RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, human

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1-210	ENST00000449058	TPPP2	P59282	170 aa		13.58	□□□□□ -0.24
TOM1-210	ENST00000449058	RBPJ	Q06330	500 aa		13.58	□□□□□ -0.24
TOM1-210	ENST00000449058	RUSC1-AS1	Q66K80	236 aa		13.58	□□□□□ -0.24
TOM1-210	ENST00000449058	PLXNB1	O43157	2135 aa		13.58	□□□□□ -0.24
TOM1-210	ENST00000449058	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	13.58	□□□□□ -0.24
TOM1-210	ENST00000449058	CD3E	P07766	207 aa		13.58	□□□□□ -0.24
TOM1-210	ENST00000449058	MYCNOS	P40205	109 aa		13.58	□□□□□ -0.24
TOM1-210	ENST00000449058	RAN	P62826	216 aa	Known RBP	13.58	□□□□□ -0.24
TOM1-210	ENST00000449058	APC2	O95996	2303 aa		13.57	□□□□□ -0.24
TOM1-210	ENST00000449058	PIEZO2	Q9H5I5	2752 aa		13.57	□□□□□ -0.24
TOM1-210	ENST00000449058	KALRN	O60229	2985 aa		13.57	□□□□□ -0.24
TOM1-210	ENST00000449058		K7ENP7	123 aa		13.57	□□□□□ -0.24
TOM1-210	ENST00000449058	PEX7	O00628	323 aa		13.57	□□□□□ -0.24
TOM1-210	ENST00000449058	RPL27A	P46776	148 aa	Known RBP	13.57	□□□□□ -0.24
TOM1-210	ENST00000449058	CASP6	P55212	293 aa		13.57	□□□□□ -0.24
TOM1-210	ENST00000449058	ZNF841	Q6ZN19	808 aa		13.57	□□□□□ -0.24
TOM1-210	ENST00000449058	LINC00305	Q7Z4B0	112 aa		13.57	□□□□□ -0.24
TOM1-210	ENST00000449058	TRGV9	Q99603	122 aa		13.57	□□□□□ -0.24
TOM1-210	ENST00000449058	TNFRSF19	Q9NS68	423 aa		13.57	□□□□□ -0.24
TOM1-210	ENST00000449058		F2Z2F3	143 aa		13.57	□□□□□ -0.24
TOM1-210	ENST00000449058	PRRX1	P54821	245 aa		13.57	□□□□□ -0.24
TOM1-210	ENST00000449058	TCL1A	P56279	114 aa		13.57	□□□□□ -0.24
TOM1-210	ENST00000449058	HCP5	Q6MZN7	132 aa		13.57	□□□□□ -0.24
TOM1-210	ENST00000449058	FAM231D	Q6ZW35	169 aa		13.57	□□□□□ -0.24
TOM1-210	ENST00000449058		Q6ZWC4	215 aa		13.57	□□□□□ -0.24
TOM1-210	ENST00000449058	MISP3	Q96FF7	219 aa		13.57	□□□□□ -0.24
TOM1-210	ENST00000449058	NAT8B	Q9UHF3	227 aa		13.57	□□□□□ -0.24
TOM1-210	ENST00000449058	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	13.57	□□□□□ -0.24
TOM1-210	ENST00000449058	SPINK4	O60575	86 aa		13.56	□□□□□ -0.24
TOM1-210	ENST00000449058	PLAU	P00749	431 aa		13.56	□□□□□ -0.24
TOM1-210	ENST00000449058	AMY1A	P04745	511 aa		13.56	□□□□□ -0.24
TOM1-210	ENST00000449058	CNTFR	P26992	372 aa		13.56	□□□□□ -0.24
TOM1-210	ENST00000449058	PAX2	Q02962	417 aa		13.56	□□□□□ -0.24
TOM1-210	ENST00000449058	BAGE3	Q86Y29	109 aa		13.56	□□□□□ -0.24
TOM1-210	ENST00000449058	BAGE2	Q86Y30	109 aa		13.56	□□□□□ -0.24
TOM1-210	ENST00000449058	NHLRC2	Q8NBF2	726 aa		13.56	□□□□□ -0.24
TOM1-210	ENST00000449058	TMEM116	Q8NCL8	245 aa		13.56	□□□□□ -0.24
TOM1-210	ENST00000449058	MBD6	Q96DN6	1003 aa		13.56	□□□□□ -0.24
TOM1-210	ENST00000449058	PERP	Q96FX8	193 aa		13.56	□□□□□ -0.24
TOM1-210	ENST00000449058	SIGLEC9	Q9Y336	463 aa		13.56	□□□□□ -0.24
TOM1-210	ENST00000449058	MOS	P00540	346 aa		13.56	□□□□□ -0.24
TOM1-210	ENST00000449058	COMP	P49747	757 aa	Predicted RBP	13.56	□□□□□ -0.24
TOM1-210	ENST00000449058	DLX1	P56177	255 aa		13.56	□□□□□ -0.24
TOM1-210	ENST00000449058	TNXA	Q16473	311 aa		13.56	□□□□□ -0.24
TOM1-210	ENST00000449058	C1orf194	Q5T5A4	169 aa		13.56	□□□□□ -0.24
TOM1-210	ENST00000449058	STXBP6	Q8NFX7	210 aa		13.56	□□□□□ -0.24
TOM1-210	ENST00000449058	GNB4	Q9HAV0	340 aa		13.56	□□□□□ -0.24
TOM1-210	ENST00000449058	SERTAD4	Q9NUC0	356 aa		13.56	□□□□□ -0.24
TOM1-210	ENST00000449058	ADGRG4	Q8IZF6	3080 aa		13.55	□□□□□ -0.24
TOM1-210	ENST00000449058	IGHV1-3	A0A0C4DH29	117 aa		13.55	□□□□□ -0.24
TOM1-210	ENST00000449058	IZUMO1R	A6ND01	250 aa		13.55	□□□□□ -0.24
TOM1-210	ENST00000449058	BUB1B-PAK6	H3BSN5	160 aa		13.55	□□□□□ -0.24
TOM1-210	ENST00000449058	SLC35B1	P78383	322 aa		13.55	□□□□□ -0.24
TOM1-210	ENST00000449058	LBH	Q53QV2	105 aa	Predicted RBP	13.55	□□□□□ -0.24
TOM1-210	ENST00000449058	CLEC7A	Q9BXN2	247 aa		13.55	□□□□□ -0.24
TOM1-210	ENST00000449058	POLE	Q07864	2286 aa		13.55	□□□□□ -0.24
TOM1-210	ENST00000449058	MALRD1	Q5VYJ5	2156 aa		13.54	□□□□□ -0.24
TOM1-210	ENST00000449058	KIR2DL5B	A0A0G2JN68	375 aa		13.54	□□□□□ -0.24
TOM1-210	ENST00000449058	KIR2DL5B	A0A0G2JPC4	375 aa		13.54	□□□□□ -0.24
TOM1-210	ENST00000449058	LYNX1	G3V0Z9	82 aa		13.54	□□□□□ -0.24
TOM1-210	ENST00000449058	LYNX1	P0DP58	116 aa		13.54	□□□□□ -0.24
TOM1-210	ENST00000449058	KIR2DL5A	Q8N109	375 aa		13.54	□□□□□ -0.24
TOM1-210	ENST00000449058	FAM168A	Q92567	244 aa		13.54	□□□□□ -0.24
TOM1-210	ENST00000449058	INSIG2	Q9Y5U4	225 aa		13.54	□□□□□ -0.24
TOM1-210	ENST00000449058	DMXL2	Q8TDJ6	3036 aa		13.54	□□□□□ -0.24
TOM1-210	ENST00000449058	HLA-DQA1	P01909	254 aa		13.54	□□□□□ -0.24
TOM1-210	ENST00000449058	RBP4	P02753	201 aa		13.54	□□□□□ -0.24
TOM1-210	ENST00000449058	ORM2	P19652	201 aa		13.54	□□□□□ -0.24
TOM1-210	ENST00000449058	FOXC1	Q12948	553 aa		13.54	□□□□□ -0.24
TOM1-210	ENST00000449058	OR10J3	Q5JRS4	329 aa		13.54	□□□□□ -0.24
TOM1-210	ENST00000449058	C19orf35	Q6ZS72	473 aa		13.54	□□□□□ -0.24
TOM1-210	ENST00000449058	C2orf88	Q9BSF0	95 aa		13.54	□□□□□ -0.24
TOM1-210	ENST00000449058	TRAV34	A0A0B4J273	112 aa		13.53	□□□□□ -0.24
TOM1-210	ENST00000449058	CORT	O00230	105 aa		13.53	□□□□□ -0.24
TOM1-210	ENST00000449058	CA1	P00915	261 aa	Predicted RBP	13.53	□□□□□ -0.24
TOM1-210	ENST00000449058	SFTPC	P11686	197 aa		13.53	□□□□□ -0.24
TOM1-210	ENST00000449058	TMEM183B	Q1AE95	376 aa		13.53	□□□□□ -0.24
TOM1-210	ENST00000449058	MRPL54	Q6P161	138 aa	Known RBP	13.53	□□□□□ -0.24
TOM1-210	ENST00000449058	OR1B1	Q8NGR6	318 aa		13.53	□□□□□ -0.24
TOM1-210	ENST00000449058	C22orf15	Q8WYQ4	148 aa		13.53	□□□□□ -0.24
TOM1-210	ENST00000449058	C7orf69	Q9H7B7	122 aa		13.53	□□□□□ -0.24
TOM1-210	ENST00000449058	TEX22	C9J3V5	150 aa		13.53	□□□□□ -0.24
TOM1-210	ENST00000449058	PPP1R27	Q86WC6	154 aa		13.53	□□□□□ -0.24
TOM1-210	ENST00000449058	WIPF2	Q8TF74	440 aa	Predicted RBP	13.53	□□□□□ -0.24
TOM1-210	ENST00000449058	TBX15	Q96SF7	602 aa		13.53	□□□□□ -0.24
TOM1-210	ENST00000449058	HSPB9	Q9BQS6	159 aa		13.53	□□□□□ -0.24
TOM1-210	ENST00000449058	EPDR1	Q9UM22	224 aa		13.53	□□□□□ -0.24
TOM1-210	ENST00000449058		A0A1B0GV90	55 aa		13.52	□□□□□ -0.24
TOM1-210	ENST00000449058	BMPR1B	O00238	502 aa		13.52	□□□□□ -0.24
TOM1-210	ENST00000449058	SNRPC	P09234	159 aa	Known RBP	13.52	□□□□□ -0.24
TOM1-210	ENST00000449058	CD33	P20138	364 aa		13.52	□□□□□ -0.24
TOM1-210	ENST00000449058	PLP1	P60201	277 aa		13.52	□□□□□ -0.24
TOM1-210	ENST00000449058	PRB3	Q04118	309 aa	Predicted RBP	13.52	□□□□□ -0.24
TOM1-210	ENST00000449058	TPTE2P1	Q5T6R2	138 aa		13.52	□□□□□ -0.24
TOM1-210	ENST00000449058	PPP1R14D	Q9NXH3	145 aa		13.52	□□□□□ -0.24
TOM1-210	ENST00000449058	KLF12	Q9Y4X4	402 aa		13.52	□□□□□ -0.24
TOM1-210	ENST00000449058	F11R	Q9Y624	299 aa	Known RBP	13.52	□□□□□ -0.24
TOM1-210	ENST00000449058	HYPM	O75409	117 aa		13.52	□□□□□ -0.25
TOM1-210	ENST00000449058	FAM87A	P0C7U9	286 aa		13.52	□□□□□ -0.25
TOM1-210	ENST00000449058	GNG5	P63218	68 aa		13.52	□□□□□ -0.25

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