RNA–Protein interactions for RNA: ENST00000474851.1

LSAMP-203, Transcript of limbic system associated membrane protein, humanhuman

TSL 5

Gene LSAMP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-203ENST00000474851 CNIH1O95406 144 aa5.53□□□□□ -1.52
LSAMP-203ENST00000474851 PPYP01298 95 aa5.53□□□□□ -1.52
LSAMP-203ENST00000474851 IGHV3-11P01762 117 aa5.53□□□□□ -1.52
LSAMP-203ENST00000474851 HLA-AP01891 365 aaKnown RBP5.53□□□□□ -1.52
LSAMP-203ENST00000474851 LGALS1P09382 135 aaKnown RBP5.53□□□□□ -1.52
LSAMP-203ENST00000474851 SEC11BP0C7V7 166 aa5.53□□□□□ -1.52
LSAMP-203ENST00000474851 SAA1P0DJI8 122 aaPredicted RBP5.53□□□□□ -1.52
LSAMP-203ENST00000474851 GZMBP10144 247 aa5.53□□□□□ -1.52
LSAMP-203ENST00000474851 TBPP20226 339 aa5.53□□□□□ -1.52
LSAMP-203ENST00000474851 ZNF616Q08AN1 781 aa5.53□□□□□ -1.52
LSAMP-203ENST00000474851 PPP1R1AQ13522 171 aa5.53□□□□□ -1.52
LSAMP-203ENST00000474851 CLINT1Q14677 625 aa5.53□□□□□ -1.52
LSAMP-203ENST00000474851 ELOBQ15370 118 aa5.53□□□□□ -1.52
LSAMP-203ENST00000474851 MSMO1Q15800 293 aa5.53□□□□□ -1.52
LSAMP-203ENST00000474851 GUK1Q16774 197 aa5.53□□□□□ -1.52
LSAMP-203ENST00000474851 ZNF66Q6ZN08 573 aa5.53□□□□□ -1.52
LSAMP-203ENST00000474851 VKORC1L1Q8N0U8 176 aa5.53□□□□□ -1.52
LSAMP-203ENST00000474851 ABHD5Q8WTS1 349 aa5.53□□□□□ -1.52
LSAMP-203ENST00000474851 DCUN1D4Q92564 292 aa5.53□□□□□ -1.52
LSAMP-203ENST00000474851 DLX4Q92988 240 aaPredicted RBP5.53□□□□□ -1.52
LSAMP-203ENST00000474851 SEC22AQ96IW7 307 aa5.53□□□□□ -1.52
LSAMP-203ENST00000474851 HSD17B10Q99714 261 aaKnown RBP5.53□□□□□ -1.52
LSAMP-203ENST00000474851 SLC25A31Q9H0C2 315 aa5.53□□□□□ -1.52
LSAMP-203ENST00000474851 SLC35B3Q9H1N7 401 aa5.53□□□□□ -1.52
LSAMP-203ENST00000474851 ZNF430Q9H8G1 570 aaPredicted RBP5.53□□□□□ -1.52
LSAMP-203ENST00000474851 PLEKHA2Q9HB19 425 aa5.53□□□□□ -1.52
LSAMP-203ENST00000474851 CCL28Q9NRJ3 127 aa5.53□□□□□ -1.52
LSAMP-203ENST00000474851 TMEM242Q9NWH2 141 aa5.53□□□□□ -1.52
LSAMP-203ENST00000474851 CHTOPQ9Y3Y2 248 aaKnown RBP5.53□□□□□ -1.52
LSAMP-203ENST00000474851 KIR2DL5BA0A0G2JN68 375 aa5.52□□□□□ -1.53
LSAMP-203ENST00000474851 KIR2DL5BA0A0G2JPC4 375 aa5.52□□□□□ -1.53
LSAMP-203ENST00000474851 E7EUB6 86 aa5.52□□□□□ -1.53
LSAMP-203ENST00000474851 LINC01619G3V211 115 aa5.52□□□□□ -1.53
LSAMP-203ENST00000474851 H3BUA1 57 aa5.52□□□□□ -1.53
LSAMP-203ENST00000474851 M0R143 59 aa5.52□□□□□ -1.53
LSAMP-203ENST00000474851 CCSO14618 274 aa5.52□□□□□ -1.53
LSAMP-203ENST00000474851 RAMP3O60896 148 aa5.52□□□□□ -1.53
LSAMP-203ENST00000474851 JTBO76095 146 aa5.52□□□□□ -1.53
LSAMP-203ENST00000474851 TRGV3P03979 118 aa5.52□□□□□ -1.53
LSAMP-203ENST00000474851 HSPB1P04792 205 aaKnown RBP5.52□□□□□ -1.53
LSAMP-203ENST00000474851 IL6RP08887 468 aaPredicted RBP5.52□□□□□ -1.53
LSAMP-203ENST00000474851 GNRHRP30968 328 aa5.52□□□□□ -1.53
LSAMP-203ENST00000474851 AKR1C3P42330 323 aa5.52□□□□□ -1.53
LSAMP-203ENST00000474851 SLURP1P55000 103 aa5.52□□□□□ -1.53
LSAMP-203ENST00000474851 TAS2R31P59538 309 aa5.52□□□□□ -1.53
LSAMP-203ENST00000474851 C21orf62-AS1Q17RA5 79 aa5.52□□□□□ -1.53
LSAMP-203ENST00000474851 VMA21Q3ZAQ7 101 aa5.52□□□□□ -1.53
LSAMP-203ENST00000474851 C10orf55Q5SWW7 151 aa5.52□□□□□ -1.53
LSAMP-203ENST00000474851 C9orf66Q5T8R8 295 aa5.52□□□□□ -1.53
LSAMP-203ENST00000474851 ZNF818PQ6ZRF7 136 aa5.52□□□□□ -1.53
LSAMP-203ENST00000474851 Q6ZRG5 221 aa5.52□□□□□ -1.53
LSAMP-203ENST00000474851 KCTD9Q7L273 389 aa5.52□□□□□ -1.53
LSAMP-203ENST00000474851 KIR2DL5AQ8N109 375 aa5.52□□□□□ -1.53
LSAMP-203ENST00000474851 ZBTB34Q8NCN2 500 aa5.52□□□□□ -1.53
LSAMP-203ENST00000474851 ADAD2Q8NCV1 583 aaKnown RBP5.52□□□□□ -1.53
LSAMP-203ENST00000474851 SRSF12Q8WXF0 261 aaKnown RBP5.52□□□□□ -1.53
LSAMP-203ENST00000474851 DPF1Q92782 380 aa5.52□□□□□ -1.53
LSAMP-203ENST00000474851 PACRGQ96M98 296 aaPredicted RBP5.52□□□□□ -1.53
LSAMP-203ENST00000474851 PRO1933Q9H354 126 aa5.52□□□□□ -1.53
LSAMP-203ENST00000474851 STRAPQ9Y3F4 350 aaKnown RBP5.52□□□□□ -1.53
LSAMP-203ENST00000474851 LSM4Q9Y4Z0 139 aaKnown RBP5.52□□□□□ -1.53
LSAMP-203ENST00000474851 HUWE1Q7Z6Z7 4374 aaKnown RBP5.51□□□□□ -1.53
LSAMP-203ENST00000474851 TRBV24-1A0A075B6N3 115 aa5.51□□□□□ -1.53
LSAMP-203ENST00000474851 TRBV9A0A0B4J1U6 114 aa5.51□□□□□ -1.53
LSAMP-203ENST00000474851 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.51□□□□□ -1.53
LSAMP-203ENST00000474851 B4DEV8 164 aa5.51□□□□□ -1.53
LSAMP-203ENST00000474851 TEX22C9J3V5 150 aa5.51□□□□□ -1.53
LSAMP-203ENST00000474851 UMAD1C9J7I0 102 aa5.51□□□□□ -1.53
LSAMP-203ENST00000474851 OVOL1O14753 267 aa5.51□□□□□ -1.53
LSAMP-203ENST00000474851 RBFOX2O43251 390 aaKnown RBP eCLIP5.51□□□□□ -1.53
LSAMP-203ENST00000474851 TNFSF12O43508 249 aa5.51□□□□□ -1.53
LSAMP-203ENST00000474851 SNRPCP09234 159 aaKnown RBP5.51□□□□□ -1.53
LSAMP-203ENST00000474851 CXCL1P09341 107 aa5.51□□□□□ -1.53
LSAMP-203ENST00000474851 APELAP0DMC3 54 aa5.51□□□□□ -1.53
LSAMP-203ENST00000474851 ZNF25P17030 456 aaPredicted RBP5.51□□□□□ -1.53
LSAMP-203ENST00000474851 RPS10P46783 165 aaKnown RBP5.51□□□□□ -1.53
LSAMP-203ENST00000474851 INSL3P51460 131 aa5.51□□□□□ -1.53
LSAMP-203ENST00000474851 TPPP2P59282 170 aa5.51□□□□□ -1.53
LSAMP-203ENST00000474851 ERVFC1-1P60608 527 aa5.51□□□□□ -1.53
LSAMP-203ENST00000474851 RBX1P62877 108 aa5.51□□□□□ -1.53
LSAMP-203ENST00000474851 KLF5Q13887 457 aaPredicted RBP5.51□□□□□ -1.53
LSAMP-203ENST00000474851 TNXAQ16473 311 aa5.51□□□□□ -1.53
LSAMP-203ENST00000474851 KLK9Q2XQG4 91 aa5.51□□□□□ -1.53
LSAMP-203ENST00000474851 LRRC37A5PQ49AS3 106 aa5.51□□□□□ -1.53
LSAMP-203ENST00000474851 DEFB121Q5J5C9 76 aa5.51□□□□□ -1.53
LSAMP-203ENST00000474851 GGNBP1Q5YKI7 109 aa5.51□□□□□ -1.53
LSAMP-203ENST00000474851 RPL7L1Q6DKI1 246 aaKnown RBP5.51□□□□□ -1.53
LSAMP-203ENST00000474851 ZNF343Q6P1L6 599 aa5.51□□□□□ -1.53
LSAMP-203ENST00000474851 ACSM6Q6P461 480 aa5.51□□□□□ -1.53
LSAMP-203ENST00000474851 TMEM183AQ8IXX5 376 aa5.51□□□□□ -1.53
LSAMP-203ENST00000474851 TTC9CQ8N5M4 171 aa5.51□□□□□ -1.53
LSAMP-203ENST00000474851 OR10G4Q8NGN3 311 aa5.51□□□□□ -1.53
LSAMP-203ENST00000474851 TMEM167AQ8TBQ9 72 aa5.51□□□□□ -1.53
LSAMP-203ENST00000474851 DTD1Q8TEA8 209 aa5.51□□□□□ -1.53
LSAMP-203ENST00000474851 Q8WTZ3 238 aa5.51□□□□□ -1.53
LSAMP-203ENST00000474851 C2orf50Q96LR7 162 aa5.51□□□□□ -1.53
LSAMP-203ENST00000474851 PYGO2Q9BRQ0 406 aa5.51□□□□□ -1.53
LSAMP-203ENST00000474851 GINS3Q9BRX5 216 aa5.51□□□□□ -1.53
LSAMP-203ENST00000474851 VAX2Q9UIW0 290 aa5.51□□□□□ -1.53
LSAMP-203ENST00000474851 KLK9Q9UKQ9 250 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms