RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 GUCA1AP43080 201 aaPredicted RBP2.91□□□□□ -1.94
CDC42BPA-207ENST00000441725 ZNF138P52744 262 aa2.91□□□□□ -1.94
CDC42BPA-207ENST00000441725 TAS2R46P59540 309 aa2.91□□□□□ -1.94
CDC42BPA-207ENST00000441725 TIMM10P62072 90 aa2.91□□□□□ -1.94
CDC42BPA-207ENST00000441725 EIF5AP63241 154 aaKnown RBP2.91□□□□□ -1.94
CDC42BPA-207ENST00000441725 PRR3P79522 188 aaKnown RBP2.91□□□□□ -1.94
CDC42BPA-207ENST00000441725 FABP5Q01469 135 aa2.91□□□□□ -1.94
CDC42BPA-207ENST00000441725 AKR1C1Q04828 323 aa2.91□□□□□ -1.94
CDC42BPA-207ENST00000441725 SPANXN3Q5MJ09 141 aa2.91□□□□□ -1.94
CDC42BPA-207ENST00000441725 FAM222AQ5U5X8 452 aa2.91□□□□□ -1.94
CDC42BPA-207ENST00000441725 EIF5AL1Q6IS14 154 aaKnown RBP2.91□□□□□ -1.94
CDC42BPA-207ENST00000441725 ZNF773Q6PK81 442 aa2.91□□□□□ -1.94
CDC42BPA-207ENST00000441725 SBSNQ6UWP8 590 aa2.91□□□□□ -1.94
CDC42BPA-207ENST00000441725 ACP7Q6ZNF0 438 aa2.91□□□□□ -1.94
CDC42BPA-207ENST00000441725 SLC22A24Q8N4F4 322 aa2.91□□□□□ -1.94
CDC42BPA-207ENST00000441725 C3orf22Q8N5N4 141 aa2.91□□□□□ -1.94
CDC42BPA-207ENST00000441725 SPIN2AQ99865 258 aa2.91□□□□□ -1.94
CDC42BPA-207ENST00000441725 HIST1H2BLQ99880 126 aa2.91□□□□□ -1.94
CDC42BPA-207ENST00000441725 SPIN2BQ9BPZ2 258 aa2.91□□□□□ -1.94
CDC42BPA-207ENST00000441725 SLC25A21Q9BQT8 299 aaPredicted RBP2.91□□□□□ -1.94
CDC42BPA-207ENST00000441725 NPVFQ9HCQ7 196 aa2.91□□□□□ -1.94
CDC42BPA-207ENST00000441725 ANAPC10Q9UM13 185 aa2.91□□□□□ -1.94
CDC42BPA-207ENST00000441725 SIGLEC7Q9Y286 467 aa2.91□□□□□ -1.94
CDC42BPA-207ENST00000441725 MYH6P13533 1939 aa2.91□□□□□ -1.94
CDC42BPA-207ENST00000441725 CHD8Q9HCK8 2581 aa2.91□□□□□ -1.94
CDC42BPA-207ENST00000441725 KIF1AQ12756 1690 aa2.91□□□□□ -1.94
CDC42BPA-207ENST00000441725 MICAL3Q7RTP6 2002 aa2.91□□□□□ -1.94
CDC42BPA-207ENST00000441725 IGHV1-69-2A0A0G2JMI3 117 aa2.91□□□□□ -1.94
CDC42BPA-207ENST00000441725 ODAMA1E959 279 aa2.91□□□□□ -1.94
CDC42BPA-207ENST00000441725 EPOPA6NHQ4 379 aa2.91□□□□□ -1.94
CDC42BPA-207ENST00000441725 OR4C45A6NMZ5 311 aa2.91□□□□□ -1.94
CDC42BPA-207ENST00000441725 F5H5P2 479 aa2.91□□□□□ -1.94
CDC42BPA-207ENST00000441725 H3BQ15 152 aa2.91□□□□□ -1.94
CDC42BPA-207ENST00000441725 PEX7O00628 323 aa2.91□□□□□ -1.94
CDC42BPA-207ENST00000441725 CFDP00746 253 aaPredicted RBP2.91□□□□□ -1.94
CDC42BPA-207ENST00000441725 SHBGP04278 402 aa2.91□□□□□ -1.94
CDC42BPA-207ENST00000441725 GATA2P23769 480 aaPredicted RBP2.91□□□□□ -1.94
CDC42BPA-207ENST00000441725 P2RX1P51575 399 aa2.91□□□□□ -1.94
CDC42BPA-207ENST00000441725 FOXA3P55318 350 aaPredicted RBP2.91□□□□□ -1.94
CDC42BPA-207ENST00000441725 GFERP55789 205 aa2.91□□□□□ -1.94
CDC42BPA-207ENST00000441725 DAD1P61803 113 aa2.91□□□□□ -1.94
CDC42BPA-207ENST00000441725 FKBP1AP62942 108 aaKnown RBP2.91□□□□□ -1.94
CDC42BPA-207ENST00000441725 ELOCQ15369 112 aa2.91□□□□□ -1.94
CDC42BPA-207ENST00000441725 C9orf129Q5T035 196 aaKnown RBP2.91□□□□□ -1.94
CDC42BPA-207ENST00000441725 DNAJC24Q6P3W2 148 aa2.91□□□□□ -1.94
CDC42BPA-207ENST00000441725 SCGB1D4Q6XE38 83 aa2.91□□□□□ -1.94
CDC42BPA-207ENST00000441725 SMIM5Q71RC9 77 aa2.91□□□□□ -1.94
CDC42BPA-207ENST00000441725 TEX29Q8N6K0 151 aa2.91□□□□□ -1.94
CDC42BPA-207ENST00000441725 CD177Q8N6Q3 437 aa2.91□□□□□ -1.94
CDC42BPA-207ENST00000441725 C14orf178Q8N769 122 aaPredicted RBP2.91□□□□□ -1.94
CDC42BPA-207ENST00000441725 ZNF431Q8TF32 576 aaPredicted RBP2.91□□□□□ -1.94
CDC42BPA-207ENST00000441725 BORCS8Q96FH0 119 aa2.91□□□□□ -1.94
CDC42BPA-207ENST00000441725 VAMP8Q9BV40 100 aa2.91□□□□□ -1.94
CDC42BPA-207ENST00000441725 MRPL32Q9BYC8 188 aaKnown RBP2.91□□□□□ -1.94
CDC42BPA-207ENST00000441725 DPY30Q9C005 99 aa2.91□□□□□ -1.94
CDC42BPA-207ENST00000441725 MED28Q9H204 178 aa2.91□□□□□ -1.94
CDC42BPA-207ENST00000441725 COQ4Q9Y3A0 265 aa2.91□□□□□ -1.94
CDC42BPA-207ENST00000441725 ARAP2Q8WZ64 1704 aa2.91□□□□□ -1.94
CDC42BPA-207ENST00000441725 EYSQ5T1H1 3165 aa2.91□□□□□ -1.94
CDC42BPA-207ENST00000441725 NUP210LQ5VU65 1888 aa2.91□□□□□ -1.94
CDC42BPA-207ENST00000441725 COL18A1P39060 1754 aa2.91□□□□□ -1.94
CDC42BPA-207ENST00000441725 GTF3C1Q12789 2109 aa2.91□□□□□ -1.94
CDC42BPA-207ENST00000441725 ALPK3Q96L96 1907 aa2.9□□□□□ -1.94
CDC42BPA-207ENST00000441725 ZNF638Q14966 1978 aaKnown RBP2.9□□□□□ -1.94
CDC42BPA-207ENST00000441725 M0R129 80 aa2.9□□□□□ -1.94
CDC42BPA-207ENST00000441725 SS18L1O75177 396 aaPredicted RBP2.9□□□□□ -1.94
CDC42BPA-207ENST00000441725 KLF7O75840 302 aaPredicted RBP2.9□□□□□ -1.94
CDC42BPA-207ENST00000441725 P0DMU3 169 aa2.9□□□□□ -1.94
CDC42BPA-207ENST00000441725 FAM231AP0DMU4 169 aa2.9□□□□□ -1.94
CDC42BPA-207ENST00000441725 FAM231CP0DMU5 169 aa2.9□□□□□ -1.94
CDC42BPA-207ENST00000441725 INSL3P51460 131 aa2.9□□□□□ -1.94
CDC42BPA-207ENST00000441725 HERVK_113P63121 156 aa2.9□□□□□ -1.94
CDC42BPA-207ENST00000441725 COA6Q5JTJ3 125 aaKnown RBP2.9□□□□□ -1.94
CDC42BPA-207ENST00000441725 GFI1BQ5VTD9 330 aa2.9□□□□□ -1.94
CDC42BPA-207ENST00000441725 Q6AWC8 147 aa2.9□□□□□ -1.94
CDC42BPA-207ENST00000441725 CLEC19AQ6UXS0 136 aa2.9□□□□□ -1.94
CDC42BPA-207ENST00000441725 CLEC20AQ6ZU45 233 aa2.9□□□□□ -1.94
CDC42BPA-207ENST00000441725 PRNTQ86SH4 94 aa2.9□□□□□ -1.94
CDC42BPA-207ENST00000441725 TSLPQ969D9 159 aa2.9□□□□□ -1.94
CDC42BPA-207ENST00000441725 SLC25A46Q96AG3 418 aa2.9□□□□□ -1.94
CDC42BPA-207ENST00000441725 ERMAPQ96PL5 475 aaPredicted RBP2.9□□□□□ -1.94
CDC42BPA-207ENST00000441725 GPX7Q96SL4 187 aaPredicted RBP2.9□□□□□ -1.94
CDC42BPA-207ENST00000441725 RPRMQ9NS64 109 aa2.9□□□□□ -1.94
CDC42BPA-207ENST00000441725 FUT9Q9Y231 359 aa2.9□□□□□ -1.94
CDC42BPA-207ENST00000441725 CSAG2Q9Y5P2 127 aa2.9□□□□□ -1.94
CDC42BPA-207ENST00000441725 NHSQ6T4R5 1651 aa2.9□□□□□ -1.95
CDC42BPA-207ENST00000441725 LAMA3Q16787 3333 aa2.9□□□□□ -1.95
CDC42BPA-207ENST00000441725 PRUNE2Q8WUY3 3088 aa2.9□□□□□ -1.95
CDC42BPA-207ENST00000441725 BTAF1O14981 1849 aa2.9□□□□□ -1.95
CDC42BPA-207ENST00000441725 FER1L6Q2WGJ9 1857 aa2.9□□□□□ -1.95
CDC42BPA-207ENST00000441725 SETXQ7Z333 2677 aaKnown RBP2.9□□□□□ -1.95
CDC42BPA-207ENST00000441725 LTN1O94822 1766 aa2.9□□□□□ -1.95
CDC42BPA-207ENST00000441725 A0A087WXM4 84 aa2.9□□□□□ -1.95
CDC42BPA-207ENST00000441725 TRGV10A0A0A0MS01 117 aa2.9□□□□□ -1.95
CDC42BPA-207ENST00000441725 A0A0J9YW62 118 aa2.9□□□□□ -1.95
CDC42BPA-207ENST00000441725 OR51F1A6NGY5 319 aa2.9□□□□□ -1.95
CDC42BPA-207ENST00000441725 PTHP01270 115 aa2.9□□□□□ -1.95
CDC42BPA-207ENST00000441725 VMA21Q3ZAQ7 101 aa2.9□□□□□ -1.95
CDC42BPA-207ENST00000441725 Q6ZUT4 128 aa2.9□□□□□ -1.95
CDC42BPA-207ENST00000441725 RAB2BQ8WUD1 216 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms