RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 PRSS46E5RG02 174 aa9.08□□□□□ -0.96
VPS13D-204ENST00000469054 YIF1AO95070 293 aa9.08□□□□□ -0.96
VPS13D-204ENST00000469054 IGKV1-17P01599 117 aa9.08□□□□□ -0.96
VPS13D-204ENST00000469054 IGLC1P0CG04 106 aa9.08□□□□□ -0.96
VPS13D-204ENST00000469054 FOLR2P14207 255 aa9.08□□□□□ -0.96
VPS13D-204ENST00000469054 PVALBP20472 110 aaPredicted RBP9.08□□□□□ -0.96
VPS13D-204ENST00000469054 ELLP55199 621 aaPredicted RBP9.08□□□□□ -0.96
VPS13D-204ENST00000469054 H2BFSP57053 126 aa9.08□□□□□ -0.96
VPS13D-204ENST00000469054 S100A10P60903 97 aa9.08□□□□□ -0.96
VPS13D-204ENST00000469054 GAMTQ14353 236 aa9.08□□□□□ -0.96
VPS13D-204ENST00000469054 TM4SF20Q53R12 229 aa9.08□□□□□ -0.96
VPS13D-204ENST00000469054 TMEM14EPQ6UXP3 125 aa9.08□□□□□ -0.96
VPS13D-204ENST00000469054 ADAMTSL5Q6ZMM2 481 aa9.08□□□□□ -0.96
VPS13D-204ENST00000469054 ZNF600Q6ZNG1 722 aa9.08□□□□□ -0.96
VPS13D-204ENST00000469054 OR1S2Q8NGQ3 325 aa9.08□□□□□ -0.96
VPS13D-204ENST00000469054 SLC35E1Q96K37 410 aa9.08□□□□□ -0.96
VPS13D-204ENST00000469054 C20orf24Q9BUV8 137 aa9.08□□□□□ -0.96
VPS13D-204ENST00000469054 C11orf1Q9H5F2 150 aa9.08□□□□□ -0.96
VPS13D-204ENST00000469054 MGAT4CQ9UBM8 478 aa9.08□□□□□ -0.96
VPS13D-204ENST00000469054 K7EMT4 169 aa9.07□□□□□ -0.96
VPS13D-204ENST00000469054 IGLV1-51P01701 117 aa9.07□□□□□ -0.96
VPS13D-204ENST00000469054 METTL15P1P0C7V9 234 aa9.07□□□□□ -0.96
VPS13D-204ENST00000469054 EDN2P20800 178 aa9.07□□□□□ -0.96
VPS13D-204ENST00000469054 CBLN1P23435 193 aa9.07□□□□□ -0.96
VPS13D-204ENST00000469054 OR10J1P30954 320 aa9.07□□□□□ -0.96
VPS13D-204ENST00000469054 DEFA6Q01524 100 aa9.07□□□□□ -0.96
VPS13D-204ENST00000469054 TIGITQ495A1 244 aa9.07□□□□□ -0.96
VPS13D-204ENST00000469054 TOMM20LQ6UXN7 152 aa9.07□□□□□ -0.96
VPS13D-204ENST00000469054 MARC2Q969Z3 335 aa9.07□□□□□ -0.96
VPS13D-204ENST00000469054 DAZ1Q9NQZ3 744 aaKnown RBP9.07□□□□□ -0.96
VPS13D-204ENST00000469054 PUS1Q9Y606 427 aaKnown RBP eCLIP9.07□□□□□ -0.96
VPS13D-204ENST00000469054 PKD1L1Q8TDX9 2849 aa9.06□□□□□ -0.96
VPS13D-204ENST00000469054 IGHV3OR16-8A0A075B7F1 116 aa9.06□□□□□ -0.96
VPS13D-204ENST00000469054 RLN2P04090 185 aa9.06□□□□□ -0.96
VPS13D-204ENST00000469054 C8orf88P0DMB2 117 aa9.06□□□□□ -0.96
VPS13D-204ENST00000469054 BCAP31P51572 246 aa9.06□□□□□ -0.96
VPS13D-204ENST00000469054 YPEL3P61236 119 aaPredicted RBP9.06□□□□□ -0.96
VPS13D-204ENST00000469054 OR8G2PQ6IF36 304 aa9.06□□□□□ -0.96
VPS13D-204ENST00000469054 HAPLN4Q86UW8 402 aa9.06□□□□□ -0.96
VPS13D-204ENST00000469054 OR10P1Q8NGE3 313 aa9.06□□□□□ -0.96
VPS13D-204ENST00000469054 DYNLRB2Q8TF09 96 aa9.06□□□□□ -0.96
VPS13D-204ENST00000469054 WDR89Q96FK6 387 aaPredicted RBP9.06□□□□□ -0.96
VPS13D-204ENST00000469054 MED28Q9H204 178 aa9.06□□□□□ -0.96
VPS13D-204ENST00000469054 MRPL27Q9P0M9 148 aaKnown RBP9.06□□□□□ -0.96
VPS13D-204ENST00000469054 FAM24AA6NFZ4 105 aa9.05□□□□□ -0.96
VPS13D-204ENST00000469054 ZFP92A6NM28 416 aa9.05□□□□□ -0.96
VPS13D-204ENST00000469054 DEDDO75618 318 aa9.05□□□□□ -0.96
VPS13D-204ENST00000469054 CCNKO75909 580 aa9.05□□□□□ -0.96
VPS13D-204ENST00000469054 PRB2P02812 416 aaPredicted RBP9.05□□□□□ -0.96
VPS13D-204ENST00000469054 CXCL3P19876 107 aa9.05□□□□□ -0.96
VPS13D-204ENST00000469054 CAV2P51636 162 aa9.05□□□□□ -0.96
VPS13D-204ENST00000469054 FCN2Q15485 313 aa9.05□□□□□ -0.96
VPS13D-204ENST00000469054 DEFB114Q30KQ6 69 aa9.05□□□□□ -0.96
VPS13D-204ENST00000469054 LRRC37A5PQ49AS3 106 aa9.05□□□□□ -0.96
VPS13D-204ENST00000469054 ACOT7LQ6ZUV0 252 aa9.05□□□□□ -0.96
VPS13D-204ENST00000469054 Q8WTZ3 238 aa9.05□□□□□ -0.96
VPS13D-204ENST00000469054 PPP1R1CQ8WVI7 109 aa9.05□□□□□ -0.96
VPS13D-204ENST00000469054 GINS3Q9BRX5 216 aa9.05□□□□□ -0.96
VPS13D-204ENST00000469054 ZFAND3Q9H8U3 227 aa9.05□□□□□ -0.96
VPS13D-204ENST00000469054 LYRM2Q9NU23 88 aaPredicted RBP9.05□□□□□ -0.96
VPS13D-204ENST00000469054 TECRQ9NZ01 308 aaKnown RBP9.05□□□□□ -0.96
VPS13D-204ENST00000469054 IGKV1D-37A0A075B6S9 117 aa9.04□□□□□ -0.96
VPS13D-204ENST00000469054 TRAV14DV4A0A0A6YYC5 116 aa9.04□□□□□ -0.96
VPS13D-204ENST00000469054 H0YIZ8 118 aa9.04□□□□□ -0.96
VPS13D-204ENST00000469054 ZNF207O43670 478 aaKnown RBP9.04□□□□□ -0.96
VPS13D-204ENST00000469054 TOMM40O96008 361 aa9.04□□□□□ -0.96
VPS13D-204ENST00000469054 RD3LP0DJH9 198 aa9.04□□□□□ -0.96
VPS13D-204ENST00000469054 RRAS2P62070 204 aaPredicted RBP9.04□□□□□ -0.96
VPS13D-204ENST00000469054 DLK1P80370 383 aa9.04□□□□□ -0.96
VPS13D-204ENST00000469054 ARL16Q0P5N6 197 aa9.04□□□□□ -0.96
VPS13D-204ENST00000469054 CD300EQ496F6 205 aaPredicted RBP9.04□□□□□ -0.96
VPS13D-204ENST00000469054 TMEM144Q7Z5S9 345 aa9.04□□□□□ -0.96
VPS13D-204ENST00000469054 TMEM252Q8N6L7 170 aa9.04□□□□□ -0.96
VPS13D-204ENST00000469054 THAP8Q8NA92 274 aa9.04□□□□□ -0.96
VPS13D-204ENST00000469054 OR11H7Q8NGC8 314 aa9.04□□□□□ -0.96
VPS13D-204ENST00000469054 OR2K2Q8NGT1 345 aa9.04□□□□□ -0.96
VPS13D-204ENST00000469054 AURKAIP1Q9NWT8 199 aaPredicted RBP9.04□□□□□ -0.96
VPS13D-204ENST00000469054 SMPXQ9UHP9 88 aa9.04□□□□□ -0.96
VPS13D-204ENST00000469054 ZNF256Q9Y2P7 627 aaPredicted RBP9.04□□□□□ -0.96
VPS13D-204ENST00000469054 IGKV1OR2-108A0A075B7D4 117 aa9.03□□□□□ -0.96
VPS13D-204ENST00000469054 IGHV7-4-1A0A0J9YVY3 117 aa9.03□□□□□ -0.96
VPS13D-204ENST00000469054 SMCO3A2RU48 225 aa9.03□□□□□ -0.96
VPS13D-204ENST00000469054 E5RGE8 158 aa9.03□□□□□ -0.96
VPS13D-204ENST00000469054 FNDC10F2Z333 226 aa9.03□□□□□ -0.96
VPS13D-204ENST00000469054 CST7O76096 145 aa9.03□□□□□ -0.96
VPS13D-204ENST00000469054 SCAF4O95104 1147 aaKnown RBP9.03□□□□□ -0.96
VPS13D-204ENST00000469054 PSG1P11464 419 aa9.03□□□□□ -0.96
VPS13D-204ENST00000469054 GP9P14770 177 aa9.03□□□□□ -0.96
VPS13D-204ENST00000469054 ZNF90Q03938 601 aa9.03□□□□□ -0.96
VPS13D-204ENST00000469054 AKR1C1Q04828 323 aa9.03□□□□□ -0.96
VPS13D-204ENST00000469054 LCN12Q6JVE5 192 aa9.03□□□□□ -0.96
VPS13D-204ENST00000469054 BTNL8Q6UX41 500 aa9.03□□□□□ -0.96
VPS13D-204ENST00000469054 TRGV9Q99603 122 aa9.03□□□□□ -0.96
VPS13D-204ENST00000469054 RNF126Q9BV68 326 aa9.03□□□□□ -0.96
VPS13D-204ENST00000469054 GGACTQ9BVM4 153 aa9.03□□□□□ -0.96
VPS13D-204ENST00000469054 NPVFQ9HCQ7 196 aa9.03□□□□□ -0.96
VPS13D-204ENST00000469054 OR5AC2Q9NZP5 309 aa9.03□□□□□ -0.96
VPS13D-204ENST00000469054 MLXQ9UH92 298 aa9.03□□□□□ -0.96
VPS13D-204ENST00000469054 IGSF23A1L1A6 192 aa9.02□□□□□ -0.97
VPS13D-204ENST00000469054 IZUMO1RA6ND01 250 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms