RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 IGHV1-2P23083 117 aa16.49■□□□□ 0.23
SHOX2-203ENST00000441443 TMEM178AQ8NBL3 297 aa16.49■□□□□ 0.23
SHOX2-203ENST00000441443 SNAI2O43623 268 aa16.48■□□□□ 0.23
SHOX2-203ENST00000441443 TOX4O94842 621 aa16.48■□□□□ 0.23
SHOX2-203ENST00000441443 ZNF138P52744 262 aa16.48■□□□□ 0.23
SHOX2-203ENST00000441443 IGKV1D-17A0A075B6S4 117 aa16.48■□□□□ 0.23
SHOX2-203ENST00000441443 FOXE3Q13461 319 aa16.48■□□□□ 0.23
SHOX2-203ENST00000441443 CT45A1Q5HYN5 189 aa16.48■□□□□ 0.23
SHOX2-203ENST00000441443 FAM231DQ6ZW35 169 aa16.48■□□□□ 0.23
SHOX2-203ENST00000441443 CT45A3Q8NHU0 189 aa16.48■□□□□ 0.23
SHOX2-203ENST00000441443 PEX7O00628 323 aa16.48■□□□□ 0.23
SHOX2-203ENST00000441443 ZNF137PP52743 207 aa16.48■□□□□ 0.23
SHOX2-203ENST00000441443 RPH3ALQ9UNE2 315 aa16.48■□□□□ 0.23
SHOX2-203ENST00000441443 PLCE1Q9P212 2302 aa16.47■□□□□ 0.23
SHOX2-203ENST00000441443 HSBP1L1C9JCN9 74 aa16.47■□□□□ 0.23
SHOX2-203ENST00000441443 CRXO43186 299 aaPredicted RBP16.47■□□□□ 0.23
SHOX2-203ENST00000441443 IGHV3-48P01763 117 aa16.47■□□□□ 0.23
SHOX2-203ENST00000441443 KIR2DS2P43631 304 aa16.47■□□□□ 0.23
SHOX2-203ENST00000441443 BPIFB3P59826 476 aa16.47■□□□□ 0.23
SHOX2-203ENST00000441443 RTL8BQ17RB0 113 aa16.47■□□□□ 0.23
SHOX2-203ENST00000441443 C12orf54Q6X4T0 127 aa16.47■□□□□ 0.23
SHOX2-203ENST00000441443 OR10W1Q8NGF6 305 aa16.47■□□□□ 0.23
SHOX2-203ENST00000441443 SSBP2P81877 361 aaPredicted RBP16.47■□□□□ 0.23
SHOX2-203ENST00000441443 ZNF329Q86UD4 541 aa16.47■□□□□ 0.23
SHOX2-203ENST00000441443 PLAUP00749 431 aa16.46■□□□□ 0.23
SHOX2-203ENST00000441443 ARFGEF3Q5TH69 2177 aa16.46■□□□□ 0.23
SHOX2-203ENST00000441443 SAP30O75446 220 aa16.46■□□□□ 0.23
SHOX2-203ENST00000441443 RIPPLY3P57055 190 aa16.46■□□□□ 0.23
SHOX2-203ENST00000441443 LHFPL4Q7Z7J7 247 aa16.46■□□□□ 0.23
SHOX2-203ENST00000441443 A0A1B0GXF2 115 aa16.45■□□□□ 0.22
SHOX2-203ENST00000441443 FNDC10F2Z333 226 aa16.45■□□□□ 0.22
SHOX2-203ENST00000441443 HIST1H1EP10412 219 aaKnown RBP16.45■□□□□ 0.22
SHOX2-203ENST00000441443 WT1P19544 449 aaPredicted RBP16.45■□□□□ 0.22
SHOX2-203ENST00000441443 SCRT2Q9NQ03 307 aa16.45■□□□□ 0.22
SHOX2-203ENST00000441443 CALYQ9NYX4 217 aa16.45■□□□□ 0.22
SHOX2-203ENST00000441443 SPTA1P02549 2419 aa16.45■□□□□ 0.22
SHOX2-203ENST00000441443 ZNF292O60281 2723 aa16.45■□□□□ 0.22
SHOX2-203ENST00000441443 SARAFQ96BY9 339 aa16.45■□□□□ 0.22
SHOX2-203ENST00000441443 PAXXQ9BUH6 204 aa16.45■□□□□ 0.22
SHOX2-203ENST00000441443 TMEM191AQ9H0A3 160 aa16.45■□□□□ 0.22
SHOX2-203ENST00000441443 CEP295Q9C0D2 2601 aa16.45■□□□□ 0.22
SHOX2-203ENST00000441443 AKAP13Q12802 2813 aa16.45■□□□□ 0.22
SHOX2-203ENST00000441443 IGKV1-16P04430 117 aa16.45■□□□□ 0.22
SHOX2-203ENST00000441443 RPS20P60866 119 aaKnown RBP16.45■□□□□ 0.22
SHOX2-203ENST00000441443 HBBP68871 147 aa16.45■□□□□ 0.22
SHOX2-203ENST00000441443 PGLYRP4Q96LB8 373 aa16.45■□□□□ 0.22
SHOX2-203ENST00000441443 MEGF9Q9H1U4 602 aa16.45■□□□□ 0.22
SHOX2-203ENST00000441443 SRRM4A7MD48 611 aaKnown RBP16.44■□□□□ 0.22
SHOX2-203ENST00000441443 PRCDQ00LT1 54 aa16.44■□□□□ 0.22
SHOX2-203ENST00000441443 C19orf24Q9BVV8 132 aa16.44■□□□□ 0.22
SHOX2-203ENST00000441443 VWA1Q6PCB0 445 aa16.44■□□□□ 0.22
SHOX2-203ENST00000441443 LINC00322Q6ZN03 302 aaPredicted RBP16.44■□□□□ 0.22
SHOX2-203ENST00000441443 ZNF835Q9Y2P0 537 aa16.44■□□□□ 0.22
SHOX2-203ENST00000441443 ANKRD11Q6UB99 2663 aaPredicted RBP16.44■□□□□ 0.22
SHOX2-203ENST00000441443 APC2O95996 2303 aa16.44■□□□□ 0.22
SHOX2-203ENST00000441443 TEX50A0A1B0GTY4 177 aa16.43■□□□□ 0.22
SHOX2-203ENST00000441443 K7ERU9 68 aa16.43■□□□□ 0.22
SHOX2-203ENST00000441443 F2RL2O00254 374 aa16.43■□□□□ 0.22
SHOX2-203ENST00000441443 FTH1P19P0C7X4 201 aa16.43■□□□□ 0.22
SHOX2-203ENST00000441443 OR2Z1Q8NG97 314 aa16.43■□□□□ 0.22
SHOX2-203ENST00000441443 ZNRD1Q9P1U0 126 aa16.43■□□□□ 0.22
SHOX2-203ENST00000441443 DCHS1Q96JQ0 3298 aa16.43■□□□□ 0.22
SHOX2-203ENST00000441443 PSMB11A5LHX3 300 aa16.43■□□□□ 0.22
SHOX2-203ENST00000441443 MGST3O14880 152 aa16.43■□□□□ 0.22
SHOX2-203ENST00000441443 C7orf69Q9H7B7 122 aa16.43■□□□□ 0.22
SHOX2-203ENST00000441443 PRNDQ9UKY0 176 aa16.43■□□□□ 0.22
SHOX2-203ENST00000441443 MUC6Q6W4X9 2439 aa16.43■□□□□ 0.22
SHOX2-203ENST00000441443 CD5LO43866 347 aa16.43■□□□□ 0.22
SHOX2-203ENST00000441443 COX7A2P2O60397 106 aa16.43■□□□□ 0.22
SHOX2-203ENST00000441443 DEFB109BQ30KR1 87 aa16.43■□□□□ 0.22
SHOX2-203ENST00000441443 BLNKQ8WV28 456 aa16.43■□□□□ 0.22
SHOX2-203ENST00000441443 NBASA2RRP1 2371 aa16.42■□□□□ 0.22
SHOX2-203ENST00000441443 GTSF1Q8WW33 167 aa16.42■□□□□ 0.22
SHOX2-203ENST00000441443 MRPL32Q9BYC8 188 aaKnown RBP16.42■□□□□ 0.22
SHOX2-203ENST00000441443 CSN3P07498 182 aa16.42■□□□□ 0.22
SHOX2-203ENST00000441443 RNASE2P10153 161 aaKnown RBP16.42■□□□□ 0.22
SHOX2-203ENST00000441443 HOXC12P31275 282 aa16.42■□□□□ 0.22
SHOX2-203ENST00000441443 CD69Q07108 199 aa16.42■□□□□ 0.22
SHOX2-203ENST00000441443 ATP5L2Q7Z4Y8 100 aa16.42■□□□□ 0.22
SHOX2-203ENST00000441443 PPIAL4DF5H284 164 aa16.41■□□□□ 0.22
SHOX2-203ENST00000441443 FAM201AQ5SY85 155 aa16.41■□□□□ 0.22
SHOX2-203ENST00000441443 MAP1LC3CQ9BXW4 147 aa16.41■□□□□ 0.22
SHOX2-203ENST00000441443 UPK2O00526 184 aa16.41■□□□□ 0.22
SHOX2-203ENST00000441443 SPRNQ5BIV9 151 aa16.41■□□□□ 0.22
SHOX2-203ENST00000441443 FAM71F2Q6NXP2 309 aa16.41■□□□□ 0.22
SHOX2-203ENST00000441443 CHRDL1Q9BU40 450 aa16.41■□□□□ 0.22
SHOX2-203ENST00000441443 C1RLQ9NZP8 487 aa16.41■□□□□ 0.22
SHOX2-203ENST00000441443 TPRP12270 2363 aaKnown RBP16.41■□□□□ 0.22
SHOX2-203ENST00000441443 ATMQ13315 3056 aa16.41■□□□□ 0.22
SHOX2-203ENST00000441443 PKDREJQ9NTG1 2253 aa16.41■□□□□ 0.22
SHOX2-203ENST00000441443 C7orf71A4D174 169 aa16.4■□□□□ 0.22
SHOX2-203ENST00000441443 GPR183P32249 361 aa16.4■□□□□ 0.22
SHOX2-203ENST00000441443 C17orf58Q2M2W7 97 aa16.4■□□□□ 0.22
SHOX2-203ENST00000441443 C10orf113Q5VZT2 155 aa16.4■□□□□ 0.22
SHOX2-203ENST00000441443 PATE2Q6UY27 113 aa16.4■□□□□ 0.22
SHOX2-203ENST00000441443 CHCHD1Q96BP2 118 aaKnown RBP16.4■□□□□ 0.22
SHOX2-203ENST00000441443 APOA2P02652 100 aa16.4■□□□□ 0.22
SHOX2-203ENST00000441443 UQCRFS1P47985 274 aa16.4■□□□□ 0.22
SHOX2-203ENST00000441443 HIST1H1AQ02539 215 aaPredicted RBP16.4■□□□□ 0.22
SHOX2-203ENST00000441443 C2orf83Q53S99 150 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms