RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, human

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRCH3-215	ENST00000476664	PFDN1	O60925	122 aa		4.66	□□□□□ -1.66
LRCH3-215	ENST00000476664	LTA	P01374	205 aa		4.66	□□□□□ -1.66
LRCH3-215	ENST00000476664	HLA-DQA1	P01909	254 aa		4.66	□□□□□ -1.66
LRCH3-215	ENST00000476664	TLX1NB	P0CAT3	122 aa		4.66	□□□□□ -1.66
LRCH3-215	ENST00000476664	FAM236C	P0DP71	79 aa		4.66	□□□□□ -1.66
LRCH3-215	ENST00000476664	SLC25A16	P16260	332 aa		4.66	□□□□□ -1.66
LRCH3-215	ENST00000476664	SNRPF	P62306	86 aa	Known RBP	4.66	□□□□□ -1.66
LRCH3-215	ENST00000476664	SNRPD2	P62316	118 aa	Known RBP	4.66	□□□□□ -1.66
LRCH3-215	ENST00000476664	CAV1	Q03135	178 aa		4.66	□□□□□ -1.66
LRCH3-215	ENST00000476664	OR10G2	Q8NGC3	310 aa		4.66	□□□□□ -1.66
LRCH3-215	ENST00000476664	OR11H6	Q8NGC7	330 aa		4.66	□□□□□ -1.66
LRCH3-215	ENST00000476664	OR2T27	Q8NH04	317 aa		4.66	□□□□□ -1.66
LRCH3-215	ENST00000476664	GPER1	Q99527	375 aa		4.66	□□□□□ -1.66
LRCH3-215	ENST00000476664	SPANXA1	Q9NS26	97 aa		4.66	□□□□□ -1.66
LRCH3-215	ENST00000476664	CMTM6	Q9NX76	183 aa		4.66	□□□□□ -1.66
LRCH3-215	ENST00000476664	ENOPH1	Q9UHY7	261 aa		4.66	□□□□□ -1.66
LRCH3-215	ENST00000476664		A0A087WYN8	130 aa		4.65	□□□□□ -1.67
LRCH3-215	ENST00000476664	C4orf51	C9J302	202 aa		4.65	□□□□□ -1.67
LRCH3-215	ENST00000476664	APOM	O95445	188 aa		4.65	□□□□□ -1.67
LRCH3-215	ENST00000476664	LHX2	P50458	406 aa		4.65	□□□□□ -1.67
LRCH3-215	ENST00000476664	IL15RA	Q13261	267 aa		4.65	□□□□□ -1.67
LRCH3-215	ENST00000476664	APOF	Q13790	326 aa		4.65	□□□□□ -1.67
LRCH3-215	ENST00000476664	MMD	Q15546	238 aa		4.65	□□□□□ -1.67
LRCH3-215	ENST00000476664	PLPPR5	Q32ZL2	321 aa		4.65	□□□□□ -1.67
LRCH3-215	ENST00000476664	AKR1C8P	Q5T2L2	129 aa		4.65	□□□□□ -1.67
LRCH3-215	ENST00000476664	KPRP	Q5T749	579 aa	Predicted RBP	4.65	□□□□□ -1.67
LRCH3-215	ENST00000476664	NANOGP8	Q6NSW7	305 aa		4.65	□□□□□ -1.67
LRCH3-215	ENST00000476664	GOLT1A	Q6ZVE7	132 aa		4.65	□□□□□ -1.67
LRCH3-215	ENST00000476664	ANKRD29	Q8N6D5	301 aa		4.65	□□□□□ -1.67
LRCH3-215	ENST00000476664	OR8B12	Q8NGG6	310 aa		4.65	□□□□□ -1.67
LRCH3-215	ENST00000476664	OR5W2	Q8NH69	310 aa		4.65	□□□□□ -1.67
LRCH3-215	ENST00000476664	SKA2	Q8WVK7	121 aa	Predicted RBP	4.65	□□□□□ -1.67
LRCH3-215	ENST00000476664	NARS2	Q96I59	477 aa	Known RBP	4.65	□□□□□ -1.67
LRCH3-215	ENST00000476664	TBL1Y	Q9BQ87	522 aa		4.65	□□□□□ -1.67
LRCH3-215	ENST00000476664	RNASE7	Q9H1E1	156 aa	Known RBP	4.65	□□□□□ -1.67
LRCH3-215	ENST00000476664	ABCG5	Q9H222	651 aa		4.65	□□□□□ -1.67
LRCH3-215	ENST00000476664	WFDC1	Q9HC57	220 aa		4.65	□□□□□ -1.67
LRCH3-215	ENST00000476664	PRTFDC1	Q9NRG1	225 aa		4.65	□□□□□ -1.67
LRCH3-215	ENST00000476664	ZNRD1	Q9P1U0	126 aa		4.65	□□□□□ -1.67
LRCH3-215	ENST00000476664	ANAPC10	Q9UM13	185 aa		4.65	□□□□□ -1.67
LRCH3-215	ENST00000476664	ERGIC3	Q9Y282	383 aa		4.65	□□□□□ -1.67
LRCH3-215	ENST00000476664	TET2	Q6N021	2002 aa	Predicted RBP	4.65	□□□□□ -1.67
LRCH3-215	ENST00000476664	PRR14L	Q5THK1	2151 aa		4.64	□□□□□ -1.67
LRCH3-215	ENST00000476664	TMED7-TICAM2	A0A0A6YYA0	188 aa		4.64	□□□□□ -1.67
LRCH3-215	ENST00000476664	TRAV26-2	A0A0B4J265	109 aa		4.64	□□□□□ -1.67
LRCH3-215	ENST00000476664	IGHV1-69-2	A0A0G2JMI3	117 aa		4.64	□□□□□ -1.67
LRCH3-215	ENST00000476664	TMEM223	A0PJW6	202 aa		4.64	□□□□□ -1.67
LRCH3-215	ENST00000476664	ZNF850	A8MQ14	1090 aa		4.64	□□□□□ -1.67
LRCH3-215	ENST00000476664	BCL2L11	O43521	198 aa		4.64	□□□□□ -1.67
LRCH3-215	ENST00000476664	HLA-DRB1	P01911	266 aa		4.64	□□□□□ -1.67
LRCH3-215	ENST00000476664	SERPINE1	P05121	402 aa		4.64	□□□□□ -1.67
LRCH3-215	ENST00000476664	OPRM1	P35372	400 aa		4.64	□□□□□ -1.67
LRCH3-215	ENST00000476664	ZNF133	P52736	654 aa	Predicted RBP	4.64	□□□□□ -1.67
LRCH3-215	ENST00000476664	RHOB	P62745	196 aa		4.64	□□□□□ -1.67
LRCH3-215	ENST00000476664	LCE5A	Q5TCM9	118 aa		4.64	□□□□□ -1.67
LRCH3-215	ENST00000476664	LAIR2	Q6ISS4	152 aa		4.64	□□□□□ -1.67
LRCH3-215	ENST00000476664	GDPD1	Q8N9F7	314 aa		4.64	□□□□□ -1.67
LRCH3-215	ENST00000476664	OR13D1	Q8NGV5	346 aa		4.64	□□□□□ -1.67
LRCH3-215	ENST00000476664	CNBD2	Q96M20	576 aa		4.64	□□□□□ -1.67
LRCH3-215	ENST00000476664	FAM107B	Q9H098	131 aa		4.64	□□□□□ -1.67
LRCH3-215	ENST00000476664	UQCC1	Q9NVA1	299 aa		4.64	□□□□□ -1.67
LRCH3-215	ENST00000476664	ZNF492	Q9P255	531 aa		4.64	□□□□□ -1.67
LRCH3-215	ENST00000476664	TMEM14A	Q9Y6G1	99 aa		4.64	□□□□□ -1.67
LRCH3-215	ENST00000476664	IGLV3-12	A0A075B6K2	115 aa		4.63	□□□□□ -1.67
LRCH3-215	ENST00000476664	PINLYP	A6NC86	204 aa		4.63	□□□□□ -1.67
LRCH3-215	ENST00000476664		M0R381	172 aa		4.63	□□□□□ -1.67
LRCH3-215	ENST00000476664	IGKV3-20	P01619	116 aa		4.63	□□□□□ -1.67
LRCH3-215	ENST00000476664	PAEP	P09466	180 aa		4.63	□□□□□ -1.67
LRCH3-215	ENST00000476664	CDK2	P24941	298 aa		4.63	□□□□□ -1.67
LRCH3-215	ENST00000476664	S100A2	P29034	98 aa		4.63	□□□□□ -1.67
LRCH3-215	ENST00000476664	PLGLB1	Q02325	96 aa		4.63	□□□□□ -1.67
LRCH3-215	ENST00000476664	BTN1A1	Q13410	526 aa		4.63	□□□□□ -1.67
LRCH3-215	ENST00000476664	LUZP6	Q538Z0	58 aa		4.63	□□□□□ -1.67
LRCH3-215	ENST00000476664	NTM-AS1	Q6ZSK4	140 aa		4.63	□□□□□ -1.67
LRCH3-215	ENST00000476664	DAZ4	Q86SG3	579 aa	Known RBP	4.63	□□□□□ -1.67
LRCH3-215	ENST00000476664	LRP11	Q86VZ4	500 aa		4.63	□□□□□ -1.67
LRCH3-215	ENST00000476664	BORCS5	Q969J3	196 aa		4.63	□□□□□ -1.67
LRCH3-215	ENST00000476664	TMEM147	Q9BVK8	224 aa		4.63	□□□□□ -1.67
LRCH3-215	ENST00000476664	MS4A8	Q9BY19	250 aa		4.63	□□□□□ -1.67
LRCH3-215	ENST00000476664	COMMD5	Q9GZQ3	224 aa		4.63	□□□□□ -1.67
LRCH3-215	ENST00000476664	PDF	Q9HBH1	243 aa		4.63	□□□□□ -1.67
LRCH3-215	ENST00000476664	DAZ1	Q9NQZ3	744 aa	Known RBP	4.63	□□□□□ -1.67
LRCH3-215	ENST00000476664	LYRM2	Q9NU23	88 aa	Predicted RBP	4.63	□□□□□ -1.67
LRCH3-215	ENST00000476664	NCKAP5	O14513	1909 aa		4.63	□□□□□ -1.67
LRCH3-215	ENST00000476664	EXPH5	Q8NEV8	1989 aa		4.63	□□□□□ -1.67
LRCH3-215	ENST00000476664		A0A1W2PQ67	120 aa		4.62	□□□□□ -1.67
LRCH3-215	ENST00000476664		G3V2T6	193 aa		4.62	□□□□□ -1.67
LRCH3-215	ENST00000476664	ORC5	O43913	435 aa		4.62	□□□□□ -1.67
LRCH3-215	ENST00000476664	CRYZL1	O95825	349 aa		4.62	□□□□□ -1.67
LRCH3-215	ENST00000476664	IGLV1-47	P01700	117 aa		4.62	□□□□□ -1.67
LRCH3-215	ENST00000476664	HLA-DQB2	P05538	268 aa		4.62	□□□□□ -1.67
LRCH3-215	ENST00000476664	CRABP1	P29762	137 aa		4.62	□□□□□ -1.67
LRCH3-215	ENST00000476664	PHB	P35232	272 aa		4.62	□□□□□ -1.67
LRCH3-215	ENST00000476664	LINC00313	P59037	77 aa		4.62	□□□□□ -1.67
LRCH3-215	ENST00000476664	AP1S1	P61966	158 aa		4.62	□□□□□ -1.67
LRCH3-215	ENST00000476664	FCN2	Q15485	313 aa		4.62	□□□□□ -1.67
LRCH3-215	ENST00000476664	KCNJ8	Q15842	424 aa		4.62	□□□□□ -1.67
LRCH3-215	ENST00000476664	RPS19BP1	Q86WX3	136 aa	Known RBP	4.62	□□□□□ -1.67
LRCH3-215	ENST00000476664	OR52N1	Q8NH53	320 aa		4.62	□□□□□ -1.67
LRCH3-215	ENST00000476664	C10orf105	Q8TEF2	133 aa		4.62	□□□□□ -1.67

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