RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 GLMPQ8WWB7 406 aa13.15□□□□□ -0.3
GTF3A-204ENST00000438571 GRAMD2BQ96HH9 432 aa13.15□□□□□ -0.3
GTF3A-204ENST00000438571 RTBDNQ9BSG5 229 aaPredicted RBP13.15□□□□□ -0.3
GTF3A-204ENST00000438571 PRR13Q9NZ81 148 aa13.15□□□□□ -0.3
GTF3A-204ENST00000438571 CELA1Q9UNI1 258 aa13.15□□□□□ -0.3
GTF3A-204ENST00000438571 ZNF705EA8MWA4 302 aaPredicted RBP13.14□□□□□ -0.31
GTF3A-204ENST00000438571 HLA-DMBP28068 263 aa13.14□□□□□ -0.31
GTF3A-204ENST00000438571 SPCS3P61009 180 aa13.14□□□□□ -0.31
GTF3A-204ENST00000438571 USF2Q15853 346 aaPredicted RBP13.14□□□□□ -0.31
GTF3A-204ENST00000438571 PRSS54Q6PEW0 395 aa13.14□□□□□ -0.31
GTF3A-204ENST00000438571 SELENOHQ8IZQ5 122 aaKnown RBP13.14□□□□□ -0.31
GTF3A-204ENST00000438571 AP3S1Q92572 193 aa13.14□□□□□ -0.31
GTF3A-204ENST00000438571 GPR146Q96CH1 333 aa13.14□□□□□ -0.31
GTF3A-204ENST00000438571 TMEM222Q9H0R3 208 aa13.14□□□□□ -0.31
GTF3A-204ENST00000438571 NAA60Q9H7X0 242 aa13.14□□□□□ -0.31
GTF3A-204ENST00000438571 CACNG5Q9UF02 275 aa13.14□□□□□ -0.31
GTF3A-204ENST00000438571 CDS2O95674 445 aa13.13□□□□□ -0.31
GTF3A-204ENST00000438571 SPP1P10451 314 aa13.13□□□□□ -0.31
GTF3A-204ENST00000438571 DHRS2Q13268 280 aa13.13□□□□□ -0.31
GTF3A-204ENST00000438571 C16orf54Q6UWD8 224 aa13.13□□□□□ -0.31
GTF3A-204ENST00000438571 ZNF767PQ75MW2 155 aa13.13□□□□□ -0.31
GTF3A-204ENST00000438571 CSNK1G2-AS1Q8NCQ2 148 aa13.13□□□□□ -0.31
GTF3A-204ENST00000438571 HRH4Q9H3N8 390 aa13.13□□□□□ -0.31
GTF3A-204ENST00000438571 DYNC1H1Q14204 4646 aaKnown RBP13.12□□□□□ -0.31
GTF3A-204ENST00000438571 TEX13DA0A0J9YY54 714 aaPredicted RBP13.12□□□□□ -0.31
GTF3A-204ENST00000438571 GABARAPH6UMI1 98 aa13.12□□□□□ -0.31
GTF3A-204ENST00000438571 HNRNPCP07910 306 aaKnown RBP eCLIP13.12□□□□□ -0.31
GTF3A-204ENST00000438571 MIFP14174 115 aa13.12□□□□□ -0.31
GTF3A-204ENST00000438571 HTR2BP41595 481 aa13.12□□□□□ -0.31
GTF3A-204ENST00000438571 DHODHQ02127 395 aa13.12□□□□□ -0.31
GTF3A-204ENST00000438571 C2orf83Q53S99 150 aa13.12□□□□□ -0.31
GTF3A-204ENST00000438571 PSMG4Q5JS54 123 aa13.12□□□□□ -0.31
GTF3A-204ENST00000438571 GPR107Q5VW38 600 aa13.12□□□□□ -0.31
GTF3A-204ENST00000438571 MORN3Q6PF18 240 aaPredicted RBP13.12□□□□□ -0.31
GTF3A-204ENST00000438571 SLC24A4Q8NFF2 622 aa13.12□□□□□ -0.31
GTF3A-204ENST00000438571 OR52E5Q8NH55 327 aa13.12□□□□□ -0.31
GTF3A-204ENST00000438571 RBPMSQ93062 196 aaKnown RBP13.12□□□□□ -0.31
GTF3A-204ENST00000438571 SCRT1Q9BWW7 348 aa13.12□□□□□ -0.31
GTF3A-204ENST00000438571 HEYLQ9NQ87 328 aaPredicted RBP13.12□□□□□ -0.31
GTF3A-204ENST00000438571 CTDSP2O14595 271 aa13.11□□□□□ -0.31
GTF3A-204ENST00000438571 OR10J1P30954 320 aa13.11□□□□□ -0.31
GTF3A-204ENST00000438571 TMEM268Q5VZI3 342 aa13.11□□□□□ -0.31
GTF3A-204ENST00000438571 GSG1LQ6UXU4 331 aa13.11□□□□□ -0.31
GTF3A-204ENST00000438571 FAM219AQ8IW50 185 aa13.11□□□□□ -0.31
GTF3A-204ENST00000438571 OR4C16Q8NGL9 310 aa13.11□□□□□ -0.31
GTF3A-204ENST00000438571 OR1S2Q8NGQ3 325 aa13.11□□□□□ -0.31
GTF3A-204ENST00000438571 RAB40CQ96S21 281 aa13.11□□□□□ -0.31
GTF3A-204ENST00000438571 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.11□□□□□ -0.31
GTF3A-204ENST00000438571 C14orf166Q9Y224 244 aaKnown RBP13.11□□□□□ -0.31
GTF3A-204ENST00000438571 PKHD1P08F94 4074 aa13.1□□□□□ -0.31
GTF3A-204ENST00000438571 IGHV4-4A0A075B6R2 117 aa13.1□□□□□ -0.31
GTF3A-204ENST00000438571 TRAV30A0A087WSZ9 112 aa13.1□□□□□ -0.31
GTF3A-204ENST00000438571 RPS10-NUDT3A0A1W2PQS6 291 aa13.1□□□□□ -0.31
GTF3A-204ENST00000438571 CRYM-AS1A6NIL9 109 aa13.1□□□□□ -0.31
GTF3A-204ENST00000438571 CEBPZOSA8MTT3 80 aa13.1□□□□□ -0.31
GTF3A-204ENST00000438571 C11orf94C9JXX5 98 aa13.1□□□□□ -0.31
GTF3A-204ENST00000438571 IL4P05112 153 aa13.1□□□□□ -0.31
GTF3A-204ENST00000438571 DEFB1P60022 68 aa13.1□□□□□ -0.31
GTF3A-204ENST00000438571 NARS2Q96I59 477 aaKnown RBP13.1□□□□□ -0.31
GTF3A-204ENST00000438571 HELTA6NFD8 242 aa13.09□□□□□ -0.31
GTF3A-204ENST00000438571 FAM90A26D6RGX4 464 aa13.09□□□□□ -0.31
GTF3A-204ENST00000438571 RGS5O15539 181 aa13.09□□□□□ -0.31
GTF3A-204ENST00000438571 SCGB2A1O75556 95 aa13.09□□□□□ -0.31
GTF3A-204ENST00000438571 TCTAP57738 103 aa13.09□□□□□ -0.31
GTF3A-204ENST00000438571 YPEL3P61236 119 aaPredicted RBP13.09□□□□□ -0.31
GTF3A-204ENST00000438571 SPCS2Q15005 226 aa13.09□□□□□ -0.31
GTF3A-204ENST00000438571 TMEM41BQ5BJD5 291 aa13.09□□□□□ -0.31
GTF3A-204ENST00000438571 Q8WTZ3 238 aa13.09□□□□□ -0.31
GTF3A-204ENST00000438571 NPIPB3Q92617 1050 aa13.09□□□□□ -0.31
GTF3A-204ENST00000438571 TBC1D24Q9ULP9 559 aa13.09□□□□□ -0.31
GTF3A-204ENST00000438571 GPR132Q9UNW8 380 aa13.09□□□□□ -0.31
GTF3A-204ENST00000438571 TRAV10A0A0B4J240 114 aa13.08□□□□□ -0.32
GTF3A-204ENST00000438571 B3GALNT1O75752 331 aa13.08□□□□□ -0.32
GTF3A-204ENST00000438571 SLC25A4P12235 298 aa13.08□□□□□ -0.32
GTF3A-204ENST00000438571 NPY1RP25929 384 aa13.08□□□□□ -0.32
GTF3A-204ENST00000438571 RNASEH2CQ8TDP1 164 aaKnown RBP13.08□□□□□ -0.32
GTF3A-204ENST00000438571 SMIM4Q8WVI0 70 aa13.08□□□□□ -0.32
GTF3A-204ENST00000438571 ACY3Q96HD9 319 aa13.08□□□□□ -0.32
GTF3A-204ENST00000438571 NACAE9PAV3 2078 aa13.08□□□□□ -0.32
GTF3A-204ENST00000438571 C12orf74Q32Q52 190 aa13.07□□□□□ -0.32
GTF3A-204ENST00000438571 GDF5OSQ5U4N7 250 aa13.07□□□□□ -0.32
GTF3A-204ENST00000438571 XCL2Q9UBD3 114 aa13.07□□□□□ -0.32
GTF3A-204ENST00000438571 TMEM56-RWDD3S4R434 201 aa13.07□□□□□ -0.32
GTF3A-204ENST00000438571 DISC1C4P0D8 188 aa13.06□□□□□ -0.32
GTF3A-204ENST00000438571 BUB3O43684 328 aa13.06□□□□□ -0.32
GTF3A-204ENST00000438571 TOMM40O96008 361 aa13.06□□□□□ -0.32
GTF3A-204ENST00000438571 AKAIN1P0CW23 69 aa13.06□□□□□ -0.32
GTF3A-204ENST00000438571 SURF2Q15527 256 aaPredicted RBP13.06□□□□□ -0.32
GTF3A-204ENST00000438571 NMSQ5H8A3 153 aa13.06□□□□□ -0.32
GTF3A-204ENST00000438571 SIGLEC15Q6ZMC9 328 aa13.06□□□□□ -0.32
GTF3A-204ENST00000438571 OR51S1Q8NGJ8 323 aa13.06□□□□□ -0.32
GTF3A-204ENST00000438571 OR51G1Q8NGK1 321 aa13.06□□□□□ -0.32
GTF3A-204ENST00000438571 C15orf40Q8WUR7 153 aa13.06□□□□□ -0.32
GTF3A-204ENST00000438571 NRN1Q9NPD7 142 aa13.06□□□□□ -0.32
GTF3A-204ENST00000438571 DNAH11Q96DT5 4516 aa13.05□□□□□ -0.32
GTF3A-204ENST00000438571 H3BMM0 161 aa13.05□□□□□ -0.32
GTF3A-204ENST00000438571 PSG1P11464 419 aa13.05□□□□□ -0.32
GTF3A-204ENST00000438571 EIF2B2P49770 351 aaKnown RBP13.05□□□□□ -0.32
GTF3A-204ENST00000438571 FXYD7P58549 80 aa13.05□□□□□ -0.32
GTF3A-204ENST00000438571 SSBP1Q04837 148 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms