RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 TGFBR1P36897 503 aa2.49□□□□□ -2.01
HMGB1P25-201ENST00000468402 PSMB3P49720 205 aa2.49□□□□□ -2.01
HMGB1P25-201ENST00000468402 CTBP2P56545 445 aa2.49□□□□□ -2.01
HMGB1P25-201ENST00000468402 PIGPP57054 158 aa2.49□□□□□ -2.01
HMGB1P25-201ENST00000468402 CKS1BP61024 79 aa2.49□□□□□ -2.01
HMGB1P25-201ENST00000468402 RBX1P62877 108 aa2.49□□□□□ -2.01
HMGB1P25-201ENST00000468402 SYCNQ0VAF6 134 aa2.49□□□□□ -2.01
HMGB1P25-201ENST00000468402 ESPL1Q14674 2120 aa2.49□□□□□ -2.01
HMGB1P25-201ENST00000468402 RHEBQ15382 184 aa2.49□□□□□ -2.01
HMGB1P25-201ENST00000468402 KCNJ8Q15842 424 aa2.49□□□□□ -2.01
HMGB1P25-201ENST00000468402 NEDD8Q15843 81 aa2.49□□□□□ -2.01
HMGB1P25-201ENST00000468402 SMIM21Q3B7S5 101 aa2.49□□□□□ -2.01
HMGB1P25-201ENST00000468402 ZFP1Q6P2D0 407 aa2.49□□□□□ -2.01
HMGB1P25-201ENST00000468402 MYO7BQ6PIF6 2116 aa2.49□□□□□ -2.01
HMGB1P25-201ENST00000468402 VN1R4Q7Z5H5 301 aa2.49□□□□□ -2.01
HMGB1P25-201ENST00000468402 LINC01551Q86U37 167 aa2.49□□□□□ -2.01
HMGB1P25-201ENST00000468402 PDPNQ86YL7 162 aa2.49□□□□□ -2.01
HMGB1P25-201ENST00000468402 TMEM105Q8N8V8 129 aa2.49□□□□□ -2.01
HMGB1P25-201ENST00000468402 GDPD1Q8N9F7 314 aa2.49□□□□□ -2.01
HMGB1P25-201ENST00000468402 OR4D11Q8NGI4 311 aa2.49□□□□□ -2.01
HMGB1P25-201ENST00000468402 OR5J2Q8NH18 312 aa2.49□□□□□ -2.01
HMGB1P25-201ENST00000468402 TSLPQ969D9 159 aa2.49□□□□□ -2.01
HMGB1P25-201ENST00000468402 MS4A6EQ96DS6 147 aa2.49□□□□□ -2.01
HMGB1P25-201ENST00000468402 ZNF414Q96IQ9 312 aa2.49□□□□□ -2.01
HMGB1P25-201ENST00000468402 C18orf15Q96N68 181 aa2.49□□□□□ -2.01
HMGB1P25-201ENST00000468402 TTTY10Q9BZA0 68 aa2.49□□□□□ -2.01
HMGB1P25-201ENST00000468402 RNASE7Q9H1E1 156 aaKnown RBP2.49□□□□□ -2.01
HMGB1P25-201ENST00000468402 TPT1P8Q9HAU6 139 aa2.49□□□□□ -2.01
HMGB1P25-201ENST00000468402 RBM12B-AS1Q9P1G2 102 aa2.49□□□□□ -2.01
HMGB1P25-201ENST00000468402 NUBP2Q9Y5Y2 271 aa2.49□□□□□ -2.01
HMGB1P25-201ENST00000468402 TMEM14AQ9Y6G1 99 aa2.49□□□□□ -2.01
HMGB1P25-201ENST00000468402 MYO15AQ9UKN7 3530 aa2.49□□□□□ -2.01
HMGB1P25-201ENST00000468402 ZDBF2Q9HCK1 2354 aa2.48□□□□□ -2.01
HMGB1P25-201ENST00000468402 BORCS7-ASMTA0A0B4J1R7 106 aa2.48□□□□□ -2.01
HMGB1P25-201ENST00000468402 A0A0J9YY10 115 aa2.48□□□□□ -2.01
HMGB1P25-201ENST00000468402 SPTY2D1-AS1A0A0U1RR47 76 aa2.48□□□□□ -2.01
HMGB1P25-201ENST00000468402 PNMA8CA0A1B0GUJ8 204 aa2.48□□□□□ -2.01
HMGB1P25-201ENST00000468402 RFPL4AA6NLU0 287 aa2.48□□□□□ -2.01
HMGB1P25-201ENST00000468402 BBIP1A8MTZ0 92 aa2.48□□□□□ -2.01
HMGB1P25-201ENST00000468402 C5orf58C9J3I9 102 aa2.48□□□□□ -2.01
HMGB1P25-201ENST00000468402 RFPL4AL1F8VTS6 287 aa2.48□□□□□ -2.01
HMGB1P25-201ENST00000468402 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P25-201ENST00000468402 H3BSH0 61 aa2.48□□□□□ -2.01
HMGB1P25-201ENST00000468402 BPY2O14599 106 aa2.48□□□□□ -2.01
HMGB1P25-201ENST00000468402 DEGS1O15121 323 aa2.48□□□□□ -2.01
HMGB1P25-201ENST00000468402 CXorf1O96002 111 aa2.48□□□□□ -2.01
HMGB1P25-201ENST00000468402 HLA-DQB1P01920 261 aa2.48□□□□□ -2.01
HMGB1P25-201ENST00000468402 ADRA2AP08913 450 aa2.48□□□□□ -2.01
HMGB1P25-201ENST00000468402 PSG2P11465 335 aa2.48□□□□□ -2.01
HMGB1P25-201ENST00000468402 PPIBP23284 216 aaKnown RBP2.48□□□□□ -2.01
HMGB1P25-201ENST00000468402 S100PP25815 95 aa2.48□□□□□ -2.01
HMGB1P25-201ENST00000468402 GLRXP35754 106 aa2.48□□□□□ -2.01
HMGB1P25-201ENST00000468402 CXCL12P48061 93 aa2.48□□□□□ -2.01
HMGB1P25-201ENST00000468402 DAPP51397 102 aa2.48□□□□□ -2.01
HMGB1P25-201ENST00000468402 LSM3P62310 102 aaKnown RBP2.48□□□□□ -2.01
HMGB1P25-201ENST00000468402 LOXL1Q08397 574 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P25-201ENST00000468402 FUT5Q11128 374 aa2.48□□□□□ -2.01
HMGB1P25-201ENST00000468402 IL15RAQ13261 267 aa2.48□□□□□ -2.01
HMGB1P25-201ENST00000468402 ELOCQ15369 112 aa2.48□□□□□ -2.01
HMGB1P25-201ENST00000468402 GRK1Q15835 563 aa2.48□□□□□ -2.01
HMGB1P25-201ENST00000468402 TMEM241Q24JQ0 296 aa2.48□□□□□ -2.01
HMGB1P25-201ENST00000468402 C2orf83Q53S99 150 aa2.48□□□□□ -2.01
HMGB1P25-201ENST00000468402 C1orf194Q5T5A4 169 aa2.48□□□□□ -2.01
HMGB1P25-201ENST00000468402 TMEM78Q5T7P6 136 aa2.48□□□□□ -2.01
HMGB1P25-201ENST00000468402 Q6ZRU5 148 aa2.48□□□□□ -2.01
HMGB1P25-201ENST00000468402 ARPINQ7Z6K5 226 aa2.48□□□□□ -2.01
HMGB1P25-201ENST00000468402 DEFB125Q8N687 156 aa2.48□□□□□ -2.01
HMGB1P25-201ENST00000468402 ZNF433Q8N7K0 673 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P25-201ENST00000468402 LY6G5BQ8NDX9 201 aa2.48□□□□□ -2.01
HMGB1P25-201ENST00000468402 OR52L1Q8NGH7 329 aa2.48□□□□□ -2.01
HMGB1P25-201ENST00000468402 OR2T27Q8NH04 317 aa2.48□□□□□ -2.01
HMGB1P25-201ENST00000468402 OR1L1Q8NH94 360 aa2.48□□□□□ -2.01
HMGB1P25-201ENST00000468402 FAM104AQ969W3 186 aa2.48□□□□□ -2.01
HMGB1P25-201ENST00000468402 DNAJC30Q96LL9 226 aa2.48□□□□□ -2.01
HMGB1P25-201ENST00000468402 LINC00477Q96M19 166 aa2.48□□□□□ -2.01
HMGB1P25-201ENST00000468402 TMEM147Q9BVK8 224 aa2.48□□□□□ -2.01
HMGB1P25-201ENST00000468402 TMEM126AQ9H061 195 aa2.48□□□□□ -2.01
HMGB1P25-201ENST00000468402 C8orf17Q9NRJ1 99 aa2.48□□□□□ -2.01
HMGB1P25-201ENST00000468402 KCNIP2Q9NS61 270 aa2.48□□□□□ -2.01
HMGB1P25-201ENST00000468402 ZNF355PQ9NSJ1 428 aa2.48□□□□□ -2.01
HMGB1P25-201ENST00000468402 RASL12Q9NYN1 266 aa2.48□□□□□ -2.01
HMGB1P25-201ENST00000468402 ASB4Q9Y574 426 aa2.48□□□□□ -2.01
HMGB1P25-201ENST00000468402 FREM1Q5H8C1 2179 aa2.47□□□□□ -2.01
HMGB1P25-201ENST00000468402 PCNX2A6NKB5 2137 aa2.47□□□□□ -2.01
HMGB1P25-201ENST00000468402 IGLV4-69A0A075B6H9 119 aa2.47□□□□□ -2.01
HMGB1P25-201ENST00000468402 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.47□□□□□ -2.01
HMGB1P25-201ENST00000468402 IGHV3-49A0A0A0MS15 119 aa2.47□□□□□ -2.01
HMGB1P25-201ENST00000468402 TRAV26-2A0A0B4J265 109 aa2.47□□□□□ -2.01
HMGB1P25-201ENST00000468402 IGHV1-69-2A0A0G2JMI3 117 aa2.47□□□□□ -2.01
HMGB1P25-201ENST00000468402 FAM236DA0A1B0GTK5 79 aa2.47□□□□□ -2.01
HMGB1P25-201ENST00000468402 A0A1W2PRE2 83 aa2.47□□□□□ -2.01
HMGB1P25-201ENST00000468402 ZNF98A6NK75 572 aa2.47□□□□□ -2.01
HMGB1P25-201ENST00000468402 OR4C45A6NMZ5 311 aa2.47□□□□□ -2.01
HMGB1P25-201ENST00000468402 ZNF850A8MQ14 1090 aa2.47□□□□□ -2.01
HMGB1P25-201ENST00000468402 KLLNB2CW77 178 aa2.47□□□□□ -2.01
HMGB1P25-201ENST00000468402 UPK1AO00322 258 aa2.47□□□□□ -2.01
HMGB1P25-201ENST00000468402 HMGN4O00479 90 aa2.47□□□□□ -2.01
HMGB1P25-201ENST00000468402 FFAR1O14842 300 aa2.47□□□□□ -2.01
HMGB1P25-201ENST00000468402 BET1O15155 118 aa2.47□□□□□ -2.01
HMGB1P25-201ENST00000468402 GPR75O95800 540 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms