RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 CGB7P0DN87 165 aa3.32□□□□□ -1.88
SDCBP-205ENST00000447267 MIFP14174 115 aa3.32□□□□□ -1.88
SDCBP-205ENST00000447267 SLC2A5P22732 501 aa3.32□□□□□ -1.88
SDCBP-205ENST00000447267 MPZP25189 248 aa3.32□□□□□ -1.88
SDCBP-205ENST00000447267 NPBWR1P48145 328 aa3.32□□□□□ -1.88
SDCBP-205ENST00000447267 CX3CL1P78423 397 aa3.32□□□□□ -1.88
SDCBP-205ENST00000447267 ODF4Q2M2E3 257 aa3.32□□□□□ -1.88
SDCBP-205ENST00000447267 IFI44LQ53G44 452 aa3.32□□□□□ -1.88
SDCBP-205ENST00000447267 TMEM69Q5SWH9 247 aa3.32□□□□□ -1.88
SDCBP-205ENST00000447267 COL5A1-AS1Q5SY13 56 aa3.32□□□□□ -1.88
SDCBP-205ENST00000447267 ZNF343Q6P1L6 599 aa3.32□□□□□ -1.88
SDCBP-205ENST00000447267 HACD2Q6Y1H2 254 aa3.32□□□□□ -1.88
SDCBP-205ENST00000447267 RBPMS2Q6ZRY4 209 aaKnown RBP3.32□□□□□ -1.88
SDCBP-205ENST00000447267 SCXQ7RTU7 201 aa3.32□□□□□ -1.88
SDCBP-205ENST00000447267 MSRB3Q8IXL7 192 aa3.32□□□□□ -1.88
SDCBP-205ENST00000447267 JAGN1Q8N5M9 183 aa3.32□□□□□ -1.88
SDCBP-205ENST00000447267 DUSP18Q8NEJ0 188 aa3.32□□□□□ -1.88
SDCBP-205ENST00000447267 LFNGQ8NES3 379 aa3.32□□□□□ -1.88
SDCBP-205ENST00000447267 OR13C8Q8NGS7 320 aa3.32□□□□□ -1.88
SDCBP-205ENST00000447267 OR10A6Q8NH74 314 aa3.32□□□□□ -1.88
SDCBP-205ENST00000447267 HAVCR2Q8TDQ0 301 aa3.32□□□□□ -1.88
SDCBP-205ENST00000447267 RTN4IP1Q8WWV3 396 aaPredicted RBP3.32□□□□□ -1.88
SDCBP-205ENST00000447267 ASB9Q96DX5 294 aa3.32□□□□□ -1.88
SDCBP-205ENST00000447267 SFRP2Q96HF1 295 aa3.32□□□□□ -1.88
SDCBP-205ENST00000447267 GINS4Q9BRT9 223 aa3.32□□□□□ -1.88
SDCBP-205ENST00000447267 Q9H3A6 140 aa3.32□□□□□ -1.88
SDCBP-205ENST00000447267 CST9LQ9H4G1 147 aa3.32□□□□□ -1.88
SDCBP-205ENST00000447267 OR2S2Q9NQN1 319 aa3.32□□□□□ -1.88
SDCBP-205ENST00000447267 PLEKHJ1Q9NW61 149 aa3.32□□□□□ -1.88
SDCBP-205ENST00000447267 SLC25A37Q9NYZ2 338 aa3.32□□□□□ -1.88
SDCBP-205ENST00000447267 HSPB7Q9UBY9 170 aa3.32□□□□□ -1.88
SDCBP-205ENST00000447267 V9GYH0 126 aa3.32□□□□□ -1.88
SDCBP-205ENST00000447267 MEIKINA0A087WXM9 373 aa3.31□□□□□ -1.88
SDCBP-205ENST00000447267 SMCO3A2RU48 225 aa3.31□□□□□ -1.88
SDCBP-205ENST00000447267 C7orf66A4D0T2 115 aa3.31□□□□□ -1.88
SDCBP-205ENST00000447267 NPIPB11E5RHQ5 1161 aa3.31□□□□□ -1.88
SDCBP-205ENST00000447267 INMT-MINDY4F8WBC2 141 aa3.31□□□□□ -1.88
SDCBP-205ENST00000447267 M0R036 132 aa3.31□□□□□ -1.88
SDCBP-205ENST00000447267 HAND1O96004 215 aa3.31□□□□□ -1.88
SDCBP-205ENST00000447267 MT-CO2P00403 227 aa3.31□□□□□ -1.88
SDCBP-205ENST00000447267 ADCYAP1P18509 176 aa3.31□□□□□ -1.88
SDCBP-205ENST00000447267 RAB5AP20339 215 aa3.31□□□□□ -1.88
SDCBP-205ENST00000447267 PSMB9P28065 219 aa3.31□□□□□ -1.88
SDCBP-205ENST00000447267 NUDT2P50583 147 aa3.31□□□□□ -1.88
SDCBP-205ENST00000447267 EMP1P54849 157 aa3.31□□□□□ -1.88
SDCBP-205ENST00000447267 CCL18P55774 89 aa3.31□□□□□ -1.88
SDCBP-205ENST00000447267 ZNF121P58317 390 aaPredicted RBP3.31□□□□□ -1.88
SDCBP-205ENST00000447267 FXYD6P3P58550 94 aa3.31□□□□□ -1.88
SDCBP-205ENST00000447267 CKS1BP61024 79 aa3.31□□□□□ -1.88
SDCBP-205ENST00000447267 RPL37AP61513 92 aaKnown RBP3.31□□□□□ -1.88
SDCBP-205ENST00000447267 RANP62826 216 aaKnown RBP3.31□□□□□ -1.88
SDCBP-205ENST00000447267 JOSD1Q15040 202 aaPredicted RBP3.31□□□□□ -1.88
SDCBP-205ENST00000447267 KHDC3LQ587J8 217 aa3.31□□□□□ -1.88
SDCBP-205ENST00000447267 TTC32Q5I0X7 151 aa3.31□□□□□ -1.88
SDCBP-205ENST00000447267 SPIN3Q5JUX0 258 aa3.31□□□□□ -1.88
SDCBP-205ENST00000447267 C6orf141Q5SZD1 244 aa3.31□□□□□ -1.88
SDCBP-205ENST00000447267 IDNKQ5T6J7 187 aa3.31□□□□□ -1.88
SDCBP-205ENST00000447267 GLYATQ6IB77 296 aa3.31□□□□□ -1.88
SDCBP-205ENST00000447267 FAAP20Q6NZ36 180 aa3.31□□□□□ -1.88
SDCBP-205ENST00000447267 STEAP1BQ6NZ63 245 aa3.31□□□□□ -1.88
SDCBP-205ENST00000447267 DNM1P34Q6PK57 102 aa3.31□□□□□ -1.88
SDCBP-205ENST00000447267 TMED4Q7Z7H5 227 aa3.31□□□□□ -1.88
SDCBP-205ENST00000447267 SMIM29Q86T20 159 aa3.31□□□□□ -1.88
SDCBP-205ENST00000447267 OAFQ86UD1 273 aa3.31□□□□□ -1.88
SDCBP-205ENST00000447267 HIST3H2BBQ8N257 126 aa3.31□□□□□ -1.88
SDCBP-205ENST00000447267 MTURNQ8N3F0 131 aa3.31□□□□□ -1.88
SDCBP-205ENST00000447267 OR4C5Q8NGB2 326 aa3.31□□□□□ -1.88
SDCBP-205ENST00000447267 OR11H7Q8NGC8 314 aa3.31□□□□□ -1.88
SDCBP-205ENST00000447267 OR5A2Q8NGI9 324 aa3.31□□□□□ -1.88
SDCBP-205ENST00000447267 OR4D5Q8NGN0 318 aa3.31□□□□□ -1.88
SDCBP-205ENST00000447267 OR10R2Q8NGX6 335 aa3.31□□□□□ -1.88
SDCBP-205ENST00000447267 OR10X1Q8NGY0 326 aa3.31□□□□□ -1.88
SDCBP-205ENST00000447267 EMG1Q92979 244 aaKnown RBP3.31□□□□□ -1.88
SDCBP-205ENST00000447267 ORAI1Q96D31 301 aa3.31□□□□□ -1.88
SDCBP-205ENST00000447267 SLAMF6Q96DU3 332 aa3.31□□□□□ -1.88
SDCBP-205ENST00000447267 COQ2Q96H96 371 aa3.31□□□□□ -1.88
SDCBP-205ENST00000447267 UHRF2Q96PU4 802 aa3.31□□□□□ -1.88
SDCBP-205ENST00000447267 TP53RKQ96S44 253 aa3.31□□□□□ -1.88
SDCBP-205ENST00000447267 GPX7Q96SL4 187 aaPredicted RBP3.31□□□□□ -1.88
SDCBP-205ENST00000447267 MARVELD1Q9BSK0 173 aa3.31□□□□□ -1.88
SDCBP-205ENST00000447267 CST11Q9H112 138 aa3.31□□□□□ -1.88
SDCBP-205ENST00000447267 AIG1Q9NVV5 245 aa3.31□□□□□ -1.88
SDCBP-205ENST00000447267 RBFOX1Q9NWB1 397 aaKnown RBP3.31□□□□□ -1.88
SDCBP-205ENST00000447267 RAB22AQ9UL26 194 aa3.31□□□□□ -1.88
SDCBP-205ENST00000447267 POLDIP2Q9Y2S7 368 aa3.31□□□□□ -1.88
SDCBP-205ENST00000447267 EXOSC1Q9Y3B2 195 aaKnown RBP3.31□□□□□ -1.88
SDCBP-205ENST00000447267 SYNE2Q8WXH0 6885 aaKnown RBP3.3□□□□□ -1.88
SDCBP-205ENST00000447267 TGIF2-C20orf24A0A0A6YYL0 155 aa3.3□□□□□ -1.88
SDCBP-205ENST00000447267 TRAV39A0A0B4J263 110 aa3.3□□□□□ -1.88
SDCBP-205ENST00000447267 KBTBD11-OT1A0A1B0GTJ5 212 aa3.3□□□□□ -1.88
SDCBP-205ENST00000447267 FAM240BA0A1B0GVZ2 78 aa3.3□□□□□ -1.88
SDCBP-205ENST00000447267 TMEM269A0A1B0GVZ9 245 aa3.3□□□□□ -1.88
SDCBP-205ENST00000447267 ODAMA1E959 279 aa3.3□□□□□ -1.88
SDCBP-205ENST00000447267 ZNF705EA8MWA4 302 aaPredicted RBP3.3□□□□□ -1.88
SDCBP-205ENST00000447267 ZNF878C9JN71 531 aa3.3□□□□□ -1.88
SDCBP-205ENST00000447267 PPP1R2P9O14990 202 aa3.3□□□□□ -1.88
SDCBP-205ENST00000447267 PLA2G10O15496 165 aa3.3□□□□□ -1.88
SDCBP-205ENST00000447267 GNG7O60262 68 aa3.3□□□□□ -1.88
SDCBP-205ENST00000447267 OR2C1O95371 312 aa3.3□□□□□ -1.88
SDCBP-205ENST00000447267 HPRT1P00492 218 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms