ENST00000482310 S100A11P31949 105 aa10.11□□□□□ -0.79
HDAC1-208ENST00000482310 KLF5Q13887 457 aaPredicted RBP10.11□□□□□ -0.79
HDAC1-208ENST00000482310 FAM106AQ4KMX7 169 aa10.11□□□□□ -0.79
HDAC1-208ENST00000482310 TM4SF20Q53R12 229 aa10.11□□□□□ -0.79
HDAC1-208ENST00000482310 TREML4Q6UXN2 200 aa10.11□□□□□ -0.79
HDAC1-208ENST00000482310 ZNF600Q6ZNG1 722 aa10.11□□□□□ -0.79
HDAC1-208ENST00000482310 INO80EQ8NBZ0 244 aaPredicted RBP10.11□□□□□ -0.79
HDAC1-208ENST00000482310 TMEM147Q9BVK8 224 aa10.11□□□□□ -0.79
HDAC1-208ENST00000482310 UQCC1Q9NVA1 299 aa10.11□□□□□ -0.79
HDAC1-208ENST00000482310 IGHV3OR16-13A0A075B7E8 117 aa10.1□□□□□ -0.79
HDAC1-208ENST00000482310 IGHV3-74A0A0B4J1X5 117 aa10.1□□□□□ -0.79
HDAC1-208ENST00000482310 SEC14L6B5MCN3 397 aa10.1□□□□□ -0.79
HDAC1-208ENST00000482310 TOMM20LQ6UXN7 152 aa10.1□□□□□ -0.79
HDAC1-208ENST00000482310 THAP8Q8NA92 274 aa10.1□□□□□ -0.79
HDAC1-208ENST00000482310 OR11H4Q8NGC9 324 aa10.1□□□□□ -0.79
HDAC1-208ENST00000482310 OR9G4Q8NGQ1 327 aa10.1□□□□□ -0.79
HDAC1-208ENST00000482310 ZNF414Q96IQ9 312 aa10.1□□□□□ -0.79
HDAC1-208ENST00000482310 ATP6V0BQ99437 205 aa10.1□□□□□ -0.79
HDAC1-208ENST00000482310 PBDC1Q9BVG4 233 aa10.1□□□□□ -0.79
HDAC1-208ENST00000482310 NPVFQ9HCQ7 196 aa10.1□□□□□ -0.79
HDAC1-208ENST00000482310 FBXL17Q9UF56 701 aa10.1□□□□□ -0.79
HDAC1-208ENST00000482310 IGHV3-66A0A0C4DH42 116 aa10.09□□□□□ -0.79
HDAC1-208ENST00000482310 RNF222A6NCQ9 220 aa10.09□□□□□ -0.79
HDAC1-208ENST00000482310 NDUFA4O00483 81 aa10.09□□□□□ -0.79
HDAC1-208ENST00000482310 SAP30O75446 220 aa10.09□□□□□ -0.79
HDAC1-208ENST00000482310 SCAF4O95104 1147 aaKnown RBP10.09□□□□□ -0.79
HDAC1-208ENST00000482310 IL4P05112 153 aa10.09□□□□□ -0.79
HDAC1-208ENST00000482310 RD3LP0DJH9 198 aa10.09□□□□□ -0.79
HDAC1-208ENST00000482310 PSG1P11464 419 aa10.09□□□□□ -0.79
HDAC1-208ENST00000482310 LYZP61626 148 aa10.09□□□□□ -0.79
HDAC1-208ENST00000482310 TEPPQ6URK8 271 aa10.09□□□□□ -0.79
HDAC1-208ENST00000482310 TMEM144Q7Z5S9 345 aa10.09□□□□□ -0.79
HDAC1-208ENST00000482310 GPHB5Q86YW7 130 aa10.09□□□□□ -0.79
HDAC1-208ENST00000482310 TMEM190Q8WZ59 177 aa10.09□□□□□ -0.79
HDAC1-208ENST00000482310 TRGV9Q99603 122 aa10.09□□□□□ -0.79
HDAC1-208ENST00000482310 MGST2Q99735 147 aa10.09□□□□□ -0.79
HDAC1-208ENST00000482310 ATP5SQ99766 215 aa10.09□□□□□ -0.79
HDAC1-208ENST00000482310 GGACTQ9BVM4 153 aa10.09□□□□□ -0.79
HDAC1-208ENST00000482310 WFDC1Q9HC57 220 aa10.09□□□□□ -0.79
HDAC1-208ENST00000482310 DOK5Q9P104 306 aa10.09□□□□□ -0.79
HDAC1-208ENST00000482310 TNFSF18Q9UNG2 199 aa10.09□□□□□ -0.79
HDAC1-208ENST00000482310 MGAM2Q2M2H8 2515 aa10.08□□□□□ -0.8
HDAC1-208ENST00000482310 TOMM40O96008 361 aa10.08□□□□□ -0.8
HDAC1-208ENST00000482310 ATP6V1FQ16864 119 aa10.08□□□□□ -0.8
HDAC1-208ENST00000482310 PRR31Q5SQ13 230 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms