RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 MRPL27Q9P0M9 148 aaKnown RBP15.07■□□□□ 0
COL9A3-204ENST00000463487 TMEM213A2RRL7 107 aa15.06■□□□□ 0
COL9A3-204ENST00000463487 ZFP92A6NM28 416 aa15.06■□□□□ 0
COL9A3-204ENST00000463487 K7EMT4 169 aa15.06■□□□□ 0
COL9A3-204ENST00000463487 SIX6O95475 246 aa15.06■□□□□ 0
COL9A3-204ENST00000463487 IGLV1-51P01701 117 aa15.06■□□□□ 0
COL9A3-204ENST00000463487 IGLC1P0CG04 106 aa15.06■□□□□ 0
COL9A3-204ENST00000463487 CBLN1P23435 193 aa15.06■□□□□ 0
COL9A3-204ENST00000463487 CAV2P51636 162 aa15.06■□□□□ 0
COL9A3-204ENST00000463487 DEFA6Q01524 100 aa15.06■□□□□ 0
COL9A3-204ENST00000463487 RAB32Q13637 225 aa15.06■□□□□ 0
COL9A3-204ENST00000463487 OXA1LQ15070 435 aa15.06■□□□□ 0
COL9A3-204ENST00000463487 OR8G2PQ6IF36 304 aa15.06■□□□□ 0
COL9A3-204ENST00000463487 Q8WTZ3 238 aa15.06■□□□□ 0
COL9A3-204ENST00000463487 MED28Q9H204 178 aa15.06■□□□□ 0
COL9A3-204ENST00000463487 MRPL36Q9P0J6 103 aaKnown RBP15.06■□□□□ 0
COL9A3-204ENST00000463487 PUS1Q9Y606 427 aaKnown RBP eCLIP15.06■□□□□ 0
COL9A3-204ENST00000463487 METTL15P1P0C7V9 234 aa15.05■□□□□ -0
COL9A3-204ENST00000463487 PAX9P55771 341 aa15.05■□□□□ -0
COL9A3-204ENST00000463487 YPEL3P61236 119 aaPredicted RBP15.05■□□□□ -0
COL9A3-204ENST00000463487 AKR1C1Q04828 323 aa15.05■□□□□ -0
COL9A3-204ENST00000463487 IL15RAQ13261 267 aa15.05■□□□□ -0
COL9A3-204ENST00000463487 GAMTQ14353 236 aa15.05■□□□□ -0
COL9A3-204ENST00000463487 TM4SF20Q53R12 229 aa15.05■□□□□ -0
COL9A3-204ENST00000463487 TMEM14EPQ6UXP3 125 aa15.05■□□□□ -0
COL9A3-204ENST00000463487 ZNF256Q9Y2P7 627 aaPredicted RBP15.05■□□□□ -0
COL9A3-204ENST00000463487 CMYA5Q8N3K9 4069 aa15.04■□□□□ -0
COL9A3-204ENST00000463487 TIGITQ495A1 244 aa15.04■□□□□ -0
COL9A3-204ENST00000463487 NARS2Q96I59 477 aaKnown RBP15.04■□□□□ -0
COL9A3-204ENST00000463487 NBEAL1Q6ZS30 2694 aa15.04■□□□□ -0
COL9A3-204ENST00000463487 FBN3Q75N90 2809 aa15.03■□□□□ -0
COL9A3-204ENST00000463487 TRAV14DV4A0A0A6YYC5 116 aa15.03■□□□□ -0
COL9A3-204ENST00000463487 DEDDO75618 318 aa15.03■□□□□ -0
COL9A3-204ENST00000463487 IGKV1-17P01599 117 aa15.03■□□□□ -0
COL9A3-204ENST00000463487 H2BFSP57053 126 aa15.03■□□□□ -0
COL9A3-204ENST00000463487 DLK1P80370 383 aa15.03■□□□□ -0
COL9A3-204ENST00000463487 LRRC37A5PQ49AS3 106 aa15.03■□□□□ -0
COL9A3-204ENST00000463487 TOMM20LQ6UXN7 152 aa15.03■□□□□ -0
COL9A3-204ENST00000463487 ACOT7LQ6ZUV0 252 aa15.03■□□□□ -0
COL9A3-204ENST00000463487 STX12Q86Y82 276 aa15.03■□□□□ -0
COL9A3-204ENST00000463487 GGACTQ9BVM4 153 aa15.03■□□□□ -0
COL9A3-204ENST00000463487 SMCO3A2RU48 225 aa15.02■□□□□ -0
COL9A3-204ENST00000463487 PRSS46E5RG02 174 aa15.02■□□□□ -0
COL9A3-204ENST00000463487 E5RGE8 158 aa15.02■□□□□ -0
COL9A3-204ENST00000463487 FNDC10F2Z333 226 aa15.02■□□□□ -0
COL9A3-204ENST00000463487 RD3LP0DJH9 198 aa15.02■□□□□ -0
COL9A3-204ENST00000463487 KRTAP10-11P60412 298 aa15.02■□□□□ -0
COL9A3-204ENST00000463487 METTL26Q96S19 204 aa15.02■□□□□ -0
COL9A3-204ENST00000463487 TMEM231Q9H6L2 316 aa15.02■□□□□ -0
COL9A3-204ENST00000463487 LYRM2Q9NU23 88 aaPredicted RBP15.02■□□□□ -0
COL9A3-204ENST00000463487 AURKAIP1Q9NWT8 199 aaPredicted RBP15.02■□□□□ -0
COL9A3-204ENST00000463487 IGHV3OR16-8A0A075B7F1 116 aa15.01□□□□□ -0.01
COL9A3-204ENST00000463487 TOMM40O96008 361 aa15.01□□□□□ -0.01
COL9A3-204ENST00000463487 C8orf88P0DMB2 117 aa15.01□□□□□ -0.01
COL9A3-204ENST00000463487 HBG1P69891 147 aa15.01□□□□□ -0.01
COL9A3-204ENST00000463487 HBG2P69892 147 aa15.01□□□□□ -0.01
COL9A3-204ENST00000463487 DEFB114Q30KQ6 69 aa15.01□□□□□ -0.01
COL9A3-204ENST00000463487 HAPLN4Q86UW8 402 aa15.01□□□□□ -0.01
COL9A3-204ENST00000463487 PPP1R1CQ8WVI7 109 aa15.01□□□□□ -0.01
COL9A3-204ENST00000463487 TRGV9Q99603 122 aa15.01□□□□□ -0.01
COL9A3-204ENST00000463487 SLC25A31Q9H0C2 315 aa15.01□□□□□ -0.01
COL9A3-204ENST00000463487 PFDN2Q9UHV9 154 aa15.01□□□□□ -0.01
COL9A3-204ENST00000463487 NOTCH1P46531 2555 aa15□□□□□ -0.01
COL9A3-204ENST00000463487 IGHV7-4-1A0A0J9YVY3 117 aa15□□□□□ -0.01
COL9A3-204ENST00000463487 ZNF207O43670 478 aaKnown RBP15□□□□□ -0.01
COL9A3-204ENST00000463487 CFDP00746 253 aaPredicted RBP15□□□□□ -0.01
COL9A3-204ENST00000463487 NPPCP23582 126 aa15□□□□□ -0.01
COL9A3-204ENST00000463487 CD300EQ496F6 205 aaPredicted RBP15□□□□□ -0.01
COL9A3-204ENST00000463487 LAMTOR1Q6IAA8 161 aa15□□□□□ -0.01
COL9A3-204ENST00000463487 BTNL8Q6UX41 500 aa15□□□□□ -0.01
COL9A3-204ENST00000463487 RBPMS2Q6ZRY4 209 aaKnown RBP15□□□□□ -0.01
COL9A3-204ENST00000463487 TMEM144Q7Z5S9 345 aa15□□□□□ -0.01
COL9A3-204ENST00000463487 THAP8Q8NA92 274 aa15□□□□□ -0.01
COL9A3-204ENST00000463487 OR51G1Q8NGK1 321 aa15□□□□□ -0.01
COL9A3-204ENST00000463487 ASB13Q8WXK3 278 aa15□□□□□ -0.01
COL9A3-204ENST00000463487 ZFAND3Q9H8U3 227 aa15□□□□□ -0.01
COL9A3-204ENST00000463487 A0A1W2PS18 150 aa14.99□□□□□ -0.01
COL9A3-204ENST00000463487 PMS2P5A8MQ11 134 aa14.99□□□□□ -0.01
COL9A3-204ENST00000463487 CD5P06127 495 aa14.99□□□□□ -0.01
COL9A3-204ENST00000463487 GP9P14770 177 aa14.99□□□□□ -0.01
COL9A3-204ENST00000463487 P2RY1P47900 373 aa14.99□□□□□ -0.01
COL9A3-204ENST00000463487 SULT1A1P50225 295 aa14.99□□□□□ -0.01
COL9A3-204ENST00000463487 RRAS2P62070 204 aaPredicted RBP14.99□□□□□ -0.01
COL9A3-204ENST00000463487 ADAMTSL5Q6ZMM2 481 aa14.99□□□□□ -0.01
COL9A3-204ENST00000463487 LILRB2Q8N423 598 aa14.99□□□□□ -0.01
COL9A3-204ENST00000463487 C11orf1Q9H5F2 150 aa14.99□□□□□ -0.01
COL9A3-204ENST00000463487 NPVFQ9HCQ7 196 aa14.99□□□□□ -0.01
COL9A3-204ENST00000463487 SMPXQ9UHP9 88 aa14.99□□□□□ -0.01
COL9A3-204ENST00000463487 TRAV25A0A0B4J276 109 aa14.98□□□□□ -0.01
COL9A3-204ENST00000463487 FAM24AA6NFZ4 105 aa14.98□□□□□ -0.01
COL9A3-204ENST00000463487 PRB2P02812 416 aaPredicted RBP14.98□□□□□ -0.01
COL9A3-204ENST00000463487 IL4P05112 153 aa14.98□□□□□ -0.01
COL9A3-204ENST00000463487 PSG1P11464 419 aa14.98□□□□□ -0.01
COL9A3-204ENST00000463487 S100A11P31949 105 aa14.98□□□□□ -0.01
COL9A3-204ENST00000463487 NUP62P37198 522 aaPredicted RBP14.98□□□□□ -0.01
COL9A3-204ENST00000463487 SLC38A11Q08AI6 406 aa14.98□□□□□ -0.01
COL9A3-204ENST00000463487 GTSCR1Q86UQ5 136 aa14.98□□□□□ -0.01
COL9A3-204ENST00000463487 TMEM252Q8N6L7 170 aa14.98□□□□□ -0.01
COL9A3-204ENST00000463487 GRAMD2BQ96HH9 432 aa14.98□□□□□ -0.01
COL9A3-204ENST00000463487 MLXQ9UH92 298 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 134.7 ms