RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 ZNF672Q499Z4 452 aaPredicted RBP4.74□□□□□ -1.65
ATPAF1-204ENST00000474020 PRR30Q53SZ7 412 aaPredicted RBP4.74□□□□□ -1.65
ATPAF1-204ENST00000474020 GCSAMLQ5JQS6 135 aa4.74□□□□□ -1.65
ATPAF1-204ENST00000474020 DNLZQ5SXM8 178 aa4.74□□□□□ -1.65
ATPAF1-204ENST00000474020 C10orf113Q5VZT2 155 aa4.74□□□□□ -1.65
ATPAF1-204ENST00000474020 LINC01551Q86U37 167 aa4.74□□□□□ -1.65
ATPAF1-204ENST00000474020 OR51G1Q8NGK1 321 aa4.74□□□□□ -1.65
ATPAF1-204ENST00000474020 OR1L6Q8NGR2 347 aa4.74□□□□□ -1.65
ATPAF1-204ENST00000474020 C11orf52Q96A22 123 aa4.74□□□□□ -1.65
ATPAF1-204ENST00000474020 PERPQ96FX8 193 aa4.74□□□□□ -1.65
ATPAF1-204ENST00000474020 SFRP2Q96HF1 295 aa4.74□□□□□ -1.65
ATPAF1-204ENST00000474020 SRSF8Q9BRL6 282 aaKnown RBP4.74□□□□□ -1.65
ATPAF1-204ENST00000474020 PYGO2Q9BRQ0 406 aa4.74□□□□□ -1.65
ATPAF1-204ENST00000474020 CHRDL1Q9BU40 450 aa4.74□□□□□ -1.65
ATPAF1-204ENST00000474020 HEATR1Q9H583 2144 aaKnown RBP4.74□□□□□ -1.65
ATPAF1-204ENST00000474020 DNAJC4Q9NNZ3 241 aa4.74□□□□□ -1.65
ATPAF1-204ENST00000474020 DCAF16Q9NXF7 216 aa4.74□□□□□ -1.65
ATPAF1-204ENST00000474020 INSIG2Q9Y5U4 225 aa4.74□□□□□ -1.65
ATPAF1-204ENST00000474020 MYO18BQ8IUG5 2567 aa4.74□□□□□ -1.65
ATPAF1-204ENST00000474020 GTF3C1Q12789 2109 aa4.73□□□□□ -1.65
ATPAF1-204ENST00000474020 TRBV9A0A0B4J1U6 114 aa4.73□□□□□ -1.65
ATPAF1-204ENST00000474020 IGHV2-26A0A0B4J1V2 119 aa4.73□□□□□ -1.65
ATPAF1-204ENST00000474020 A0A0U1RQK1 487 aa4.73□□□□□ -1.65
ATPAF1-204ENST00000474020 A0A1W2PRE2 83 aa4.73□□□□□ -1.65
ATPAF1-204ENST00000474020 TCRBV4S1A1TA0A5B7 111 aa4.73□□□□□ -1.65
ATPAF1-204ENST00000474020 ZNF320A2RRD8 509 aa4.73□□□□□ -1.65
ATPAF1-204ENST00000474020 HELTA6NFD8 242 aa4.73□□□□□ -1.65
ATPAF1-204ENST00000474020 SRRM4A7MD48 611 aaKnown RBP4.73□□□□□ -1.65
ATPAF1-204ENST00000474020 TNFRSF13BO14836 293 aaPredicted RBP4.73□□□□□ -1.65
ATPAF1-204ENST00000474020 SLC25A17O43808 307 aa4.73□□□□□ -1.65
ATPAF1-204ENST00000474020 HIST1H2BKO60814 126 aa4.73□□□□□ -1.65
ATPAF1-204ENST00000474020 HIST1H2BJP06899 126 aa4.73□□□□□ -1.65
ATPAF1-204ENST00000474020 PFN1P07737 140 aaKnown RBP4.73□□□□□ -1.65
ATPAF1-204ENST00000474020 HIST1H2BOP23527 126 aa4.73□□□□□ -1.65
ATPAF1-204ENST00000474020 HIST1H2BBP33778 126 aa4.73□□□□□ -1.65
ATPAF1-204ENST00000474020 DLX6P56179 175 aa4.73□□□□□ -1.65
ATPAF1-204ENST00000474020 HIST1H2BDP58876 126 aa4.73□□□□□ -1.65
ATPAF1-204ENST00000474020 HIST1H2BCP62807 126 aa4.73□□□□□ -1.65
ATPAF1-204ENST00000474020 GAMTQ14353 236 aa4.73□□□□□ -1.65
ATPAF1-204ENST00000474020 HIST2H2BEQ16778 126 aa4.73□□□□□ -1.65
ATPAF1-204ENST00000474020 RPEL1Q2QD12 228 aa4.73□□□□□ -1.65
ATPAF1-204ENST00000474020 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.73□□□□□ -1.65
ATPAF1-204ENST00000474020 LYPD2Q6UXB3 125 aa4.73□□□□□ -1.65
ATPAF1-204ENST00000474020 TMEM183AQ8IXX5 376 aa4.73□□□□□ -1.65
ATPAF1-204ENST00000474020 ZCCHC24Q8N2G6 241 aaKnown RBP4.73□□□□□ -1.65
ATPAF1-204ENST00000474020 OR4X1Q8NH49 305 aa4.73□□□□□ -1.65
ATPAF1-204ENST00000474020 TMEM170AQ8WVE7 144 aa4.73□□□□□ -1.65
ATPAF1-204ENST00000474020 HIST1H2BHQ93079 126 aa4.73□□□□□ -1.65
ATPAF1-204ENST00000474020 HIST1H2BNQ99877 126 aa4.73□□□□□ -1.65
ATPAF1-204ENST00000474020 HIST1H2BMQ99879 126 aa4.73□□□□□ -1.65
ATPAF1-204ENST00000474020 OR51M1Q9H341 326 aa4.73□□□□□ -1.65
ATPAF1-204ENST00000474020 SEPSECSQ9HD40 501 aaKnown RBP4.73□□□□□ -1.65
ATPAF1-204ENST00000474020 NIT2Q9NQR4 276 aa4.73□□□□□ -1.65
ATPAF1-204ENST00000474020 CBLN4Q9NTU7 201 aa4.73□□□□□ -1.65
ATPAF1-204ENST00000474020 ONECUT1Q9UBC0 465 aa4.73□□□□□ -1.65
ATPAF1-204ENST00000474020 CTSZQ9UBR2 303 aa4.73□□□□□ -1.65
ATPAF1-204ENST00000474020 RNF24Q9Y225 148 aa4.73□□□□□ -1.65
ATPAF1-204ENST00000474020 TRAPPC1Q9Y5R8 145 aa4.73□□□□□ -1.65
ATPAF1-204ENST00000474020 ITPR1Q14643 2758 aa4.73□□□□□ -1.65
ATPAF1-204ENST00000474020 LAMA1P25391 3075 aa4.73□□□□□ -1.65
ATPAF1-204ENST00000474020 XKRY2A2RUG3 117 aa4.72□□□□□ -1.65
ATPAF1-204ENST00000474020 BUB1B-PAK6H3BSN5 160 aa4.72□□□□□ -1.65
ATPAF1-204ENST00000474020 M0R1W7 72 aa4.72□□□□□ -1.65
ATPAF1-204ENST00000474020 HYPMO75409 117 aa4.72□□□□□ -1.65
ATPAF1-204ENST00000474020 CNIH1O95406 144 aa4.72□□□□□ -1.65
ATPAF1-204ENST00000474020 IGHV2-70P01814 119 aa4.72□□□□□ -1.65
ATPAF1-204ENST00000474020 MT-ND6P03923 174 aa4.72□□□□□ -1.65
ATPAF1-204ENST00000474020 COX7A1P24310 79 aa4.72□□□□□ -1.65
ATPAF1-204ENST00000474020 TAS2R60P59551 318 aa4.72□□□□□ -1.65
ATPAF1-204ENST00000474020 ERVFC1-1P60608 527 aa4.72□□□□□ -1.65
ATPAF1-204ENST00000474020 PRSS8Q16651 343 aa4.72□□□□□ -1.65
ATPAF1-204ENST00000474020 CCDC144NLQ6NUI1 221 aa4.72□□□□□ -1.65
ATPAF1-204ENST00000474020 WDR73Q6P4I2 378 aa4.72□□□□□ -1.65
ATPAF1-204ENST00000474020 MIR17HGQ75NE6 70 aa4.72□□□□□ -1.65
ATPAF1-204ENST00000474020 Q8N7P7 452 aa4.72□□□□□ -1.65
ATPAF1-204ENST00000474020 THAP8Q8NA92 274 aa4.72□□□□□ -1.65
ATPAF1-204ENST00000474020 ZNF114Q8NC26 417 aa4.72□□□□□ -1.65
ATPAF1-204ENST00000474020 OR5AU1Q8NGC0 362 aa4.72□□□□□ -1.65
ATPAF1-204ENST00000474020 OR1P1Q8NH06 330 aa4.72□□□□□ -1.65
ATPAF1-204ENST00000474020 SGMS2Q8NHU3 365 aa4.72□□□□□ -1.65
ATPAF1-204ENST00000474020 C8orf46Q8TAG6 207 aa4.72□□□□□ -1.65
ATPAF1-204ENST00000474020 LINC01560Q8TB33 94 aa4.72□□□□□ -1.65
ATPAF1-204ENST00000474020 FRZBQ92765 325 aa4.72□□□□□ -1.65
ATPAF1-204ENST00000474020 ST6GALNAC6Q969X2 333 aa4.72□□□□□ -1.65
ATPAF1-204ENST00000474020 TMEM18Q96B42 140 aa4.72□□□□□ -1.65
ATPAF1-204ENST00000474020 PACRGQ96M98 296 aaPredicted RBP4.72□□□□□ -1.65
ATPAF1-204ENST00000474020 BBC3Q96PG8 261 aaPredicted RBP4.72□□□□□ -1.65
ATPAF1-204ENST00000474020 TRGV9Q99603 122 aa4.72□□□□□ -1.65
ATPAF1-204ENST00000474020 SLC25A33Q9BSK2 321 aa4.72□□□□□ -1.65
ATPAF1-204ENST00000474020 PAXXQ9BUH6 204 aa4.72□□□□□ -1.65
ATPAF1-204ENST00000474020 TNFRSF19Q9NS68 423 aa4.72□□□□□ -1.65
ATPAF1-204ENST00000474020 YTHDF2Q9Y5A9 579 aaKnown RBP4.72□□□□□ -1.65
ATPAF1-204ENST00000474020 CNOT1A5YKK6 2376 aaKnown RBP4.72□□□□□ -1.65
ATPAF1-204ENST00000474020 IGF2RP11717 2491 aa4.72□□□□□ -1.65
ATPAF1-204ENST00000474020 ANKRD17O75179 2603 aaKnown RBP4.72□□□□□ -1.65
ATPAF1-204ENST00000474020 SVILO95425 2214 aa4.72□□□□□ -1.65
ATPAF1-204ENST00000474020 TENM4Q6N022 2769 aa4.71□□□□□ -1.65
ATPAF1-204ENST00000474020 DYSFO75923 2080 aa4.71□□□□□ -1.65
ATPAF1-204ENST00000474020 HECTD1Q9ULT8 2610 aa4.71□□□□□ -1.66
ATPAF1-204ENST00000474020 IGHV1-3A0A0C4DH29 117 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms