RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 MIR17HGQ75NE6 70 aa14.27□□□□□ -0.12
SMC4-211ENST00000469858 OR4X1Q8NH49 305 aa14.27□□□□□ -0.12
SMC4-211ENST00000469858 VAX2Q9UIW0 290 aa14.27□□□□□ -0.12
SMC4-211ENST00000469858 A6NDX4 124 aa14.27□□□□□ -0.13
SMC4-211ENST00000469858 CXorf1O96002 111 aa14.27□□□□□ -0.13
SMC4-211ENST00000469858 PMS2P11Q13670 270 aa14.27□□□□□ -0.13
SMC4-211ENST00000469858 DEFB112Q30KQ8 113 aa14.27□□□□□ -0.13
SMC4-211ENST00000469858 CYB5R2Q6BCY4 276 aa14.27□□□□□ -0.13
SMC4-211ENST00000469858 SPNS3Q6ZMD2 512 aa14.27□□□□□ -0.13
SMC4-211ENST00000469858 TMEM37Q8WXS4 190 aa14.27□□□□□ -0.13
SMC4-211ENST00000469858 MANBALQ9NQG1 85 aa14.27□□□□□ -0.13
SMC4-211ENST00000469858 FUT9Q9Y231 359 aa14.27□□□□□ -0.13
SMC4-211ENST00000469858 S4R3C0 116 aa14.27□□□□□ -0.13
SMC4-211ENST00000469858 CREBBPQ92793 2442 aa14.27□□□□□ -0.13
SMC4-211ENST00000469858 GCN1Q92616 2671 aaKnown RBP14.27□□□□□ -0.13
SMC4-211ENST00000469858 OR5G3P0C626 314 aa14.26□□□□□ -0.13
SMC4-211ENST00000469858 PSMB3P49720 205 aa14.26□□□□□ -0.13
SMC4-211ENST00000469858 BPIFB3P59826 476 aa14.26□□□□□ -0.13
SMC4-211ENST00000469858 CIARTQ8N365 385 aaPredicted RBP14.26□□□□□ -0.13
SMC4-211ENST00000469858 CYB561D1Q8N8Q1 229 aa14.26□□□□□ -0.13
SMC4-211ENST00000469858 NANPQ8TBE9 248 aa14.26□□□□□ -0.13
SMC4-211ENST00000469858 PSMB11A5LHX3 300 aa14.25□□□□□ -0.13
SMC4-211ENST00000469858 COX7A2P2O60397 106 aa14.25□□□□□ -0.13
SMC4-211ENST00000469858 IGLC1P0CG04 106 aa14.25□□□□□ -0.13
SMC4-211ENST00000469858 C9orf152Q5JTZ5 239 aa14.25□□□□□ -0.13
SMC4-211ENST00000469858 FAM110DQ8TAY7 271 aaPredicted RBP14.25□□□□□ -0.13
SMC4-211ENST00000469858 C19orf24Q9BVV8 132 aa14.25□□□□□ -0.13
SMC4-211ENST00000469858 PITPNC1Q9UKF7 332 aa14.25□□□□□ -0.13
SMC4-211ENST00000469858 G3V318 75 aa14.25□□□□□ -0.13
SMC4-211ENST00000469858 OR2J3O76001 311 aa14.25□□□□□ -0.13
SMC4-211ENST00000469858 SOHLH1Q5JUK2 328 aa14.25□□□□□ -0.13
SMC4-211ENST00000469858 DNAJC4Q9NNZ3 241 aa14.25□□□□□ -0.13
SMC4-211ENST00000469858 THYN1Q9P016 225 aa14.25□□□□□ -0.13
SMC4-211ENST00000469858 SMAD7O15105 426 aaKnown RBP14.24□□□□□ -0.13
SMC4-211ENST00000469858 PAGE4O60829 102 aa14.24□□□□□ -0.13
SMC4-211ENST00000469858 CLN5O75503 358 aa14.24□□□□□ -0.13
SMC4-211ENST00000469858 FSHBP01225 129 aa14.24□□□□□ -0.13
SMC4-211ENST00000469858 MEF2BQ02080 365 aaPredicted RBP14.24□□□□□ -0.13
SMC4-211ENST00000469858 OR1L4Q8NGR5 311 aa14.24□□□□□ -0.13
SMC4-211ENST00000469858 PFDN5Q99471 154 aa14.24□□□□□ -0.13
SMC4-211ENST00000469858 NKX6-2Q9C056 277 aaPredicted RBP14.24□□□□□ -0.13
SMC4-211ENST00000469858 NDUFB8O95169 186 aa14.23□□□□□ -0.13
SMC4-211ENST00000469858 GCHFRP30047 84 aa14.23□□□□□ -0.13
SMC4-211ENST00000469858 UBE2G2P60604 165 aa14.23□□□□□ -0.13
SMC4-211ENST00000469858 TIGITQ495A1 244 aa14.23□□□□□ -0.13
SMC4-211ENST00000469858 C10orf113Q5VZT2 155 aa14.23□□□□□ -0.13
SMC4-211ENST00000469858 UHRF2Q96PU4 802 aa14.23□□□□□ -0.13
SMC4-211ENST00000469858 SNAPINO95295 136 aa14.23□□□□□ -0.13
SMC4-211ENST00000469858 ORM2P19652 201 aa14.23□□□□□ -0.13
SMC4-211ENST00000469858 TAGLN2P37802 199 aaKnown RBP14.23□□□□□ -0.13
SMC4-211ENST00000469858 CD81P60033 236 aa14.23□□□□□ -0.13
SMC4-211ENST00000469858 PATE2Q6UY27 113 aa14.23□□□□□ -0.13
SMC4-211ENST00000469858 OR1B1Q8NGR6 318 aa14.23□□□□□ -0.13
SMC4-211ENST00000469858 MRPL32Q9BYC8 188 aaKnown RBP14.23□□□□□ -0.13
SMC4-211ENST00000469858 ZNF355PQ9NSJ1 428 aa14.23□□□□□ -0.13
SMC4-211ENST00000469858 TECRQ9NZ01 308 aaKnown RBP14.23□□□□□ -0.13
SMC4-211ENST00000469858 IGHV4-59P01825 116 aa14.22□□□□□ -0.13
SMC4-211ENST00000469858 AKIRIN2Q53H80 203 aa14.22□□□□□ -0.13
SMC4-211ENST00000469858 MORN5Q5VZ52 161 aa14.22□□□□□ -0.13
SMC4-211ENST00000469858 TMEM68Q96MH6 324 aa14.22□□□□□ -0.13
SMC4-211ENST00000469858 RNF2Q99496 336 aa14.22□□□□□ -0.13
SMC4-211ENST00000469858 FBXL7Q9UJT9 491 aa14.22□□□□□ -0.13
SMC4-211ENST00000469858 PDZD2O15018 2839 aa14.22□□□□□ -0.13
SMC4-211ENST00000469858 M0QZK8 103 aa14.22□□□□□ -0.13
SMC4-211ENST00000469858 OR7C2O60412 319 aa14.22□□□□□ -0.13
SMC4-211ENST00000469858 IGKV1-17P01599 117 aa14.22□□□□□ -0.13
SMC4-211ENST00000469858 PSG1P11464 419 aa14.22□□□□□ -0.13
SMC4-211ENST00000469858 NPBWR1P48145 328 aa14.22□□□□□ -0.13
SMC4-211ENST00000469858 MFAP4P55083 255 aa14.22□□□□□ -0.13
SMC4-211ENST00000469858 TAS2R45P59539 299 aa14.22□□□□□ -0.13
SMC4-211ENST00000469858 OR4F5Q8NH21 305 aa14.22□□□□□ -0.13
SMC4-211ENST00000469858 OR4F4Q96R69 305 aa14.22□□□□□ -0.13
SMC4-211ENST00000469858 C21orf62Q9NYP8 219 aa14.22□□□□□ -0.13
SMC4-211ENST00000469858 LINC00527Q9UJ94 153 aa14.22□□□□□ -0.13
SMC4-211ENST00000469858 ITPR3Q14573 2671 aa14.21□□□□□ -0.13
SMC4-211ENST00000469858 ZNF469Q96JG9 3925 aaPredicted RBP14.21□□□□□ -0.13
SMC4-211ENST00000469858 GNG7O60262 68 aa14.21□□□□□ -0.13
SMC4-211ENST00000469858 IGHV3-23P01764 117 aa14.21□□□□□ -0.13
SMC4-211ENST00000469858 C8orf88P0DMB2 117 aa14.21□□□□□ -0.13
SMC4-211ENST00000469858 HIST1H1BP16401 226 aaKnown RBP14.21□□□□□ -0.13
SMC4-211ENST00000469858 BTN1A1Q13410 526 aa14.21□□□□□ -0.13
SMC4-211ENST00000469858 KIAA0141Q14154 515 aaPredicted RBP14.21□□□□□ -0.13
SMC4-211ENST00000469858 Q56UQ5 140 aa14.21□□□□□ -0.13
SMC4-211ENST00000469858 CST9LP1Q5W188 147 aa14.21□□□□□ -0.13
SMC4-211ENST00000469858 CCDC168Q8NDH2 2452 aa14.21□□□□□ -0.14
SMC4-211ENST00000469858 ELOA3CA0A087WX78 387 aaPredicted RBP14.2□□□□□ -0.14
SMC4-211ENST00000469858 TRAV5A0A0B4J249 113 aa14.2□□□□□ -0.14
SMC4-211ENST00000469858 TRAV41A0A0B4J266 112 aa14.2□□□□□ -0.14
SMC4-211ENST00000469858 C11orf94C9JXX5 98 aa14.2□□□□□ -0.14
SMC4-211ENST00000469858 C16orf82Q7Z2V1 217 aa14.2□□□□□ -0.14
SMC4-211ENST00000469858 LINC00305Q7Z4B0 112 aa14.2□□□□□ -0.14
SMC4-211ENST00000469858 FOXC2Q99958 501 aa14.2□□□□□ -0.14
SMC4-211ENST00000469858 PUS1Q9Y606 427 aaKnown RBP eCLIP14.2□□□□□ -0.14
SMC4-211ENST00000469858 IER3P46695 156 aa14.2□□□□□ -0.14
SMC4-211ENST00000469858 LYZP61626 148 aa14.2□□□□□ -0.14
SMC4-211ENST00000469858 BLCAPP62952 87 aa14.2□□□□□ -0.14
SMC4-211ENST00000469858 FAM90A2PQ658T7 463 aa14.2□□□□□ -0.14
SMC4-211ENST00000469858 PQLC2Q6ZP29 291 aa14.2□□□□□ -0.14
SMC4-211ENST00000469858 CLRN3Q8NCR9 226 aa14.2□□□□□ -0.14
SMC4-211ENST00000469858 ZNF503Q96F45 646 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms