RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 GGTLC1Q9BX51 225 aa2.1□□□□□ -2.07
HMGN4-202ENST00000477243 OR2J1Q9GZK6 312 aa2.1□□□□□ -2.07
HMGN4-202ENST00000477243 OR2D2Q9H210 308 aa2.1□□□□□ -2.07
HMGN4-202ENST00000477243 PLEKHF2Q9H8W4 249 aa2.1□□□□□ -2.07
HMGN4-202ENST00000477243 RNF122Q9H9V4 155 aa2.1□□□□□ -2.07
HMGN4-202ENST00000477243 PDFQ9HBH1 243 aa2.1□□□□□ -2.07
HMGN4-202ENST00000477243 TMEM38BQ9NVV0 291 aa2.1□□□□□ -2.07
HMGN4-202ENST00000477243 FBXL12Q9NXK8 326 aa2.1□□□□□ -2.07
HMGN4-202ENST00000477243 ZNF706Q9Y5V0 76 aaPredicted RBP2.1□□□□□ -2.07
HMGN4-202ENST00000477243 MYH9P35579 1960 aaKnown RBP2.1□□□□□ -2.07
HMGN4-202ENST00000477243 A0A1B0GUL6 1792 aa2.1□□□□□ -2.07
HMGN4-202ENST00000477243 KNTC1P50748 2209 aa2.1□□□□□ -2.07
HMGN4-202ENST00000477243 DNAH1Q9P2D7 4330 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 MYH7BA7E2Y1 1941 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 DENND4CQ5VZ89 1909 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 SIPA1L3O60292 1781 aaPredicted RBP2.09□□□□□ -2.07
HMGN4-202ENST00000477243 IGLV11-55A0A075B6I3 123 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 TRAV9-1A0A075B6T8 112 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 A0A087X002 238 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 LOC102724200A0A096LPH7 203 aaPredicted RBP2.09□□□□□ -2.07
HMGN4-202ENST00000477243 IGHV1-45A0A0A0MS14 117 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 IGKV6D-21A0A0A0MT36 114 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 TRAV5A0A0B4J249 113 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 IGHV1OR15-9A0A0B4J2B8 117 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 DUXBA0A1W2PPF3 345 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 C9orf170A2RU37 121 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 LINC00862A6NCI5 91 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 DPRXA6NFQ7 191 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 A8MWL6 223 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 C4orf51C9J302 202 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 INS-IGF2F8WCM5 200 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 TMX2-CTNND1H3BSU7 103 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 M0R2Z0 102 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 PAX4O43316 350 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 TRAF3IP2O43734 574 aaPredicted RBP2.09□□□□□ -2.07
HMGN4-202ENST00000477243 SRSF10O75494 262 aaKnown RBP2.09□□□□□ -2.07
HMGN4-202ENST00000477243 FSTL3O95633 263 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 OR2H2O95918 312 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 LTAP01374 205 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 IFNA4P05014 189 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 METTL15P1P0C7V9 234 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 ZNF688P0C7X2 276 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 BCL2P10415 239 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 CMPK1P30085 196 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 OPRM1P35372 400 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 CCR2P41597 374 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 LPAR6P43657 344 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 VEGFCP49767 419 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 TAF9Q16594 264 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 TNFAIP8L3Q5GJ75 292 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 TMEM69Q5SWH9 247 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 HES3Q5TGS1 186 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 AWAT2Q6E213 333 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 FAAP20Q6NZ36 180 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 EBLN2Q6P2I7 272 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 ZNF613Q6PF04 617 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 MORN3Q6PF18 240 aaPredicted RBP2.09□□□□□ -2.07
HMGN4-202ENST00000477243 Q6Q795 121 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 PDPNQ86YL7 162 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 MKXQ8IYA7 352 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 C1orf174Q8IYL3 243 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 TCTE3Q8IZS6 198 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 C10orf126Q8N4M7 172 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 C12orf45Q8N5I9 185 aaPredicted RBP2.09□□□□□ -2.07
HMGN4-202ENST00000477243 YIPF7Q8N8F6 280 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 TMEM229BQ8NBD8 167 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 SGMS2Q8NHU3 365 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 SLC25A40Q8TBP6 338 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 KLK6Q92876 244 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 LYZL4Q96KX0 146 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 SPIN2AQ99865 258 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 SPIN2BQ9BPZ2 258 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 SOSTQ9BQB4 213 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 LXNQ9BS40 222 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 WDR61Q9GZS3 305 aaKnown RBP2.09□□□□□ -2.07
HMGN4-202ENST00000477243 ZNF696Q9H7X3 374 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 CXorf21Q9HAI6 301 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 DEC1Q9P2X7 70 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 GNG8Q9UK08 70 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 TRAPPC2LQ9UL33 140 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 MOB4Q9Y3A3 225 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 MED31Q9Y3C7 131 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 U3KQ87 197 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 PIKFYVEQ9Y2I7 2098 aa2.09□□□□□ -2.07
HMGN4-202ENST00000477243 KIAA1671Q9BY89 1806 aa2.09□□□□□ -2.08
HMGN4-202ENST00000477243 PLXNB3Q9ULL4 1909 aa2.09□□□□□ -2.08
HMGN4-202ENST00000477243 SCN2AQ99250 2005 aa2.08□□□□□ -2.08
HMGN4-202ENST00000477243 FOCADQ5VW36 1801 aa2.08□□□□□ -2.08
HMGN4-202ENST00000477243 F5P12259 2224 aa2.08□□□□□ -2.08
HMGN4-202ENST00000477243 SPAG17Q6Q759 2223 aa2.08□□□□□ -2.08
HMGN4-202ENST00000477243 A0A087WUU8 490 aa2.08□□□□□ -2.08
HMGN4-202ENST00000477243 TRAV38-1A0A0B4J264 116 aa2.08□□□□□ -2.08
HMGN4-202ENST00000477243 IGHV3-66A0A0C4DH42 116 aa2.08□□□□□ -2.08
HMGN4-202ENST00000477243 A0A0J9YY10 115 aa2.08□□□□□ -2.08
HMGN4-202ENST00000477243 PVALEFA0A1B0GWK0 134 aa2.08□□□□□ -2.08
HMGN4-202ENST00000477243 TRDV1A0A1B0GX56 115 aa2.08□□□□□ -2.08
HMGN4-202ENST00000477243 A0A1B0GX78 115 aa2.08□□□□□ -2.08
HMGN4-202ENST00000477243 EPM2AB3EWF7 344 aa2.08□□□□□ -2.08
HMGN4-202ENST00000477243 J3QR89 54 aa2.08□□□□□ -2.08
HMGN4-202ENST00000477243 COX7A2LO14548 114 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms