RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 TMEM213A2RRL7 107 aa20.33■□□□□ 0.85
CCM2-211ENST00000478582 PMS2P5A8MQ11 134 aa20.33■□□□□ 0.85
CCM2-211ENST00000478582 K7EMT4 169 aa20.33■□□□□ 0.85
CCM2-211ENST00000478582 IGKV1-17P01599 117 aa20.33■□□□□ 0.85
CCM2-211ENST00000478582 IGLC1P0CG04 106 aa20.33■□□□□ 0.85
CCM2-211ENST00000478582 H2BFSP57053 126 aa20.33■□□□□ 0.85
CCM2-211ENST00000478582 GAMTQ14353 236 aa20.33■□□□□ 0.85
CCM2-211ENST00000478582 ZNF600Q6ZNG1 722 aa20.33■□□□□ 0.85
CCM2-211ENST00000478582 OR1S2Q8NGQ3 325 aa20.33■□□□□ 0.85
CCM2-211ENST00000478582 L7N2F9 121 aa20.32■□□□□ 0.84
CCM2-211ENST00000478582 C8orf88P0DMB2 117 aa20.32■□□□□ 0.84
CCM2-211ENST00000478582 VAMP2P63027 116 aa20.32■□□□□ 0.84
CCM2-211ENST00000478582 MARC2Q969Z3 335 aa20.32■□□□□ 0.84
CCM2-211ENST00000478582 ACY3Q96HD9 319 aa20.32■□□□□ 0.84
CCM2-211ENST00000478582 SLC35E1Q96K37 410 aa20.32■□□□□ 0.84
CCM2-211ENST00000478582 MGAT4CQ9UBM8 478 aa20.32■□□□□ 0.84
CCM2-211ENST00000478582 FOLR2P14207 255 aa20.31■□□□□ 0.84
CCM2-211ENST00000478582 PVALBP20472 110 aaPredicted RBP20.31■□□□□ 0.84
CCM2-211ENST00000478582 CBLN1P23435 193 aa20.31■□□□□ 0.84
CCM2-211ENST00000478582 OR10J1P30954 320 aa20.31■□□□□ 0.84
CCM2-211ENST00000478582 TM4SF20Q53R12 229 aa20.31■□□□□ 0.84
CCM2-211ENST00000478582 DAZ1Q9NQZ3 744 aaKnown RBP20.31■□□□□ 0.84
CCM2-211ENST00000478582 MRPL27Q9P0M9 148 aaKnown RBP20.31■□□□□ 0.84
CCM2-211ENST00000478582 S100A10P60903 97 aa20.3■□□□□ 0.84
CCM2-211ENST00000478582 YPEL3P61236 119 aaPredicted RBP20.3■□□□□ 0.84
CCM2-211ENST00000478582 TIGITQ495A1 244 aa20.3■□□□□ 0.84
CCM2-211ENST00000478582 DEFB121Q5J5C9 76 aa20.29■□□□□ 0.84
CCM2-211ENST00000478582 TOMM20LQ6UXN7 152 aa20.29■□□□□ 0.84
CCM2-211ENST00000478582 OR2K2Q8NGT1 345 aa20.29■□□□□ 0.84
CCM2-211ENST00000478582 TECRQ9NZ01 308 aaKnown RBP20.29■□□□□ 0.84
CCM2-211ENST00000478582 DEDDO75618 318 aa20.28■□□□□ 0.84
CCM2-211ENST00000478582 YIF1AO95070 293 aa20.28■□□□□ 0.84
CCM2-211ENST00000478582 METTL15P1P0C7V9 234 aa20.28■□□□□ 0.84
CCM2-211ENST00000478582 EDN2P20800 178 aa20.28■□□□□ 0.84
CCM2-211ENST00000478582 C20orf24Q9BUV8 137 aa20.28■□□□□ 0.84
CCM2-211ENST00000478582 ZFAND3Q9H8U3 227 aa20.28■□□□□ 0.84
CCM2-211ENST00000478582 PUS1Q9Y606 427 aaKnown RBP eCLIP20.28■□□□□ 0.84
CCM2-211ENST00000478582 DEFB114Q30KQ6 69 aa20.27■□□□□ 0.84
CCM2-211ENST00000478582 OR10P1Q8NGE3 313 aa20.27■□□□□ 0.84
CCM2-211ENST00000478582 MED28Q9H204 178 aa20.27■□□□□ 0.84
CCM2-211ENST00000478582 CCNKO75909 580 aa20.26■□□□□ 0.83
CCM2-211ENST00000478582 RLN2P04090 185 aa20.26■□□□□ 0.83
CCM2-211ENST00000478582 DLK1P80370 383 aa20.26■□□□□ 0.83
CCM2-211ENST00000478582 OR8G2PQ6IF36 304 aa20.26■□□□□ 0.83
CCM2-211ENST00000478582 HAPLN4Q86UW8 402 aa20.26■□□□□ 0.83
CCM2-211ENST00000478582 THAP8Q8NA92 274 aa20.26■□□□□ 0.83
CCM2-211ENST00000478582 WDR89Q96FK6 387 aaPredicted RBP20.26■□□□□ 0.83
CCM2-211ENST00000478582 LYRM2Q9NU23 88 aaPredicted RBP20.26■□□□□ 0.83
CCM2-211ENST00000478582 ZNF256Q9Y2P7 627 aaPredicted RBP20.26■□□□□ 0.83
CCM2-211ENST00000478582 IGKV1D-37A0A075B6S9 117 aa20.25■□□□□ 0.83
CCM2-211ENST00000478582 IGHV3OR16-8A0A075B7F1 116 aa20.25■□□□□ 0.83
CCM2-211ENST00000478582 FNDC10F2Z333 226 aa20.25■□□□□ 0.83
CCM2-211ENST00000478582 SCAF4O95104 1147 aaKnown RBP20.25■□□□□ 0.83
CCM2-211ENST00000478582 CXCL3P19876 107 aa20.25■□□□□ 0.83
CCM2-211ENST00000478582 BCAP31P51572 246 aa20.25■□□□□ 0.83
CCM2-211ENST00000478582 CAV2P51636 162 aa20.25■□□□□ 0.83
CCM2-211ENST00000478582 ACOT7LQ6ZUV0 252 aa20.25■□□□□ 0.83
CCM2-211ENST00000478582 DYNLRB2Q8TF09 96 aa20.25■□□□□ 0.83
CCM2-211ENST00000478582 Q8WTZ3 238 aa20.25■□□□□ 0.83
CCM2-211ENST00000478582 PPP1R1CQ8WVI7 109 aa20.25■□□□□ 0.83
CCM2-211ENST00000478582 GINS3Q9BRX5 216 aa20.25■□□□□ 0.83
CCM2-211ENST00000478582 FAM24AA6NFZ4 105 aa20.24■□□□□ 0.83
CCM2-211ENST00000478582 TOMM40O96008 361 aa20.24■□□□□ 0.83
CCM2-211ENST00000478582 TRGV9Q99603 122 aa20.24■□□□□ 0.83
CCM2-211ENST00000478582 GGACTQ9BVM4 153 aa20.24■□□□□ 0.83
CCM2-211ENST00000478582 MLXQ9UH92 298 aa20.24■□□□□ 0.83
CCM2-211ENST00000478582 TRAV14DV4A0A0A6YYC5 116 aa20.23■□□□□ 0.83
CCM2-211ENST00000478582 ZFP92A6NM28 416 aa20.23■□□□□ 0.83
CCM2-211ENST00000478582 E5RGE8 158 aa20.23■□□□□ 0.83
CCM2-211ENST00000478582 H0YIZ8 118 aa20.23■□□□□ 0.83
CCM2-211ENST00000478582 ARL16Q0P5N6 197 aa20.23■□□□□ 0.83
CCM2-211ENST00000478582 FCN2Q15485 313 aa20.23■□□□□ 0.83
CCM2-211ENST00000478582 LCN12Q6JVE5 192 aa20.23■□□□□ 0.83
CCM2-211ENST00000478582 TMEM144Q7Z5S9 345 aa20.23■□□□□ 0.83
CCM2-211ENST00000478582 OR11H7Q8NGC8 314 aa20.23■□□□□ 0.83
CCM2-211ENST00000478582 SMPXQ9UHP9 88 aa20.23■□□□□ 0.83
CCM2-211ENST00000478582 IGKV1OR2-108A0A075B7D4 117 aa20.22■□□□□ 0.83
CCM2-211ENST00000478582 IGHV7-4-1A0A0J9YVY3 117 aa20.22■□□□□ 0.83
CCM2-211ENST00000478582 ZNF207O43670 478 aaKnown RBP20.22■□□□□ 0.83
CCM2-211ENST00000478582 RD3LP0DJH9 198 aa20.22■□□□□ 0.83
CCM2-211ENST00000478582 CD300EQ496F6 205 aaPredicted RBP20.22■□□□□ 0.83
CCM2-211ENST00000478582 LRRC37A5PQ49AS3 106 aa20.22■□□□□ 0.83
CCM2-211ENST00000478582 TMEM252Q8N6L7 170 aa20.22■□□□□ 0.83
CCM2-211ENST00000478582 MPC2O95563 127 aa20.21■□□□□ 0.83
CCM2-211ENST00000478582 FABP1P07148 127 aa20.21■□□□□ 0.83
CCM2-211ENST00000478582 PSG1P11464 419 aa20.21■□□□□ 0.83
CCM2-211ENST00000478582 SULT1A1P50225 295 aa20.21■□□□□ 0.83
CCM2-211ENST00000478582 RRAS2P62070 204 aaPredicted RBP20.21■□□□□ 0.83
CCM2-211ENST00000478582 OR5AC2Q9NZP5 309 aa20.21■□□□□ 0.83
CCM2-211ENST00000478582 IGSF23A1L1A6 192 aa20.2■□□□□ 0.82
CCM2-211ENST00000478582 PET100P0DJ07 73 aa20.2■□□□□ 0.82
CCM2-211ENST00000478582 P2RY1P47900 373 aa20.2■□□□□ 0.82
CCM2-211ENST00000478582 ZNF90Q03938 601 aa20.2■□□□□ 0.82
CCM2-211ENST00000478582 AKR1C1Q04828 323 aa20.2■□□□□ 0.82
CCM2-211ENST00000478582 BTNL8Q6UX41 500 aa20.2■□□□□ 0.82
CCM2-211ENST00000478582 RNF126Q9BV68 326 aa20.2■□□□□ 0.82
CCM2-211ENST00000478582 NPVFQ9HCQ7 196 aa20.2■□□□□ 0.82
CCM2-211ENST00000478582 IZUMO1RA6ND01 250 aa20.19■□□□□ 0.82
CCM2-211ENST00000478582 GP9P14770 177 aa20.19■□□□□ 0.82
CCM2-211ENST00000478582 CRYBB3P26998 211 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms