RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 NDFIP1Q9BT67 221 aa11.12□□□□□ -0.63
PTPRE-204ENST00000455661 FAM186AA6NE01 2351 aa11.11□□□□□ -0.63
PTPRE-204ENST00000455661 IGKV1-16P04430 117 aa11.11□□□□□ -0.63
PTPRE-204ENST00000455661 SP9P0CG40 484 aa11.11□□□□□ -0.63
PTPRE-204ENST00000455661 SAA1P0DJI8 122 aaPredicted RBP11.11□□□□□ -0.63
PTPRE-204ENST00000455661 CT45A6P0DMU7 189 aa11.11□□□□□ -0.63
PTPRE-204ENST00000455661 CT45A5P0DMU8 189 aa11.11□□□□□ -0.63
PTPRE-204ENST00000455661 CT45A7P0DMV0 189 aa11.11□□□□□ -0.63
PTPRE-204ENST00000455661 PRR31Q5SQ13 230 aa11.11□□□□□ -0.63
PTPRE-204ENST00000455661 A0A087X0K7 114 aa11.1□□□□□ -0.63
PTPRE-204ENST00000455661 TCRBV4S1A1TA0A5B7 111 aa11.1□□□□□ -0.63
PTPRE-204ENST00000455661 ACP1P24666 158 aa11.1□□□□□ -0.63
PTPRE-204ENST00000455661 PATE2Q6UY27 113 aa11.1□□□□□ -0.63
PTPRE-204ENST00000455661 RBPMS2Q6ZRY4 209 aaKnown RBP11.1□□□□□ -0.63
PTPRE-204ENST00000455661 C1orf162Q8NEQ5 155 aaPredicted RBP11.1□□□□□ -0.63
PTPRE-204ENST00000455661 MAFAQ8NHW3 353 aaPredicted RBP11.1□□□□□ -0.63
PTPRE-204ENST00000455661 SGK494Q96LW2 274 aa11.1□□□□□ -0.63
PTPRE-204ENST00000455661 SPRY4Q9C004 299 aa11.1□□□□□ -0.63
PTPRE-204ENST00000455661 GFRA4Q9GZZ7 299 aa11.1□□□□□ -0.63
PTPRE-204ENST00000455661 RPH3ALQ9UNE2 315 aa11.1□□□□□ -0.63
PTPRE-204ENST00000455661 KLF12Q9Y4X4 402 aa11.1□□□□□ -0.63
PTPRE-204ENST00000455661 PGPA6NDG6 321 aa11.1□□□□□ -0.63
PTPRE-204ENST00000455661 C9orf172C9J069 976 aa11.1□□□□□ -0.63
PTPRE-204ENST00000455661 H0Y8G0 127 aa11.1□□□□□ -0.63
PTPRE-204ENST00000455661 CD24P25063 80 aa11.1□□□□□ -0.63
PTPRE-204ENST00000455661 MYCNOSP40205 109 aa11.1□□□□□ -0.63
PTPRE-204ENST00000455661 ALKBH2Q6NS38 261 aa11.1□□□□□ -0.63
PTPRE-204ENST00000455661 LINC00305Q7Z4B0 112 aa11.1□□□□□ -0.63
PTPRE-204ENST00000455661 MOGAT3Q86VF5 341 aa11.1□□□□□ -0.63
PTPRE-204ENST00000455661 TMEM105Q8N8V8 129 aa11.1□□□□□ -0.63
PTPRE-204ENST00000455661 BLNKQ8WV28 456 aa11.1□□□□□ -0.63
PTPRE-204ENST00000455661 PRSS22Q9GZN4 317 aa11.1□□□□□ -0.63
PTPRE-204ENST00000455661 LOC102724200A0A096LPH7 203 aaPredicted RBP11.09□□□□□ -0.63
PTPRE-204ENST00000455661 MOSP00540 346 aa11.09□□□□□ -0.63
PTPRE-204ENST00000455661 ZNF137PP52743 207 aa11.09□□□□□ -0.63
PTPRE-204ENST00000455661 SSBP2P81877 361 aaPredicted RBP11.09□□□□□ -0.63
PTPRE-204ENST00000455661 RNFT1Q5M7Z0 435 aa11.09□□□□□ -0.63
PTPRE-204ENST00000455661 H1FXQ92522 213 aaKnown RBP11.09□□□□□ -0.63
PTPRE-204ENST00000455661 NPIPB3Q92617 1050 aa11.09□□□□□ -0.63
PTPRE-204ENST00000455661 FMC1Q96HJ9 113 aa11.09□□□□□ -0.63
PTPRE-204ENST00000455661 NDUFA4L2Q9NRX3 87 aa11.09□□□□□ -0.63
PTPRE-204ENST00000455661 ZNF492Q9P255 531 aa11.09□□□□□ -0.63
PTPRE-204ENST00000455661 SUB1P53999 127 aaKnown RBP eCLIP11.09□□□□□ -0.63
PTPRE-204ENST00000455661 TMEM177Q53S58 311 aa11.09□□□□□ -0.63
PTPRE-204ENST00000455661 BPIFA4PQ86YQ2 179 aa11.09□□□□□ -0.63
PTPRE-204ENST00000455661 OSR1Q8TAX0 266 aaPredicted RBP11.09□□□□□ -0.63
PTPRE-204ENST00000455661 GTSF1Q8WW33 167 aa11.09□□□□□ -0.63
PTPRE-204ENST00000455661 PERPQ96FX8 193 aa11.09□□□□□ -0.63
PTPRE-204ENST00000455661 MLST8Q9BVC4 326 aa11.09□□□□□ -0.63
PTPRE-204ENST00000455661 ZNF835Q9Y2P0 537 aa11.09□□□□□ -0.63
PTPRE-204ENST00000455661 TRAV8-6A0A0B4J262 113 aa11.08□□□□□ -0.64
PTPRE-204ENST00000455661 C7orf71A4D174 169 aa11.08□□□□□ -0.64
PTPRE-204ENST00000455661 GAGE10A6NGK3 116 aa11.08□□□□□ -0.64
PTPRE-204ENST00000455661 APOA2P02652 100 aa11.08□□□□□ -0.64
PTPRE-204ENST00000455661 ARF6P62330 175 aa11.08□□□□□ -0.64
PTPRE-204ENST00000455661 SEC11AP67812 179 aa11.08□□□□□ -0.64
PTPRE-204ENST00000455661 FER1L6-AS2Q96M78 137 aa11.08□□□□□ -0.64
PTPRE-204ENST00000455661 AP1S3Q96PC3 154 aa11.08□□□□□ -0.64
PTPRE-204ENST00000455661 FREM2Q5SZK8 3169 aa11.08□□□□□ -0.64
PTPRE-204ENST00000455661 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.08□□□□□ -0.64
PTPRE-204ENST00000455661 FAM231BA6NCW3 169 aa11.08□□□□□ -0.64
PTPRE-204ENST00000455661 IGLV1-44P01699 117 aa11.08□□□□□ -0.64
PTPRE-204ENST00000455661 COX8AP10176 69 aa11.08□□□□□ -0.64
PTPRE-204ENST00000455661 TMEM30BQ3MIR4 351 aa11.08□□□□□ -0.64
PTPRE-204ENST00000455661 TMEM164Q5U3C3 297 aa11.08□□□□□ -0.64
PTPRE-204ENST00000455661 SLC25A48Q6ZT89 311 aaKnown RBP11.08□□□□□ -0.64
PTPRE-204ENST00000455661 GTF2H5Q6ZYL4 71 aa11.08□□□□□ -0.64
PTPRE-204ENST00000455661 HARBI1Q96MB7 349 aa11.08□□□□□ -0.64
PTPRE-204ENST00000455661 IGHV1-18A0A0C4DH31 117 aa11.07□□□□□ -0.64
PTPRE-204ENST00000455661 C19orf71A6NCJ1 209 aa11.07□□□□□ -0.64
PTPRE-204ENST00000455661 INS-IGF2F8WCM5 200 aa11.07□□□□□ -0.64
PTPRE-204ENST00000455661 PLAUP00749 431 aa11.07□□□□□ -0.64
PTPRE-204ENST00000455661 IGLC1P0CG04 106 aa11.07□□□□□ -0.64
PTPRE-204ENST00000455661 HTR1DP28221 377 aa11.07□□□□□ -0.64
PTPRE-204ENST00000455661 LINC01545Q5VT33 79 aa11.07□□□□□ -0.64
PTPRE-204ENST00000455661 PEAR1Q5VY43 1037 aaPredicted RBP11.07□□□□□ -0.64
PTPRE-204ENST00000455661 LINC00322Q6ZN03 302 aaPredicted RBP11.07□□□□□ -0.64
PTPRE-204ENST00000455661 TMEM178AQ8NBL3 297 aa11.07□□□□□ -0.64
PTPRE-204ENST00000455661 RND1Q92730 232 aa11.07□□□□□ -0.64
PTPRE-204ENST00000455661 MCRIP2Q9BUT9 160 aaKnown RBP11.07□□□□□ -0.64
PTPRE-204ENST00000455661 TIMM8BQ9Y5J9 83 aaPredicted RBP11.07□□□□□ -0.64
PTPRE-204ENST00000455661 FSTL3O95633 263 aa11.07□□□□□ -0.64
PTPRE-204ENST00000455661 LHBP01229 141 aa11.07□□□□□ -0.64
PTPRE-204ENST00000455661 LTAP01374 205 aa11.07□□□□□ -0.64
PTPRE-204ENST00000455661 THAP8Q8NA92 274 aa11.07□□□□□ -0.64
PTPRE-204ENST00000455661 C5orf17Q8NAS9 161 aa11.07□□□□□ -0.64
PTPRE-204ENST00000455661 MEGF9Q9H1U4 602 aa11.07□□□□□ -0.64
PTPRE-204ENST00000455661 NBEAP1P0C6P0 100 aa11.06□□□□□ -0.64
PTPRE-204ENST00000455661 ORM2P19652 201 aa11.06□□□□□ -0.64
PTPRE-204ENST00000455661 ZNF138P52744 262 aa11.06□□□□□ -0.64
PTPRE-204ENST00000455661 TMEM97Q5BJF2 176 aa11.06□□□□□ -0.64
PTPRE-204ENST00000455661 FNDC4Q9H6D8 234 aaPredicted RBP11.06□□□□□ -0.64
PTPRE-204ENST00000455661 FRYLO94915 3013 aa11.06□□□□□ -0.64
PTPRE-204ENST00000455661 HAX1O00165 279 aa11.06□□□□□ -0.64
PTPRE-204ENST00000455661 KIR2DL2P43627 348 aaPredicted RBP11.06□□□□□ -0.64
PTPRE-204ENST00000455661 OR1B1Q8NGR6 318 aa11.06□□□□□ -0.64
PTPRE-204ENST00000455661 RPUSD1Q9UJJ7 312 aaKnown RBP11.06□□□□□ -0.64
PTPRE-204ENST00000455661 IGKV1D-37A0A075B6S9 117 aa11.05□□□□□ -0.64
PTPRE-204ENST00000455661 TM4SF5O14894 197 aa11.05□□□□□ -0.64
PTPRE-204ENST00000455661 SPRY3O43610 288 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms