RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 AJUBAQ96IF1 538 aa12.42□□□□□ -0.42
SNX13-204ENST00000444712 FAM167A-AS1Q96KT0 104 aa12.42□□□□□ -0.42
SNX13-204ENST00000444712 TRAV30A0A087WSZ9 112 aa12.42□□□□□ -0.42
SNX13-204ENST00000444712 SCO2A0A1W2PP80 73 aa12.42□□□□□ -0.42
SNX13-204ENST00000444712 TGOLN2O43493 480 aa12.42□□□□□ -0.42
SNX13-204ENST00000444712 HYPMO75409 117 aa12.42□□□□□ -0.42
SNX13-204ENST00000444712 IGLC1P0CG04 106 aa12.42□□□□□ -0.42
SNX13-204ENST00000444712 SLC25A16P16260 332 aa12.42□□□□□ -0.42
SNX13-204ENST00000444712 PATE2Q6UY27 113 aa12.42□□□□□ -0.42
SNX13-204ENST00000444712 C19orf35Q6ZS72 473 aa12.42□□□□□ -0.42
SNX13-204ENST00000444712 LINC00305Q7Z4B0 112 aa12.42□□□□□ -0.42
SNX13-204ENST00000444712 Q8N9W7 124 aa12.42□□□□□ -0.42
SNX13-204ENST00000444712 RBM14Q96PK6 669 aaKnown RBP12.42□□□□□ -0.42
SNX13-204ENST00000444712 PAXXQ9BUH6 204 aa12.42□□□□□ -0.42
SNX13-204ENST00000444712 OR51M1Q9H341 326 aa12.42□□□□□ -0.42
SNX13-204ENST00000444712 USP24Q9UPU5 2620 aa12.42□□□□□ -0.42
SNX13-204ENST00000444712 LY96Q9Y6Y9 160 aa12.42□□□□□ -0.42
SNX13-204ENST00000444712 DCHS2Q6V1P9 2916 aa12.41□□□□□ -0.42
SNX13-204ENST00000444712 IGHV1-69DA0A0B4J2H0 117 aa12.41□□□□□ -0.42
SNX13-204ENST00000444712 K7EIM0 57 aa12.41□□□□□ -0.42
SNX13-204ENST00000444712 PPP1R2P9O14990 202 aa12.41□□□□□ -0.42
SNX13-204ENST00000444712 SCGB2A1O75556 95 aa12.41□□□□□ -0.42
SNX13-204ENST00000444712 IGHV1-69P01742 117 aa12.41□□□□□ -0.42
SNX13-204ENST00000444712 C1QL4Q86Z23 238 aa12.41□□□□□ -0.42
SNX13-204ENST00000444712 OR1B1Q8NGR6 318 aa12.41□□□□□ -0.42
SNX13-204ENST00000444712 ZNF48Q96MX3 618 aaPredicted RBP12.41□□□□□ -0.42
SNX13-204ENST00000444712 OR5B12Q96R08 314 aa12.41□□□□□ -0.42
SNX13-204ENST00000444712 TCEAL7Q9BRU2 100 aa12.41□□□□□ -0.42
SNX13-204ENST00000444712 WNK2Q9Y3S1 2297 aa12.41□□□□□ -0.42
SNX13-204ENST00000444712 IGHV4-30-2A0A087WSY4 118 aa12.4□□□□□ -0.42
SNX13-204ENST00000444712 C9JCJ5 164 aa12.4□□□□□ -0.42
SNX13-204ENST00000444712 H7BYZ3 331 aa12.4□□□□□ -0.42
SNX13-204ENST00000444712 ORM2P19652 201 aa12.4□□□□□ -0.42
SNX13-204ENST00000444712 S100PP25815 95 aa12.4□□□□□ -0.42
SNX13-204ENST00000444712 S100A7AQ86SG5 101 aa12.4□□□□□ -0.42
SNX13-204ENST00000444712 LINC01551Q86U37 167 aa12.4□□□□□ -0.42
SNX13-204ENST00000444712 FAM103A1Q9BTL3 118 aaKnown RBP12.4□□□□□ -0.42
SNX13-204ENST00000444712 IGLV11-55A0A075B6I3 123 aa12.4□□□□□ -0.42
SNX13-204ENST00000444712 IGHV3-21A0A0B4J1V1 117 aa12.4□□□□□ -0.42
SNX13-204ENST00000444712 MSMBP08118 114 aa12.4□□□□□ -0.42
SNX13-204ENST00000444712 HIST1H1BP16401 226 aaKnown RBP12.4□□□□□ -0.42
SNX13-204ENST00000444712 FBLN7Q53RD9 439 aa12.4□□□□□ -0.42
SNX13-204ENST00000444712 C16orf82Q7Z2V1 217 aa12.4□□□□□ -0.42
SNX13-204ENST00000444712 Q8WTZ3 238 aa12.4□□□□□ -0.42
SNX13-204ENST00000444712 TMEM68Q96MH6 324 aa12.4□□□□□ -0.42
SNX13-204ENST00000444712 BIN3Q9NQY0 253 aa12.4□□□□□ -0.42
SNX13-204ENST00000444712 IGHV7-81A0A0B4J1V7 117 aa12.39□□□□□ -0.43
SNX13-204ENST00000444712 OR10J4P0C629 311 aa12.39□□□□□ -0.43
SNX13-204ENST00000444712 GATA3P23771 443 aa12.39□□□□□ -0.43
SNX13-204ENST00000444712 PIP4P2Q8N4L2 257 aa12.39□□□□□ -0.43
SNX13-204ENST00000444712 HIGD1AQ9Y241 93 aa12.39□□□□□ -0.43
SNX13-204ENST00000444712 B4DSR2 109 aa12.38□□□□□ -0.43
SNX13-204ENST00000444712 MFAP4P55083 255 aa12.38□□□□□ -0.43
SNX13-204ENST00000444712 FAM120AOSQ5T036 256 aa12.38□□□□□ -0.43
SNX13-204ENST00000444712 ASPHD1Q5U4P2 390 aa12.38□□□□□ -0.43
SNX13-204ENST00000444712 DERL1Q9BUN8 251 aa12.38□□□□□ -0.43
SNX13-204ENST00000444712 URGCP-MRPS24S4R325 110 aa12.38□□□□□ -0.43
SNX13-204ENST00000444712 TRBV24-1A0A075B6N3 115 aa12.38□□□□□ -0.43
SNX13-204ENST00000444712 TRAV5A0A0B4J249 113 aa12.38□□□□□ -0.43
SNX13-204ENST00000444712 MDFIC2A0A1B0GVS7 189 aa12.38□□□□□ -0.43
SNX13-204ENST00000444712 PSG1P11464 419 aa12.38□□□□□ -0.43
SNX13-204ENST00000444712 NDPQ00604 133 aa12.38□□□□□ -0.43
SNX13-204ENST00000444712 MORN5Q5VZ52 161 aa12.38□□□□□ -0.43
SNX13-204ENST00000444712 RUSC1-AS1Q66K80 236 aa12.38□□□□□ -0.43
SNX13-204ENST00000444712 ZNF343Q6P1L6 599 aa12.38□□□□□ -0.43
SNX13-204ENST00000444712 SGMS2Q8NHU3 365 aa12.38□□□□□ -0.43
SNX13-204ENST00000444712 TMEM190Q8WZ59 177 aa12.38□□□□□ -0.43
SNX13-204ENST00000444712 BTF3L4Q96K17 158 aa12.38□□□□□ -0.43
SNX13-204ENST00000444712 CFAP46Q8IYW2 2715 aa12.37□□□□□ -0.43
SNX13-204ENST00000444712 TOMM40O96008 361 aa12.37□□□□□ -0.43
SNX13-204ENST00000444712 RD3LP0DJH9 198 aa12.37□□□□□ -0.43
SNX13-204ENST00000444712 RPS10P46783 165 aaKnown RBP12.37□□□□□ -0.43
SNX13-204ENST00000444712 TIGITQ495A1 244 aa12.37□□□□□ -0.43
SNX13-204ENST00000444712 FANCD2OSQ96PS1 177 aa12.37□□□□□ -0.43
SNX13-204ENST00000444712 MEGF9Q9H1U4 602 aa12.37□□□□□ -0.43
SNX13-204ENST00000444712 TRAV20A0A0B4J274 112 aa12.37□□□□□ -0.43
SNX13-204ENST00000444712 TRAV40A0A0B4J280 105 aa12.37□□□□□ -0.43
SNX13-204ENST00000444712 HELTA6NFD8 242 aa12.37□□□□□ -0.43
SNX13-204ENST00000444712 GNG7O60262 68 aa12.37□□□□□ -0.43
SNX13-204ENST00000444712 SRP14P37108 136 aaKnown RBP12.37□□□□□ -0.43
SNX13-204ENST00000444712 GALR1P47211 349 aa12.37□□□□□ -0.43
SNX13-204ENST00000444712 YPEL3P61236 119 aaPredicted RBP12.37□□□□□ -0.43
SNX13-204ENST00000444712 LYZP61626 148 aa12.37□□□□□ -0.43
SNX13-204ENST00000444712 SUMO1P63165 101 aaKnown RBP12.37□□□□□ -0.43
SNX13-204ENST00000444712 SRSF1Q07955 248 aaKnown RBP eCLIP12.37□□□□□ -0.43
SNX13-204ENST00000444712 CLEC12BQ2HXU8 276 aa12.37□□□□□ -0.43
SNX13-204ENST00000444712 KCNIP4Q6PIL6 250 aa12.37□□□□□ -0.43
SNX13-204ENST00000444712 FAM110DQ8TAY7 271 aaPredicted RBP12.37□□□□□ -0.43
SNX13-204ENST00000444712 SSX3Q99909 188 aa12.37□□□□□ -0.43
SNX13-204ENST00000444712 GGTLC3B5MD39 225 aa12.36□□□□□ -0.43
SNX13-204ENST00000444712 IGKV1-17P01599 117 aa12.36□□□□□ -0.43
SNX13-204ENST00000444712 RPL35P42766 123 aaKnown RBP12.36□□□□□ -0.43
SNX13-204ENST00000444712 FXYD5Q96DB9 178 aa12.36□□□□□ -0.43
SNX13-204ENST00000444712 FAM210BQ96KR6 192 aa12.36□□□□□ -0.43
SNX13-204ENST00000444712 IMMP2LQ96T52 175 aa12.36□□□□□ -0.43
SNX13-204ENST00000444712 TXN2Q99757 166 aa12.36□□□□□ -0.43
SNX13-204ENST00000444712 MOB4Q9Y3A3 225 aa12.36□□□□□ -0.43
SNX13-204ENST00000444712 S100A6P06703 90 aa12.35□□□□□ -0.43
SNX13-204ENST00000444712 CXCL1P09341 107 aa12.35□□□□□ -0.43
SNX13-204ENST00000444712 PYYP10082 97 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms