RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 X6R8D5 127 aa16.5■□□□□ 0.23
USP42-205ENST00000465073 IGLC1P0CG04 106 aa16.49■□□□□ 0.23
USP42-205ENST00000465073 SLC25A4P12235 298 aa16.49■□□□□ 0.23
USP42-205ENST00000465073 YPEL3P61236 119 aaPredicted RBP16.49■□□□□ 0.23
USP42-205ENST00000465073 DHRS2Q13268 280 aa16.49■□□□□ 0.23
USP42-205ENST00000465073 STEAP1BQ6NZ63 245 aa16.49■□□□□ 0.23
USP42-205ENST00000465073 PRSS54Q6PEW0 395 aa16.49■□□□□ 0.23
USP42-205ENST00000465073 RNASEH2CQ8TDP1 164 aaKnown RBP16.49■□□□□ 0.23
USP42-205ENST00000465073 RAB40CQ96S21 281 aa16.49■□□□□ 0.23
USP42-205ENST00000465073 TBC1D24Q9ULP9 559 aa16.49■□□□□ 0.23
USP42-205ENST00000465073 AGRNO00468 2067 aa16.49■□□□□ 0.23
USP42-205ENST00000465073 VPS13DQ5THJ4 4388 aa16.49■□□□□ 0.23
USP42-205ENST00000465073 TRAV10A0A0B4J240 114 aa16.48■□□□□ 0.23
USP42-205ENST00000465073 HNRNPCP07910 306 aaKnown RBP eCLIP16.48■□□□□ 0.23
USP42-205ENST00000465073 OR5AC1P0C628 307 aa16.48■□□□□ 0.23
USP42-205ENST00000465073 RND2P52198 227 aa16.48■□□□□ 0.23
USP42-205ENST00000465073 C2orf83Q53S99 150 aa16.48■□□□□ 0.23
USP42-205ENST00000465073 C16orf54Q6UWD8 224 aa16.48■□□□□ 0.23
USP42-205ENST00000465073 CSNK1G2-AS1Q8NCQ2 148 aa16.48■□□□□ 0.23
USP42-205ENST00000465073 GLYATL2Q8WU03 294 aa16.48■□□□□ 0.23
USP42-205ENST00000465073 RBPMSQ93062 196 aaKnown RBP16.48■□□□□ 0.23
USP42-205ENST00000465073 C14orf166Q9Y224 244 aaKnown RBP16.48■□□□□ 0.23
USP42-205ENST00000465073 ELOA3CA0A087WX78 387 aaPredicted RBP16.48■□□□□ 0.23
USP42-205ENST00000465073 TEX13DA0A0J9YY54 714 aaPredicted RBP16.48■□□□□ 0.23
USP42-205ENST00000465073 OR10J1P30954 320 aa16.48■□□□□ 0.23
USP42-205ENST00000465073 CTF1Q16619 201 aa16.48■□□□□ 0.23
USP42-205ENST00000465073 GLMPQ8WWB7 406 aa16.48■□□□□ 0.23
USP42-205ENST00000465073 CLEC5AQ9NY25 188 aa16.48■□□□□ 0.23
USP42-205ENST00000465073 HERC2O95714 4834 aa16.47■□□□□ 0.23
USP42-205ENST00000465073 GABARAPH6UMI1 98 aa16.47■□□□□ 0.23
USP42-205ENST00000465073 GABARAPO95166 117 aa16.47■□□□□ 0.23
USP42-205ENST00000465073 DHODHQ02127 395 aa16.47■□□□□ 0.23
USP42-205ENST00000465073 SSBP1Q04837 148 aaKnown RBP16.47■□□□□ 0.23
USP42-205ENST00000465073 MEF2DQ14814 521 aa16.47■□□□□ 0.23
USP42-205ENST00000465073 PSMG4Q5JS54 123 aa16.47■□□□□ 0.23
USP42-205ENST00000465073 Q6ZTC4 211 aa16.47■□□□□ 0.23
USP42-205ENST00000465073 RTBDNQ9BSG5 229 aaPredicted RBP16.47■□□□□ 0.23
USP42-205ENST00000465073 CACNG5Q9UF02 275 aa16.47■□□□□ 0.23
USP42-205ENST00000465073 ETFRF1Q6IPR1 90 aa16.46■□□□□ 0.23
USP42-205ENST00000465073 SELENOHQ8IZQ5 122 aaKnown RBP16.46■□□□□ 0.23
USP42-205ENST00000465073 SLC24A4Q8NFF2 622 aa16.46■□□□□ 0.23
USP42-205ENST00000465073 LHFPL5Q8TAF8 219 aa16.46■□□□□ 0.23
USP42-205ENST00000465073 NAA50Q9GZZ1 169 aaKnown RBP16.46■□□□□ 0.23
USP42-205ENST00000465073 NAA60Q9H7X0 242 aa16.46■□□□□ 0.23
USP42-205ENST00000465073 SEPSECSQ9HD40 501 aaKnown RBP16.46■□□□□ 0.23
USP42-205ENST00000465073 CACFD1Q9UGQ2 172 aa16.46■□□□□ 0.23
USP42-205ENST00000465073 IGHV4-4A0A075B6R2 117 aa16.45■□□□□ 0.22
USP42-205ENST00000465073 CEBPZOSA8MTT3 80 aa16.45■□□□□ 0.22
USP42-205ENST00000465073 SNRPD3P62318 126 aaKnown RBP16.45■□□□□ 0.22
USP42-205ENST00000465073 SURF2Q15527 256 aaPredicted RBP16.45■□□□□ 0.22
USP42-205ENST00000465073 GPR146Q96CH1 333 aa16.45■□□□□ 0.22
USP42-205ENST00000465073 RNF126Q9BV68 326 aa16.45■□□□□ 0.22
USP42-205ENST00000465073 C1QTNF4Q9BXJ3 329 aa16.45■□□□□ 0.22
USP42-205ENST00000465073 NUTF2P61970 127 aaKnown RBP16.44■□□□□ 0.22
USP42-205ENST00000465073 MRPS10P82664 201 aaKnown RBP16.44■□□□□ 0.22
USP42-205ENST00000465073 NOXA1Q86UR1 476 aa16.44■□□□□ 0.22
USP42-205ENST00000465073 FAM90A26D6RGX4 464 aa16.43■□□□□ 0.22
USP42-205ENST00000465073 IL4P05112 153 aa16.43■□□□□ 0.22
USP42-205ENST00000465073 USF2Q15853 346 aaPredicted RBP16.43■□□□□ 0.22
USP42-205ENST00000465073 GPR107Q5VW38 600 aa16.43■□□□□ 0.22
USP42-205ENST00000465073 NPIPB3Q92617 1050 aa16.43■□□□□ 0.22
USP42-205ENST00000465073 NRN1Q9NPD7 142 aa16.43■□□□□ 0.22
USP42-205ENST00000465073 DISC1C4P0D8 188 aa16.42■□□□□ 0.22
USP42-205ENST00000465073 GSTZ1O43708 216 aaPredicted RBP16.42■□□□□ 0.22
USP42-205ENST00000465073 RD3LP0DJH9 198 aa16.42■□□□□ 0.22
USP42-205ENST00000465073 TMEM268Q5VZI3 342 aa16.42■□□□□ 0.22
USP42-205ENST00000465073 FAAP20Q6NZ36 180 aa16.42■□□□□ 0.22
USP42-205ENST00000465073 TMEM170AQ8WVE7 144 aa16.42■□□□□ 0.22
USP42-205ENST00000465073 CRYM-AS1A6NIL9 109 aa16.42■□□□□ 0.22
USP42-205ENST00000465073 BUB3O43684 328 aa16.42■□□□□ 0.22
USP42-205ENST00000465073 TOMM40O96008 361 aa16.42■□□□□ 0.22
USP42-205ENST00000465073 NPY1RP25929 384 aa16.42■□□□□ 0.22
USP42-205ENST00000465073 MIXL1Q9H2W2 232 aa16.42■□□□□ 0.22
USP42-205ENST00000465073 GPR132Q9UNW8 380 aa16.42■□□□□ 0.22
USP42-205ENST00000465073 TMEM56-RWDD3S4R434 201 aa16.42■□□□□ 0.22
USP42-205ENST00000465073 H3BMM0 161 aa16.41■□□□□ 0.22
USP42-205ENST00000465073 C12orf74Q32Q52 190 aa16.41■□□□□ 0.22
USP42-205ENST00000465073 SIGLEC15Q6ZMC9 328 aa16.41■□□□□ 0.22
USP42-205ENST00000465073 ACY3Q96HD9 319 aa16.41■□□□□ 0.22
USP42-205ENST00000465073 XCL2Q9UBD3 114 aa16.41■□□□□ 0.22
USP42-205ENST00000465073 CELA1Q9UNI1 258 aa16.41■□□□□ 0.22
USP42-205ENST00000465073 HECTD4Q9Y4D8 3996 aa16.4■□□□□ 0.22
USP42-205ENST00000465073 DEFB131BA0A096LNP1 70 aa16.4■□□□□ 0.22
USP42-205ENST00000465073 RGS5O15539 181 aa16.4■□□□□ 0.22
USP42-205ENST00000465073 NXPH3O95157 252 aa16.4■□□□□ 0.22
USP42-205ENST00000465073 NMSQ5H8A3 153 aa16.4■□□□□ 0.22
USP42-205ENST00000465073 SMIM4Q8WVI0 70 aa16.4■□□□□ 0.22
USP42-205ENST00000465073 DNAH6Q9C0G6 4158 aa16.39■□□□□ 0.21
USP42-205ENST00000465073 AMBPP02760 352 aa16.39■□□□□ 0.21
USP42-205ENST00000465073 AKAIN1P0CW23 69 aa16.39■□□□□ 0.21
USP42-205ENST00000465073 SULT1A3P0DMM9 295 aa16.39■□□□□ 0.21
USP42-205ENST00000465073 SULT1A4P0DMN0 295 aa16.39■□□□□ 0.21
USP42-205ENST00000465073 LINC00336Q6ZUF6 198 aa16.39■□□□□ 0.21
USP42-205ENST00000465073 IL22RA2Q969J5 263 aa16.39■□□□□ 0.21
USP42-205ENST00000465073 KCNIP3Q9Y2W7 256 aa16.39■□□□□ 0.21
USP42-205ENST00000465073 PSG1P11464 419 aa16.38■□□□□ 0.21
USP42-205ENST00000465073 NUP62P37198 522 aaPredicted RBP16.38■□□□□ 0.21
USP42-205ENST00000465073 PRRT1Q99946 306 aa16.38■□□□□ 0.21
USP42-205ENST00000465073 PFDN2Q9UHV9 154 aa16.38■□□□□ 0.21
USP42-205ENST00000465073 U3KQ87 197 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms